Mya arenaria (softshell): 128227732
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Entry
128227732 CDS
T09995
Name
(RefSeq) transcription factor SPT20 homolog isoform X1
KO
K21245
transcription factor SPT20 homolog
Organism
maea
Mya arenaria (softshell)
Pathway
maea04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128227732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
maea03036
]
128227732
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
128227732
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
128227732
NCBI-ProteinID:
XP_052794494
LinkDB
All DBs
Position
3:complement(44812286..44837656)
Genome browser
AA seq
990 aa
AA seq
DB search
MNSFERAVDYAEYLVELGRQNPAALVKNPPSASSKGKSIHQKLLDLYIEETGKQQDDQKL
QCNTHLLRKLVRREKLNCLILNLYPGNEGYSLMLRSKAGIETETCKLPYEVTELLDYIDD
SELPPFLVDVLEKAQVNVFYSGCVIVEIRDFRRATNGTFDMQYVLLKPNPQTLLCDINNL
TSDGHVWTQEDLYMLEGKLLLATEEPLCLDPSPAVALVANRQQYDRNKLNTPQLKRPVKK
YTQAAMNRKRKFALSSAPRELQLHEFIAKKKEKKTSAAAKLGKACVDFWKQKAVSLVPPD
SVDVDKFARVMDKPDKRLIMENSLALVEEQVLERDGVQDKKLLAKLTIYHRPLDDAHIGE
LYLDHDYVEDKSKGATCRFLLGNKDSVRKYLDQFREIFTEEGRRAVKITTQRPGQPPQVT
CTQTTPTNLPVTSVPGSVSGAKTSTSSTQQAMEVSPVAGMGGVGMKRTMPIQLALSIGPT
GTPNPPGQAVFTQQATPNQAPNQIQLSMPTNLNQSPVGGMRLPLQIASQPQSASQRLKQL
GIHTSIAPSASPSTQQPPIAQLFGSQPGQTPTMLAQQPGLSPQIAQGGRTPSHTPTPTPP
PPIMSPPTQLGRKSSLTAESSTIHHMAQTAHQTNHASLVQGDGSASASSTPTVSHPQQQQ
QQQQQQQAAPQGGVVNINLGNSSNITGIPPNINIQNLTGLPGMNIANLQGLQNMQVSLSV
HGGLAVPISMISANHQGIIVSSAGAHQNSQGGTPSMQGHQQGQTSVVTMTTHHLVNTSTS
TVTSVPVSHVVTGVISQGGSNVMSGTGMLSVPINLGPGLVQQGLKSAGQIRASSSMPLQL
QFGQQGIQFVNLQQQRTTLKPGAGLQPGQTLGTMGVRPSTSIQGPLTTTILSNPGLSGGQ
QVLSHLSLQGKPGPGGGITTTLTPQQLVQLQPQFQIQQTFQRSGLQQATGQPTQQLQFHQ
ILKQQPPQSPMTFGGKPKAKKRTTPTPPKQ
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgaactcctttgaaagggctgttgattatgctgagtatctggtggagcttggcagacag
aacccagcagcccttgttaaaaatccaccatccgcgtccagcaaagggaagtccatccac
cagaagctgttggacctgtacatagaggagacaggcaaacagcaggatgaccagaagctg
cagtgtaacacccatctgctgcggaagctggtacgtcgggagaagctgaactgcctcatt
ctgaacctgtatccaggcaacgagggttactcgctgatgctacgcagcaaggcagggatc
gagactgagacttgcaaactaccgtatgaggttactgagttgttggattacatagatgac
tctgagcttcctcctttcctggttgatgtcttggaaaaggctcaggtgaatgttttctac
agtggctgtgtgatagtagagatcagagacttccggcgggccacaaacgggacatttgat
atgcagtatgtcctcctgaaacccaatccacagaccctgctgtgtgatataaacaacctg
acatcagacggacatgtgtggactcaggaggacctgtacatgttggaggggaagttgcta
ttggcgacagaggaacccctgtgtctagacccctccccagcagtcgcccttgtggccaat
aggcagcagtatgatagaaacaagctgaacacgccacaactgaaaaggccagttaaaaag
tacacgcaggctgcgatgaacaggaagcggaagtttgcccttagttctgcccctcgagaa
ctacagctgcacgagttcatcgccaagaaaaaagagaaaaagacatcagctgctgctaaa
cttgggaaagcgtgtgtagacttctggaagcagaaggctgtgagcctggtaccgcctgac
agtgtagatgtggacaagtttgcccgcgtcatggacaagccagacaagaggcttatcatg
gaaaactctctggcactggtagaagagcaggtattggaaagggacggggtccaggataag
aaactactggccaaactgaccatctatcatagacccctggacgacgcccacatcggggaa
ctgtacttggaccatgattacgtggaggataagtccaagggggccacatgcagatttctg
cttggtaataaagattcagttagaaagtaccttgaccagttccgggagatattcacggag
gagggtcggcgggctgtgaagatcaccacccagaggcctggccaaccaccccaggtgacc
tgtacccagaccacacctacaaacctccctgtcacatctgttcctggtagtgtgagcggt
gccaaaacctccacgtcttccacacagcaggctatggaggtgtccccagttgcaggaatg
ggtggggttggaatgaagaggacgatgcccatacagctggctctgtccattgggcccaca
ggcactcccaaccccccaggtcaagcagtatttacacaacaggccacaccgaaccaggcc
cctaaccagatccagctgagtatgcccaccaatttaaaccagtcacctgtgggcggaatg
aggctacccttgcagatagccagtcagccccagtcggcatcccagcgtctcaagcagctt
ggcattcacaccagtattgccccctccgccagtccctccacacaacaaccacccatagca
caattgtttgggagccagcccggacagacaccaaccatgcttgcccagcagcctggcctc
tctccccagattgcccaagggggtcgcaccccgagtcacacccccactccaaccccaccc
ccacccatcatgtcacccccaacccagcttggccgcaagtcaagccttaccgcagagtcc
tccaccattcaccacatggcccagacggcacatcagaccaaccacgcttcactcgttcaa
ggtgacggctctgcttcagcatcctccactcccactgtgagccacccgcaacaacaacag
caacaacagcagcagcagcaggcagcaccacagggtggggtagtgaacatcaaccttggc
aacagctccaacatcacgggcatccctcccaacatcaacatacagaatctcacagggctc
cctggcatgaacatcgccaacctacagggccttcagaacatgcaggtgtcattgtccgta
catggaggtttagctgtgcccattagtatgatcagtgccaaccaccaaggcatcattgtc
tcatctgctggagcccatcaaaactcacagggtggtactccttccatgcaaggtcatcag
cagggtcagacaagtgtggttaccatgacaacccatcaccttgtcaacacgtcaacctcc
acagtgacatcagtcccagtctcacatgttgtcactggtgtgataagccagggtggtagc
aatgtgatgtcgggcacagggatgttgtctgtgcccattaaccttggtccagggctggta
caacagggcctaaagtctgcaggacagatcagggcctcatcttcaatgcccctacagcta
cagtttggacagcagggtatccagtttgtgaaccttcagcagcagcggaccaccctgaag
cctggggcaggactccagcctggccagaccctggggacaatgggggtcagaccctcaacc
tccatacaggggccactcaccacaaccatcctatcaaatccgggtctgagtggaggtcaa
caggtgctctctcacctgtcccttcagggcaagcccgggccaggcggaggcatcaccacc
accctcacaccccagcagcttgtacagctacaaccacagttccaaatacaacaaactttc
cagaggtcaggtttgcagcaggcgaccggccagccaactcagcagcttcaatttcaccag
atcctgaagcaacagccaccacagtcccccatgaccttcggaggaaaacccaaggccaag
aaacgaaccacaccaactccacccaaacaatga
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integrated database retrieval system
