Mya arenaria (softshell): 128227989
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Entry
128227989 CDS
T09995
Name
(RefSeq) transient-receptor-potential-like protein
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
maea04040
]
128227989
Ion channels [BR:
maea04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128227989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank_3
Ank
Ank_4
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
128227989
NCBI-ProteinID:
XP_052794952
LinkDB
All DBs
Position
3:complement(1734619..1756135)
Genome browser
AA seq
1044 aa
AA seq
DB search
MKRNSSKYSDQRSSKRSAKIEPIIMPLQPIKCYHRIAPKERVFLDAAERGDKHTMYRCLQ
PPLPVNVNCTNMIGRSGIQIAVDNENIEIVELLLKQDGVKIGDALLYAIREGVFKIVEML
IDHPSITPEMLGNEWSRSKYVGEIGDPEESNDYSPDISPVILAAHCNQFEILQLLLMRGA
NIDRPHQLSCSCRRCQELVHEDGLRHSLRRINTYRALASPAWISLTSSDPILSAFRLSWE
LKNLALRENEFKDTYMELSGQCKKCACDLLDQCRSTEEVIAILNRPSDEDVEDTGRERGK
LTLARLKLAIKYEQKEFVAHPNCQQLLTSIWYEGLPGWRKRSALAKFFICLGLILSMPFM
AVYYWVFPMSRIGQILRSPFMKFLYHSASFGAFLILLICTSMQVSSIEGRERLRGPPPTE
FEWLIFIWITGFIWSECKQLWEEGLKAYIRQWWNWLDFIMLSLYLTAFTLRFLAYFQIES
GRYGPRELERVNWPLYDPTLVSEGLFAVANVFSFARIIFLCQADQYLGPLQISLGCMLVD
IAKFLLIFFLVITSFACGLNQLFWYYTPTADGYSLSFYSLENSYRTLYWSLFSMTQLKDI
KIPGSQAFTALIGEMLFMAYQTMAVIVLINMLIAMMSNSFQEIENHADMEWKFTRSKLWM
GYFDQGSTLPPPFNIVISPKSIFYCTRALRDLFGKCCHRRTSKSRRKFKTADKGYQTSAS
SSFNGYTGSAFHKPTCNGDAIGQQGEQTTYEDIMRRLVTRYIHQTKKQRRQNGVNEDDLL
EIKQDISSLRYEIREDRKRETARSESYFESLRSNILASLKETRPIHTGNKSRYFHAGMVA
PKSHLGSREGDNRSTRTFQPSDCFVEAQTDTFNRETYHIPRTNDNDEVKNISTESRFSDK
PANYTAAKIESYLQHLGENGSIQTSDSTHLPNLTNDPYKSHVGQVFVPRPTSFLCPLHNP
EDTTDTQIHAATQSQTNTTGSRILSDANIDAIKLEIIESLRSELRQTVNDATFELLHPNH
PIHSVNNVPELASDLYQTHLYTQL
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcaactcttcaaagtatagtgaccagagaagctcaaaaagatcagccaaaatc
gaaccgatcataatgccgctgcagccaatcaagtgttaccaccggatagccccaaaagag
cgcgtatttctggacgcggctgaacgaggagacaagcacacgatgtaccgctgtctccag
ccaccgttacccgttaacgtcaactgcacaaacatgatcggcagatctggcattcagatt
gctgtggataatgaaaacatcgaaattgtcgagctgcttttgaagcaagatggtgtgaag
attggcgacgccttgttgtatgccatacgggaaggtgtgtttaagattgtggaaatgtta
atagaccatccatctataactccagaaatgcttggaaacgaatggtcaaggtcaaaatat
gtcggtgaaataggcgaccccgaagaaagcaatgactactccccagacatatcacccgtt
atactagccgcccattgcaaccagtttgaaattctccaactgctcctgatgagaggagcc
aacatcgaccgtccacaccagctgtcttgttcatgtcgccgttgtcaagaattagtccac
gaggacggtttacggcattcgttacgccgtataaacacatatcgagcccttgcaagcccg
gcttggatctcactcacaagctcagacccaatcttatcagcatttcggttgtcatgggaa
ctgaagaatcttgctttgcgtgaaaacgagttcaaagacacgtacatggagttgagtgga
caatgcaagaaatgtgcctgtgatttactggaccagtgcaggagtacggaagaagtcatt
gccattcttaatcggccttctgatgaggatgtggaggataccggacgggagagagggaaa
ctgaccctcgcacggctgaaacttgccatcaaatatgagcaaaaggagtttgttgcccat
ccgaactgccagcaactgctgacaagcatatggtacgaaggacttccgggttggcggaaa
aggagcgcattggcaaagttcttcatctgtctcggccttatcctgagtatgcccttcatg
gcagtgtattattgggtgttcccaatgagcaggattggtcagatcctcaggagccctttc
atgaagttcctgtaccacagcgcatcttttggggcctttctgattctcctcatttgtaca
tctatgcaagtttccagtatcgaaggaagagagcgtctgcgaggtccaccaccaaccgaa
ttcgagtggcttatttttatatggatcacagggtttatttggtcggagtgcaaacagttg
tgggaggaggggttgaaagcgtacattcgtcagtggtggaactggctagacttcatcatg
ctctcgctctatctcaccgccttcaccctccgcttcctcgcctatttccaaattgaatct
ggccgctatggccccagagaactcgaacgagtaaactggcccctttatgatcctaccttg
gtatccgaaggactttttgcagttgccaatgtgtttagttttgcaaggataatttttcta
tgtcaagctgatcagtatttaggccctttacaaatatcgttgggctgtatgcttgttgat
attgcgaagttcttgctcatatttttccttgtgataacttcatttgcctgtggactgaac
caattgttctggtattatacaccgaccgcagatggatattcgctttcattttactcgttg
gagaacagctaccgaaccctttactggtccctatttagcatgactcagttgaaggatatc
aagattcccggcagccaggcgttcacagctctgattggggagatgttgtttatggcctac
cagactatggccgtcatcgtgcttatcaatatgctcattgccatgatgtcaaattcattt
caagaaattgagaaccacgcagacatggagtggaagttcactcgctcgaagctctggatg
ggctactttgaccagggctccaccctaccccctcccttcaacatcgttatcagtccaaaa
tctatcttttactgcaccagagcattaagagacctgtttgggaaatgctgtcatagacga
acgtcaaaatcccgtcggaaatttaaaacagctgacaagggttatcaaacttccgctagt
tccagttttaatggatacactggatcggcatttcataagcccacctgcaacggtgatgcg
attggtcagcaaggcgaacaaacaacctatgaagacataatgcgacggctcgtaacaaga
tacatccatcagacaaagaaacaaagacgtcagaatggcgtcaacgaggacgacctgctc
gaaataaaacaggatatatcaagcttacggtacgaaatacgagaagatcggaaaagggag
acagctagatctgaatcatacttcgaaagcttgaggagcaatattctcgcttccttgaaa
gaaactagaccaattcacacaggcaacaaaagtagatattttcatgcgggcatggttgca
ccaaaaagtcatcttggaagtagagagggtgacaatcgctcaacgcgtacttttcaacct
agcgattgctttgttgaagcgcaaacggacacattcaacagggaaacataccatattcca
cgaacgaatgacaatgacgaagtaaagaatatttccacggaatctcgattcagtgataaa
ccagctaactacacagcagcaaagatagaaagctaccttcaacatcttggagagaacggt
tcaatccagacttcagacagtacacacttaccaaatctaacaaacgatccatataaatca
catgtcggacaggtgtttgttcctcgaccgacttcattcttgtgcccacttcataaccca
gaagacactacagacacgcagatacatgcagcaacccaaagccaaacaaatactaccggt
agtagaatattatcagatgctaacatagatgcaatcaaacttgaaatcatcgaatcttta
cgctcagaactgagacagactgtaaatgatgctacattcgaattattacatccgaaccat
cccatacattccgtaaacaacgttcctgaacttgcatccgatctctatcagacacatttg
tacacacagctgtag
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