Mya arenaria (softshell): 128228086
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Entry
128228086 CDS
T09995
Name
(RefSeq) glycine receptor subunit alpha-4-like isoform X1
KO
K05195
glycine receptor alpha-3
Organism
maea
Mya arenaria (softshell)
Pathway
maea04080
Neuroactive ligand-receptor interaction
maea04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128228086
04082 Neuroactive ligand signaling
128228086
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
maea04040
]
128228086
Ion channels [BR:
maea04040
]
Ligand-gated channels
Glycine
128228086
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Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Phage_phiTE_241_N
Motif
Other DBs
NCBI-GeneID:
128228086
NCBI-ProteinID:
XP_052795135
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Position
3:complement(56564512..56586752)
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AA seq
484 aa
AA seq
DB search
MCSLRWCGVAFVLVGIVVQGSEGQNSTLNDTDIPSTRKLLIENLFLRYDARIPPTTSKEG
STNVTVQLFILSIDSISETNMDFSISMFLRQRWFDKRLMYTPRADMVRLEMDSASIARVW
VPDLFMPAEKSAHVHHVTVPNKLMHIYPDGTIQYSLRMSATIKCNFDLRKFPLDSQHCMV
EMESYGYTTDTMRFEWAGLDPISHSPGLAISQFTLNEISTSQCDKLYYGVGYSCVRFDIS
MVRSKGYYITQVIIPSYLIVFLSWVSFWLDIDAVPARISLGLLTVLTMTTQSAGARNNLP
KVSYLKAIDVWMAACLLFVFLALVQFAYVNVLSRVQKRRQLKPVAGKIALGTPMSADDSI
PPNEDIEANNTTEDKGARLFGVVRRAQLQPVVSKIAIGTPLPVDNSLPHNGDVEANGKMD
DKGARIYGMVRRAQMRFGRLVSADREKARNIDRISRTLFPVAFFLFNLVYWCVYIFWEPV
TPAE
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcactgcggtggtgtggtgttgcctttgtgcttgttgggattgttgtccagggc
tcggaaggacagaactccaccttgaatgacacggatattccaagcaccagaaaattgctg
atagaaaacctgtttctccgctacgatgcccggattccaccaacaactagtaaagaaggt
tcaacaaatgttacggtccagctgttcatcctgagcattgactccataagtgaaaccaac
atggacttttcaatcagtatgtttttacgccaacgctggttcgacaagcgtttgatgtac
acaccgagggcagatatggttcgactggagatggactcggcgtcaatagcacgtgtctgg
gtgccggatttgttcatgcctgccgagaaaagtgcgcacgtgcatcacgtgaccgttcca
aacaagcttatgcacatttacccggacggcactatacaatatagtctcaggatgtcagca
acaatcaaatgtaactttgacctccgcaagttcccattggatagtcagcactgcatggtg
gaaatggagagctacggatacacaacggacacgatgaggtttgagtgggcgggactggat
cccatcagtcacagtccgggccttgccatctctcagttcaccctcaacgagatatcgact
agccaatgcgacaagctatactacggtgtcgggtactcctgtgtgcggtttgacatttca
atggtgcgcagcaagggttactacatcacccaggttatcatccccagctacttgatcgtg
ttcctttcatgggtctcattttggctcgacattgacgcagttcctgcaagaatatctctt
ggtcttctcacagtcctcaccatgacaacacagagtgcaggagcacgcaacaacctaccc
aaagtatcctacttgaaagcgatcgacgtatggatggcggcctgtttactgttcgtattt
ttggccctggtacaatttgcgtacgtcaatgttctgtcgcgtgttcaaaagcggcgtcaa
cttaaacccgtggccggtaaaatagcccttggtacgccaatgtctgccgacgactctata
cctcccaatgaggacatcgaggcaaacaacacaactgaagacaagggtgcccgattgttc
ggcgtggtacgtcgagctcaactccagcctgtggtcagtaaaatagccatcggtacacca
ctgcctgtcgacaactctttacctcacaatggggacgttgaggccaacggcaagatggat
gacaagggtgcccgaatatacggcatggttcgtcgagctcagatgaggtttgggcgcctg
gtatccgcggaccgcgagaaagcgcgcaacattgaccgcatctccaggaccctgtttccg
gtcgccttctttctattcaaccttgtatactggtgcgtctatattttctgggagcctgtc
actccggcagagtga
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