Mya arenaria (softshell): 128227928
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Entry
128227928 CDS
T09995
Name
(RefSeq) protocadherin alpha-1-like
KO
K16498
protocadherin delta 1
Organism
maea
Mya arenaria (softshell)
Pathway
maea03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
128227928
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
maea01009
]
128227928
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
maea04515
]
128227928
Protein phosphatases and associated proteins [BR:
maea01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128227928
Cell adhesion molecules [BR:
maea04515
]
Cadherins
Protocadherins
128227928
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Cadherin_2
Ig_CLSTN
Cadherin_CELSR2_9th
Ig_Cad99C_N
BPD_transp_1
Motif
Other DBs
NCBI-GeneID:
128227928
NCBI-ProteinID:
XP_052794838
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All DBs
Position
3:complement(68458040..68477151)
Genome browser
AA seq
1138 aa
AA seq
DB search
MKRPAVSVVCCLAVVVFLLMTFAICADEVTYSIIENRTPGYYIGNIAQDSDVTQNVSESV
TYRFYEDNQFTKYFVIDNTNGNLNTSATVVDHEELCSFPNCQMTFEVSVIGKLFFDIVDV
TVNILDENDNAPIFTNAKDVINISEDAEVSLVYDIATASDADMLENNTIRGYTLVPSSDK
FSLVGVKNSNDFVLKLKLETYLDRETQDNYNLELLVFDSGKPSAMTSTHSFVVNVSDFND
NPPMFDSKEYKVTVNETIIPNTVILTVSATDKDSGDNGRVSYHIKRQSNVDTIERFFKVN
EDTGNISVISELRHESAEMYEFIVEAMDNGISPLTNETTVKVSVNDVENNAPAIVIKLFK
PGNIDYVDVEENQPTGFFIAHVDVTDNDKGDSGKYSCNITNSVFRLETFQNRGFKVIASG
QLDRETVAMHNVTVLCHDYGIPPKYSSKTFFVRVTDVNDNDPEFYKPVYLVSKNENMKGE
VVTRVSARDFDAGNNGTVEYLLENPNGDFSIDNSTGVVKMETDLDREEMDIRVFRVLAVD
KGQARRTGTATVSLTLIDVNDNAPVIVPTRPEFKIAENLVANTSVGLIHAEDRDIGDNAK
YDFSFAPLQTALPFDILPNGEIRTKQTLDREQHSRYDIPVKVTDHGNPALSSTQSVTIFV
TDENDNAPIVSFPNDSNNTVQFLYQMGGYNVVTTISAHDTDAGANGTLVFSIIGGNDENI
FEIDPDLGELSIINYIDIKEDQTVTLTIEVKDRGTSPKSIRVNLIVELIYTNGTGAKAIQ
GDSNNKYIIISVVVIITTIAVAVAIIVVILFLRNADRRKHHEDLGARYSDSGISSGSDSH
PPDAEVSGKEEGPGGRKKKEVSFSLQFSLDGIGGGKNEESNTEEYDKARYYDGPPSSVPP
HGPPMYSVQNQEKIDSHMKALKLQQYLWEAKTRVWENTQEVRQLPLGDSESETSRDTVTC
DSGRGGSEEDVSTASPVNEDKSVFGSLDSRSQRHVTFLPQPYYHSNLSTSSVRESTPIHQ
APGSHRPHQVQGSHRPQSYKYSKPEQQLHNKLAIKNFTNPTYSAQNSYPNQMPMPHLELW
RDGYYQGGMPARPRHDSGSSFRSNEDDGGSTTTSGSYTLEQNDIDVMDLYGHHGDLVV
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtcccgctgtttctgtcgtctgctgtttggcagttgtcgtcttcctgttgatg
acgtttgcaatatgtgctgatgaagtcacatacagcatcatagaaaacagaacacccgga
tattacattggaaacatagcccaggacagtgacgtcacccaaaatgtttcagaaagtgtt
acgtataggttttacgaggacaaccaattcacaaaatactttgtgattgataatacaaat
ggaaatttaaacacttcggcaacagtcgtcgaccatgaagaattgtgttcgtttccaaac
tgtcaaatgacgtttgaggtgtccgtcattggtaaactattctttgacattgtcgatgtt
acggttaatattcttgacgaaaatgacaacgctcctatctttaccaatgcgaaggatgtt
attaatatctcagaagatgctgaagtcagccttgtgtatgacattgccacggcatcagac
gctgacatgctagagaataatacgattcgaggatacacgctcgtgcctagctcggacaag
ttttcgctggttggcgtcaaaaactcgaatgatttcgttttaaaactaaagctggaaact
tatttggatagagagacgcaagacaattacaatctggagcttttggtgtttgacagcgga
aaaccaagtgcaatgacatctacacattcgtttgttgtcaatgtttccgactttaatgac
aaccctccgatgttcgactccaaggaatataaagtgactgtaaatgaaacaattattcca
aacactgtcatactgactgtttctgcgacggataaagatagcggtgataatggcagagtt
tcctaccacataaaacggcagtccaacgtggatacgatcgaacgctttttcaaagttaat
gaagatacaggaaatatttctgtgatttcggaattaagacacgaatctgctgaaatgtat
gaatttatcgttgaagcaatggacaacggcatctcacctctaactaatgaaacgacagta
aaggtcagtgtaaatgatgtagaaaacaacgctccagccattgttattaagttgttcaaa
cccggaaatatagactacgttgatgttgaagaaaaccagccgactgggttctttatcgct
cacgtggatgttacagacaatgacaagggagacagtggtaaatattcatgcaatataacc
aactctgtgtttcggttagaaaccttccagaaccgtggatttaaagtaatagcatctggg
cagctagacagggagactgtcgccatgcacaatgtgactgtgttgtgccacgactatggt
atacctccgaaatactcgtccaaaacattcttcgttcgtgtgactgatgtcaatgacaat
gatcctgagttttataaaccggtgtacctggtgtcaaagaatgagaacatgaaaggcgag
gttgtcactcgtgtcagtgcaagagactttgatgctggaaataatggaactgttgagtat
cttttagaaaatccaaatggtgacttttcaatcgataactcaacaggagtggtcaagatg
gaaactgatttggacagagaggagatggatatccgggtgttccgtgtgctggcagtggac
aaaggacaagcacggcggactggaaccgccaccgtgtccttgaccttgatagacgtgaat
gacaacgcgccggtaattgttcctacgagaccagagttcaagattgccgaaaaccttgtt
gccaacacaagtgtaggactaatacatgcggaggacagggacattggtgacaatgctaaa
tatgacttttcgtttgccccattacaaactgcgctgccttttgatatattgccaaatggt
gaaattagaactaaacagacgcttgaccgcgagcaacattctcggtacgatattcctgtc
aaggtgaccgatcatggtaacccggcactgagcagtacacagtctgttaccatttttgtc
acagatgaaaatgacaacgcaccaatagtctcatttcccaatgacagtaacaatacggtc
cagtttctgtaccagatgggcggctacaatgttgtcacgaccatctctgcccatgacaca
gatgctggtgctaatgggacgctagtgttctctattattggcggaaatgacgaaaacata
ttcgaaattgaccccgatctaggcgaactttctattatcaactacattgacattaaggaa
gaccaaaccgtcactcttacaattgaagtaaaagacagaggtacaagtccaaaatctatc
cgtgtaaatcttattgtggaactcatttacaccaacggtacaggcgctaaagcaatacaa
ggggactcaaacaataaatatattataatatctgttgtggtaataataacgactatcgcc
gttgccgtggcaatcattgtcgtgatacttttccttcgtaacgcggaccgccggaagcac
cacgaggatcttggcgcgaggtattccgattctggcatttcctctggctccgattctcat
cctccggacgcagaagtgtcggggaaggaggagggaccaggcggcaggaagaagaaggaa
gttagcttttctctgcagttctcgctggacgggattggcggcgggaaaaacgaggaatca
aacaccgaagaatatgataaagcgcgatactacgacgggcctccgtccagtgtccccccg
cacgggcctccgatgtacagcgtgcagaaccaggagaaaatcgactcccacatgaaggct
ctaaaactacagcagtacctctgggaggccaagacaagggtgtgggaaaatacgcaagag
gtgcgacagcttcctcttggtgacagcgagagcgagacgtcccgtgacacggtcacgtgc
gacagtgggcggggtggcagcgaggaggatgtctccaccgcctcaccggtcaatgaggac
aaaagtgtgttcggaagtctggattcgagaagtcagcgacacgtgacgtttctgcctcaa
ccctattaccatagtaacctgtcgacttcctcggtccgggagagcacgcccatccatcaa
gccccgggctctcacagacctcatcaagttcaggggtctcacagaccgcagtcttataaa
tactcaaagccagaacaacaactacacaataaacttgccataaagaacttcacaaatccg
acatatagtgctcaaaatagttaccctaatcaaatgcctatgccacatttggaactttgg
agagacgggtattaccagggtggcatgccagcgcgcccgcgtcatgacagtggtagttcc
ttccggtctaacgaagacgacggaggttcgaccacgacttccggtagctacacactcgaa
cagaacgatattgacgtcatggacttgtacggtcaccatggcgacctggtggtgtga
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