Mya arenaria (softshell): 128227882
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Entry
128227882 CDS
T09995
Name
(RefSeq) sterol regulatory element-binding protein 1-like
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
maea03000
]
128227882
04131 Membrane trafficking [BR:
maea04131
]
128227882
Transcription factors [BR:
maea03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
128227882
Membrane trafficking [BR:
maea04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
128227882
Autophagy
Mitophagy
Other mitophagy associated proteins
128227882
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_IRO3
Motif
Other DBs
NCBI-GeneID:
128227882
NCBI-ProteinID:
XP_052794754
LinkDB
All DBs
Position
3:40683146..40694601
Genome browser
AA seq
1158 aa
AA seq
DB search
MADQLGWSFGADGFPDLGTDFLGSNSFDNGSFDDIDDIVKYICPENVTDTFDTVPDPTPA
DILLQDAQLNTGVIDIKDEVSDFELGEQLLMSHVQQPFQQNTNQQTLFSFGAESLVDPVP
VNNTPPPALNIQLSSAQQLQQAVLKLQAAQRQSQASQQQQKQVQLLQLLQQHQQQKHQQK
QQQQQQQQQQQQKVTLTTDQLKLLLLEYQNRQNNRAPQTQTVQQKSSGITVQQLQQLSQL
QTLLKSVDTSNVSTHQLQLPGGQSPVQASSPISIQNYNSPSPIQLTSSPTYIQTPTPVQI
QSSPSPVATPISVLQQTATMTKPISTAVHSIQNVVNSGSTFVTTNIPIQVVENEKLPINR
LSRNEMGGRPVKGEKKTSHNAIEKRYRLSINDKITELKDLVAGTEAKLNKSAILRKAIDY
INFIKGQNERLKRENLQLKMAARKQNLQELLLLSKDTTEDLGYLTPPSSDINSDSEVSSP
GSPVFEEMDSSENSLSNGFTNNGMADKTRFTLCVFMLGVLAFNPFGAILGTAGIGGGESY
SGGFAGRQLQGVEELTAGTWSVWNSGLIPTMLLWLFNGLVVAFVLARLFIFGEPVTAKNS
DASTAYWRHRNQAEQDSARSDFSAAANQWGLALQALRRPLPTSKLDLAASLVWQTFRQVL
HKLYVGRWLFCRAGGIRRRTVDKSDVKNSARDAAVAYFRLHQLHLAGLIPGSEMWGLNLG
LCAVNMAEASGEVTSGSVKAEIYISTALRVTMGRMKLLARYFLSCARYTMSHCLDPIPAS
IHWLCHPEGHRFFVDQDWTLGCKDSIYTTCPSAADPLAQVTQQFREHLLERSLYSLITPS
NRSLEGGSQASEVLLYTQLLAEASNLDKKDGNRGVGLEIPELDEASAWWAGVVSIAIYWL
MGDDENAERSYPLVDSFPRKLQTSDDPLPKSVLVAFRARRNLLSSSQSSNHYTIIRQCDR
AGKLLRESLKLSYSRENTHITQVLQLLVCDWLLATRTEVWEREQNSGERENASQTELIAF
QQDLASLRKLAQDNKAALHRVFLHEATSRMMAGANPARTQQLLDRSIIRRRISQEEKEIS
EDSDNDTPDREQATALLMAGRHLPESLMAGPGDRATLISEASRLYEVLGDRKSVQSCRRS
LMLLEEHSHVQQQTTVQC
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccagttaggttggtcgtttggagccgatggatttcctgacttaggaacagat
tttctaggttcgaattcctttgacaatggcagtttcgatgacatagatgatattgtgaag
tacatttgtccagaaaatgtgactgatacatttgacacagtgcctgatcccaccccagca
gacatccttctgcaagatgcacagctgaacacaggagtgatagacatcaaagatgaagta
tcagactttgagttaggagagcaactgctgatgtctcatgtccagcagccatttcaacaa
aacacaaatcaacaaactctattttcatttggtgcagaatctcttgttgacccagttcca
gtgaataatactccgcctccggctttgaacatacagttgagtagtgctcagcagttgcag
caggctgtgttaaagcttcaggctgcacagagacaaagccaggcttcacagcaacaacag
aaacaagttcagttgttgcagttgctgcaacaacatcagcagcaaaagcatcaacaaaaa
caacagcagcaacaacaacaacagcagcaacaacagaaagtgactttaacaacagatcaa
ttaaaacttttgttgttggaatatcaaaatagacagaacaatcgtgcaccacagacccaa
acagtgcaacaaaaaagcagtggcataactgtgcagcagttacaacagctgtcccagcta
caaactctgctcaagagtgttgacaccagcaatgttagcacccatcagcttcagttgcct
ggtggccagtcaccggtacaagcctccagcccgatctccatccagaattacaactccccc
tcccccatacagcttacttcctcccccacttacatccagactcccacacccgtacagatc
cagtctagtcccagcccggtggccactcctatctctgttcttcagcagactgccaccatg
accaaacccatcagcactgcggttcattccatacagaatgtagtcaacagcggcagcacg
tttgtcaccacaaacatacccatacaggttgttgaaaatgagaaacttccaattaaccgt
ctgagtagaaatgagatgggaggcaggccggtgaaaggggaaaagaaaacttctcacaac
gcgattgagaagagatacagactcagtataaacgacaaaatcacagagctcaaggacctt
gtggctggcacagaagccaagttgaacaagtctgctatcctgcgcaaggcaattgactac
atcaacttcattaaaggccagaatgagcgactcaagagagagaacctgcaactgaagatg
gctgccagaaaacaaaaccttcaggagttgttgttactttccaaggacaccacagaggat
cttggatacctgactccaccctcatctgatatcaacagtgacagtgaggtgtcgtctcct
ggtagcccggtctttgaggaaatggactcatccgagaacagtttatccaacgggtttacc
aataatggtatggcagacaagaccaggtttaccctgtgtgtgtttatgctgggtgtactt
gccttcaacccgtttggagccatcctgggcacggctgggatagggggtggggagtcgtac
agtggcgggtttgctggaagacagctacagggtgtcgaggaactcactgctggcacgtgg
tcagtgtggaactctggcttaatcccaaccatgcttctctggctgtttaatggacttgtg
gtggcattcgtacttgcccgtctctttatatttggggagccagtgacagccaagaacagc
gatgcctcaactgcctactggcgacacaggaatcaggcggagcaggactcagctaggagt
gacttctcagctgcagcaaaccaatggggacttgccttgcaagccctcagacgccctttg
ccaacatcaaaactagaccttgcagcaagccttgtgtggcagaccttcagacaagtcctg
cataagctttatgtgggtcgctggctgttctgtcgggcggggggcatcaggagacgaact
gtggacaagtccgatgtgaagaactctgctagagacgctgctgtggcctacttcaggctt
catcagctgcacctggctggcttgatccctggcagcgagatgtgggggttgaacctaggc
ctttgtgctgtgaacatggctgaggcatccggcgaggtcacatcaggcagcgtgaaggct
gagatctatatctcaacagctctcagggtcacaatgggcagaatgaagttactcgcacgt
tacttcctgagctgtgcccggtacaccatgtcccactgccttgaccctatcccggcgagt
atccattggctttgtcacccggaaggtcacagattctttgtggaccaggactggactctg
ggctgcaaggacagcatctacaccacatgtccctctgctgccgacccactagctcaggtg
acccagcagttccgagaacacctgcttgagcggtctctatactccctgattacacccagc
aaccgtagtcttgagggtggctcacaggcctccgaggtcctactgtacacgcaactcctg
gctgaggcctccaacctggacaagaaggatgggaatcgtggtgttgggctggagatacca
gaactagacgaggcatctgcatggtgggccggtgttgtttccatagcgatctattggctg
atgggagatgatgaaaatgcagaaagaagctatccacttgttgactccttcccgaggaaa
ctacaaacttccgatgaccctctaccaaaatcagtgctcgtggccttcagagcaaggagg
aacctgctaagctccagccagagctccaaccattacacaatcatccgtcagtgtgaccgt
gccggcaagttactgagagagagccttaaactgtcatacagcagggaaaatacacacata
acacaggttttacagctgttggtgtgtgactggctactggctactcgtacagaggtctgg
gagcgggaacagaacagcggggagcgagagaatgcctcccagacagagctgattgccttc
caacaggacctagccagtctccgcaagctggcacaggataacaaggctgcactgcacagg
gtatttttacatgaagccacaagtcgtatgatggctggcgccaacccagcccgtacacaa
cagttgctggacagaagtattattcgcaggcgtatatcacaggaggaaaaagaaatatca
gaggattcagacaacgatacacccgatcgtgaacaagccacagccctactgatggcaggc
cgacacttaccggagtcactgatggcaggtcccggagatagggctacattgatctcggag
gctagcagactttatgaggttctgggagataggaagtcagtacagagctgtcgaagatct
cttatgttgcttgaagaacattcgcatgtgcagcaacagacaacagtgcagtgctag
DBGET
integrated database retrieval system
