Mya arenaria (softshell): 128227783
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Entry
128227783 CDS
T09995
Name
(RefSeq) extracellular matrix protein 3-like
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
maea
Mya arenaria (softshell)
Pathway
maea04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128227783
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
maea04091
]
128227783
Lectins [BR:
maea04091
]
C-Type lectins
Lecticans
128227783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Calx-beta
Frem_N
Motif
Other DBs
NCBI-GeneID:
128227783
NCBI-ProteinID:
XP_052794592
LinkDB
All DBs
Position
3:complement(56319109..56405847)
Genome browser
AA seq
3063 aa
AA seq
DB search
MGGLQLTVVIKISFIVILGLLLVECRLHKSEIIRVNRQVDVPFGRSVTLNPLKDLNIHVK
HGDSCSLNIVKRDNLPYSAGQLSKSEFPCRFSTGDLTYIHYGRIYGVDKFLTLLQYNSQN
ETFITQFVIQFNIIEKPYEIVTKNVAVQVNSYSDVSSPIDSSALQFSFDESINSCFISVL
PQSLGLPQFGELLNKTLSNIDCEEFLTSDIRYRYYAHKSVPKHDNIPMQVKLLTKLGELV
KDEYFQLEVLISSGRDNTPPEPSDKAKFIMDSVSQSILTPITVDILSATDGQTQSDKLMF
NISQPLGPGEGIIINTDNADEPINHFFQYEVNDLKIAYKPTKFDSNIKRIFQIWISIVDP
EGLASDSLPLMIVVEPMSTNAPVVTENMGMFLIEGQSRPIISPDMLEISHVGNLESVRIY
HIDGLRHGHLTLPAGRNYFTPEDLKHGLVVYHHDDSDSLSDNIVFQLSDGQNVITFLFPV
TIYPKDDKSPILTVNKGLDIQKNDIALISSLDLSASDTDTDDSDVIFVLEPPYSSRGLII
KKQPEKPSDTNEWHFHNGFYVQIVYNFTQLDILKGKMFYKHAGSQSNEAFMDDRIRFKII
DKGIPPNKSPVHEIHVRIQPIDEIPPYLYPNTKLELDVTGNGCTPFNKKNLRFTDDDTND
RTIMYTIKRQPYDTYDYGPLEAGTVAYCDNSDRNLTQFSQADINQHKVCYLPPATGLGLA
KRTLQFDFNVEDQSENILTNQVFTIIIKPVNSVPPVVINTGAEVVVNGEIVITPQMLFVK
DTDPQNIVIIMSKLPQFGILYNNGTVIETDKTFSPFDIEMGKIVYRNQEHDESFKDMFMV
EISDGIHFIPVTFYVNIVKRSEVLFQRNSVADNGKLTIYHIVNENGTVILSPEHFKIYDT
SLNPRDIVYSIQKYPLFGSILLNGQGSSYFTQNDILNRKITYTHTGSDIGRSKAEDRIKL
VVLGTSNVLLKDGSILERIELVFEIQPVNNQLPEIITHDDIEVAEGRTVQLRREHIDVND
IDSEEGTIMCMITEQPKNGFLENKSPGSRAGLPISAFNVDNIRNGDIFYVQNVHKGIEPR
SDQFYIKCSDGRNLSGDKKISIAILPANDEVPGVIVREFIGSEGMDIRIDAAILEVTDKD
EPADELNVLIVTPPKHGKIVQQSLTGEVQVQNFTLDKIKEFSTIVYEHDGSETTNDVFVF
VLSDGIHNVTRTVSITIFLIDDEPPRLAVNNGLEIESLGDKKTITNEMLKAVDVDSLVSN
LTFIIKKIPQYGVLTKTVQNTKVNLIYGSNFTQTDIDNNLVEYIHFGKKMKLDLIKFDVT
DGLNSLINRYFYVTFKGINLLQPDVFNTALFLQNDGGVTLTRAILTNSEIKVSEELLFNI
TVPPKHGHLEYVDQSGEKLSNFLFQYLDSNKVRYVHRNEDEVKFDVFEVEVSDDKKPMAK
TLRISISGQDNNLPVVMVTTLRLKEGTNKILTPLELRVFDVDTADEDVVFTITQVPLHGN
LLYNLSRIVTRFSQSDLKKGLISYQHDGSETFSDSLIFTVSDGLHQHFYIPGSDMPLRTP
QEMDIEIIPMSSGAPRVVVNTGSNFLTNLTNGLGFHITNRNLKSQDYDSPDDALRYMLTV
GPQHGFLQNTAQGGGAIAMWTQGDIDAWLIQYILSPGENATSDSFFFKVTDQEGHSLENQ
PFHLQWAWLSFKTDSYHGNETDGYIDVTLQRRGYLGETSLVTVEVHEKTASFGTDVSRQF
AQMIQFNPGQKEKQWRLAIKDDNVFEGEEILTLQLANPLSAVLEHPYVAMVTLHDAEDEA
KVCFEGLNYQVMENASHIDIPIMRTGDISQELTVICLTRDGTARGSPTSKIEPFSDFITR
PADHSSIVRFARGDSQNVCRVMLLNDSLYESQKRFYMVLKEPVGGKLGSRAETEITILPD
PADEPVFYFDQAHYTVDESAGTLEVKVWKTGTDLSKPSSITVHSRSMGNNPAEVGLDYLP
VTRILDFSPGEMTKTLRVAILDDSASPQLEGQKTLELYFRIPVGGRVGQPSTAVVTIDDS
VSDLPKMQFKAAEYRVLESDLQVVAKVTRSGDISSQSEVRCYTRPITAKGDMDFVERPDS
EDSLVVFLPGQIEADCHIQLVDDTVQEHEESFRLVLGTPDSLLPGGATLGGQVTTHIVVD
DPEDNPIIMFELNEYTVNEPIIKGDVTIAHISVVRLGDTEGTSVVQVTTRSGSALAGKDF
RNYDRVINFGPGVSHQAVELEILYDMSGEDREMFTVHMSEDTHRIAQVRHDEAVVYIEEN
SKLADIKLPLAPLIVSLRDLDLVASDFKRRPIQGYPLVCVSSCSPYHPQFLSVQDVCREA
GIDDVQTKFRWRVGQAGGVLFDLDSDTIFTTTRGVTLDSIYFTAGSQVECYARAVNFEGE
PGIEVASPVMTVDQSQGACPSRSDSVTLAEPFGARMGYTGPDDEWHPNKVHVRVQIPHTD
GMLPVISTRKMANYELTLNDDGSHRNKHQCTNLLKSGGIGAGFGVNHHDLMGFYGSSLPY
QYSEMLRSNKTLALYRNLDMSSCLWTFDAYYNMSELVSMCGALMETDSQMPGSPLSLVVV
KLPLFVSYLYFNPGTRDTWRAHEVSRYLTLKFVYGTGTMWDQAILSHRHPAGLKAEMFPS
GVQILEDGRLVVRFQTVPKFRGQFLASHPGNQFNSNVQSLSHGGVTFDLQLLPGPNTSVR
PHQNWRVTSATALRDYSGDFVVTLLPCLLTFTQTSTQPISCSPSDNVTFSLPIRLQQVSD
PVPSKFSLNTEFRVTRKSDVWLSEKLSYISEDDMTITPGDTVYGRLDVSPIQSLDRSVHL
YIEKVFMCAGQRGYIPLYNPDIGHYGCVGNSEQLDTVIRILDIEDPSSVNATFQGVPLSA
KMAHDDTQSSDVFNIPGADGFSFESSPLFQTEDEKLWFLHIVFSQTATNGDVISRTSMFD
SHNVRRSLDDIAGVGNGEKGTNMAPLILNFNGKSLKEDQYQPGKKTENSESQMPLIAALI
GASVLLLIGIIVLVIYIRHRRKQTSPPPTPSGTITVLSTSPGLTKVISNAYVFKPHPLYH
SEV
NT seq
9192 nt
NT seq
+upstream
nt +downstream
nt
atgggtggattacaattgacagttgtgatcaagatttcattcattgtgatactcggtttg
ttacttgtggaatgtagactacacaaaagtgagataattcgtgttaataggcaagtggat
gttccttttggccgtagtgtaactttaaaccccttaaaggacttgaatatacatgttaag
cacggggactcgtgctctttgaatattgtgaaacgagacaatttgccatacagtgcagga
caactaagcaaatctgaatttccttgcagatttagtactggagatttaacttacattcac
tatgggaggatatatggtgttgacaaatttcttacattgcttcaatacaattcacagaat
gagacatttatcactcagtttgtcattcagttcaatatcattgaaaaaccatatgagatt
gttaccaaaaatgttgcggtacaagtaaatagctattctgatgtcagctcaccaatagat
tcatcagcacttcagttttcatttgacgaaagcattaattcatgcttcattagtgtttta
ccacaatctcttggactacctcaatttggtgagttgctgaacaaaaccttatctaacatt
gactgtgaagaatttttgacttctgatataaggtatagatactatgcacataaaagtgta
ccgaaacatgacaatattcctatgcaggtaaaacttctgacaaaacttggagaacttgta
aaggatgaatattttcagttggaagtactgatatcctctggtagagacaacactccaccg
gaacccagcgataaagccaaattcataatggattcagtcagccagtccatccttacacca
atcactgttgacattttgtcagctactgatggacagacacagtcggacaaacttatgttt
aacatttctcaaccactaggccccggtgaaggaattatcattaatacggataatgcagat
gaaccaattaaccacttctttcagtatgaagttaatgatctcaaaattgcttataagcca
acaaaatttgattcaaacatcaagagaatttttcagatatggatttctattgtggaccca
gagggcctggcctcagattcattgccattgatgattgttgttgaaccaatgagtacaaat
gcacctgttgttactgaaaatatgggcatgttcttaattgaaggtcaatcaagaccaatt
ataagcccagatatgcttgaaatctctcatgtgggtaacttagaaagtgtcagaatatat
cacattgatggattgcggcatggtcacttgactctcccagctgggagaaattatttcaca
cctgaggatctaaaacatggactagtggtttatcatcatgatgacagtgattcactcagt
gacaatatagtcttccagctttctgatggacaaaatgtgattacatttttatttccagta
accatttatccaaaagacgacaaatctcctatcttgactgttaacaaaggtcttgatatc
cagaaaaatgacatagcattgatttcatctttagatttgtcagcttcggacactgacact
gatgacagtgatgtcatctttgttcttgaaccgccctattcaagtcgaggattgatcata
aaaaagcagccagaaaaaccatcagatacaaatgaatggcattttcataatggattttat
gtgcaaatagtatacaactttactcagctggatattttgaaaggaaaaatgttttataag
catgcaggatctcaatctaatgaagcttttatggatgacagaatcagatttaaaataata
gataagggtataccaccaaataagtcccctgttcatgaaatccatgttagaatacagcca
attgatgagataccaccttatttgtatccaaacacaaagcttgaattagatgtcactgga
aatggatgtacaccctttaacaagaaaaatttaagatttactgacgatgacacaaatgac
cggacaattatgtacaccataaaaaggcagccgtatgatacgtatgattatgggccgtta
gaagctggtacagttgcttattgcgataactctgacagaaatcttacacaatttagccaa
gctgacataaaccaacacaaagtttgctacctaccaccagcaacaggacttggacttgca
aaaagaacactgcaatttgactttaatgttgaagaccagtctgaaaacattctgacaaat
caggtgttcaccattattattaagccagtgaatagtgttccaccagtggttattaacact
ggagctgaggttgttgtaaatggtgaaattgtgataactccacagatgttatttgtcaaa
gatactgacccacagaatattgttatcatcatgagtaaacttccacagtttggtattttg
tataacaatggaactgtaattgaaacagataaaaccttttccccttttgacattgaaatg
ggtaaaattgtgtacagaaatcaagaacatgatgaaagtttcaaagatatgttcatggta
gaaatatctgatggtatacatttcattcctgtgacattctatgtaaacattgttaaaaga
agtgaagtactcttccaaagaaattctgttgctgataatggtaaacttactatctatcat
atagtgaatgaaaatggtacagttattttaagtcctgaacattttaaaatatatgataca
tccctcaacccaagagatattgtgtattctattcaaaagtacccattgttcggttcaata
ttattaaacgggcaaggaagcagttatttcacacaaaatgacattttaaacagaaagatt
acttacacacatactggctcagatattggaagaagtaaagcggaggacagaatcaagctt
gtagttcttggtacgtcaaatgttttactaaaagatgggtccatacttgaaagaattgaa
ttagtttttgaaattcaaccagtaaacaatcaactgcctgaaatcattacacatgatgat
atagaggttgctgaaggaagaactgtacaactacgaagggaacatattgatgttaatgat
attgactcagaagaaggtactataatgtgtatgataacagaacaacctaaaaatggattt
cttgaaaataaatcaccaggttcaagggctggattacccatatcagcatttaatgtagat
aatatcaggaatggtgacatattttatgtacagaatgttcacaaaggtatagaaccaaga
agtgatcagttctatataaaatgttcagatgggagaaaccttagtggtgacaagaaaata
tctattgctatacttccagcaaatgatgaagttcctggagtaattgtgagggaattcatt
ggctctgaaggcatggacataagaatagatgctgcaatactagaggtgactgataaagat
gaacctgctgatgagttgaatgttcttattgtcactcctcctaaacatggtaaaattgta
cagcaatccctaactggtgaagtccaagtacaaaatttcactcttgacaaaatcaaagaa
ttttctacgattgtgtatgaacatgatggctctgagactactaatgatgtgtttgtgttt
gttctgtcagacggtattcacaatgtcacaaggactgtctcaataactatatttctaatt
gatgatgagccgccgagacttgctgtaaacaatggacttgaaatagagagcttgggagac
aaaaagactatcacaaatgaaatgctgaaggctgtggatgttgactctttggtcagtaac
cttacatttataatcaaaaagattccacaatatggtgtcctgacaaaaactgtccaaaat
acaaaagtgaacctgatttatgggtctaacttcacacagacagacattgataacaatctt
gtggaatatatccattttggcaaaaaaatgaaattagacttgatcaagtttgatgtgaca
gatggtttgaactcacttattaacagatatttctatgtgacatttaaaggcattaacctg
cttcaacctgatgtttttaatacagctctatttctgcaaaacgatggaggtgtaacatta
actagggctattctgactaactctgagataaaagtatctgaggaactacttttcaacatt
actgttccaccaaaacatggccatttagaatatgttgatcagagtggtgaaaaactttcc
aacttcttgttccaatatttagattctaacaaagtaagatatgttcaccggaatgaagat
gaagttaagtttgacgtctttgaagtagaagtaagtgatgataaaaaaccaatggccaaa
actttacgaatttcaatcagtggacaggacaataatttacctgttgtcatggttacaact
cttagactaaaagaaggaacaaataaaatactaacgccactggaactcagggtctttgat
gtggacactgctgatgaagatgtggtttttaccataacacaagtgcctttacatggaaat
ctgctgtacaacctctctagaatagtgacaaggttctctcaaagtgaccttaagaagggc
ctcatatcttaccagcatgatggaagtgaaacattttcagacagtttaatatttaccgtc
tctgatggcttacaccaacatttttacataccagggtctgacatgcctctccgtacaccc
caggaaatggacatagaaataatacccatgagcagtggagcccctagagtagtggtcaac
acagggtctaacttcttgaccaacttaaccaatggtttagggtttcacataactaacaga
aatctaaaaagccaagactatgacagcccagatgatgcactacgatacatgttgactgtc
ggaccacaacatgggttcttgcaaaacactgcacagggaggtggagctattgccatgtgg
acacaaggggatatagatgcatggcttatccagtacatcctctcccctggggaaaacgcc
accagtgacagcttcttcttcaaggtcacagatcaagagggccattccttggaaaaccaa
cccttccacctacagtgggcatggctatctttcaagactgacagttaccatggtaatgag
acagatggctacatcgatgtcaccctacagagaaggggttaccttggagaaacaagtctt
gtcactgttgaggtgcatgagaagactgcgtcctttggtacagatgtgtccaggcaattt
gctcagatgatccagtttaacccaggtcagaaggagaagcagtggagactggccattaag
gatgacaatgtatttgagggagaggagattctaacactgcagcttgctaaccccctttct
gctgtccttgaacatccttatgttgccatggtcaccctgcatgatgcagaagacgaggca
aaggtgtgttttgagggactgaactaccaggtaatggagaatgccagccatattgacatc
cccatcatgcggaccggggatatttcccaggaactcactgtcatatgcctcaccagggat
ggaacagccagaggctcacctaccagcaagattgaacccttttctgacttcatcactcgc
cctgcagaccacagcagtattgtcaggtttgccaggggagatagccagaatgtgtgcaga
gttatgcttcttaacgactctctatatgaatctcaaaaaaggttctatatggtgctgaag
gaaccagtgggaggcaagctgggatcaagggcagagacagagatcacaatcctccctgat
cccgcagacgagcccgtgttttacttcgaccaagctcactacactgtggatgagagtgct
ggcaccctggaggttaaggtgtggaaaactggcacggatctgtccaaaccctccagtata
actgtgcattcccggagcatggggaataaccctgctgaagtcggattggactacctacca
gtgacccgaatccttgacttctctccgggtgagatgactaagactctgagggttgccatc
ttggatgactcagcaagtccccagctggaaggacagaagacgttagagctctatttccgt
atccctgtagggggccgtgttgggcagcctagcactgctgtagtcactatagatgactca
gtctctgatttgcctaagatgcagtttaaggcagccgagtacagagtccttgaaagtgac
cttcaagttgttgctaaggtgacaaggtcaggtgacatcagcagccaatcagaagtgagg
tgctacactcgaccaatcacagcgaagggcgatatggactttgtggagagacctgactca
gaggattcccttgtggtctttcttccaggacagatcgaggcagactgtcacatacagctg
gtggatgacacagtccaggaacatgaggagagttttagactggttctcggcacaccagac
agtctgttgccagggggtgctaccctgggaggacaggtcaccactcacattgtggttgat
gacccagaggataatccaattatcatgtttgaactcaatgagtacacagtgaatgagccg
atcatcaaaggtgatgtgacgattgcccatatctctgtggtcagactcggggatacagaa
ggaacatcagtggtccaagtaacaacgcgcagtggaagtgcactagctggcaaagacttt
agaaactatgatagggtgattaattttggccctggggtaagccaccaggcagtagaattg
gagattctctatgacatgagtggggaggacagggaaatgttcaccgtacacatgtccgag
gacacacacaggatcgcacaagtcaggcacgatgaggctgtggtgtatatagaggagaac
agcaagctcgctgatataaaacttcccctggcgcctctgattgtctctctacgtgacctt
gaccttgttgccagtgattttaaaaggaggcccatacagggatacccacttgtgtgtgta
tcttcctgcagcccctaccatccccagttcctgtcagtccaagatgtatgtagggaggcc
ggtattgatgacgtccagaccaagttccgttggagggttggacaggcaggaggggtactg
tttgaccttgactctgacaccatcttcactactaccaggggggtcactctggatagcatc
tactttactgcaggtagccaggttgaatgttacgctagagcagttaattttgaaggagag
ccaggcatcgaggtagctagccctgtgatgacagttgaccaaagtcagggtgcatgtcca
tctaggagtgacagcgtcacattggctgaaccattcggtgcaaggatggggtatacaggt
ccagatgatgagtggcaccctaacaaggttcatgtgagagtacagattccccatactgat
ggaatgttacccgtcatctctacccgcaagatggccaactacgagctgaccctgaatgat
gatggctcacacaggaacaagcaccaatgtacaaacctgctgaaaagtggagggataggg
gcaggttttggggtcaatcaccatgatctgatggggttctatgggtcttcactcccgtac
cagtatagcgagatgctcaggagtaataagacactggcactttatagaaacctggacatg
tcctcgtgtttgtggacgtttgatgcctactacaacatgtcagagctggtcagcatgtgt
ggggctctgatggagactgattcacagatgcccggcagtcctctgtccttggttgtagtt
aaacttcccttgtttgtatcatacttgtacttcaatcctggcacgagagacacatggcga
gcccatgaggtgagcagatacctcacactgaagtttgtgtatggtacagggacaatgtgg
gaccaagccatactatcgcataggcacccagctgggctcaaagccgagatgttcccttct
ggtgtccagatacttgaggatggtcgactagttgtcagattccagactgtgcccaaattc
aggggacaattcttggcttcacatcctggaaaccagttcaactctaatgtgcagtctctg
agtcatggtggtgtgacctttgaccttcagctacttcctggccccaacacatctgtcaga
cctcaccagaactggcgtgtcacttctgccactgcactgagggactattctggagacttt
gttgtgaccctgctgccatgcctactgacctttacccagacttccactcaaccaatcagc
tgctctccctctgacaatgtgaccttcagtctaccaatcagattgcagcaagtcagtgac
cccgtgccatcaaagttcagcctgaatacagaattcagggtgactagaaagagtgatgtt
tggctctcggagaaactgtcatacatttctgaggacgacatgaccattactccaggtgat
acagtgtatggtagactagatgtgagccccatacagtcgttggatcggagtgtccatctt
tacattgagaaggtgttcatgtgtgcagggcagaggggttacattccactatacaatccg
gatataggccactatggatgtgtaggaaactcagaacaactggacactgtcatcagaatt
ctggacatagaggacccttcctccgttaacgcaacattccaaggggttcctttatcggct
aagatggcccatgatgacacacaatcctctgatgtcttcaacattccaggggcagatggt
ttctcatttgaatcttcgccactttttcagactgaggatgaaaaactatggtttctgcac
atagtgttttcacagaccgccacaaatggagatgtaatttcaagaacatcaatgtttgac
agtcataatgtgaggagatccctcgatgacattgcaggggttgggaatggtgaaaagggc
acaaatatggcccctttaatactcaacttcaatgggaagtctttgaaagaagaccaatac
cagcctggcaaaaaaactgaaaacagtgaaagccagatgccacttattgctgccctgatt
ggggcaagtgtcctactgctgataggtattattgtacttgtgatatatatacgacaccgg
cggaagcagacgtctccaccgccaaccccatcaggaaccataactgtgttatctacttct
cctggacttacaaaagtcatatcaaatgcttatgttttcaaaccacacccattataccat
tctgaagtctga
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integrated database retrieval system
