Mya arenaria (softshell): 128228135
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Entry
128228135 CDS
T09995
Name
(RefSeq) protocadherin-9-like
KO
K16498
protocadherin delta 1
Organism
maea
Mya arenaria (softshell)
Pathway
maea03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
128228135
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
maea01009
]
128228135
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
maea04515
]
128228135
Protein phosphatases and associated proteins [BR:
maea01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128228135
Cell adhesion molecules [BR:
maea04515
]
Cadherins
Protocadherins
128228135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_pro
Myco_19_kDa
Motif
Other DBs
NCBI-GeneID:
128228135
NCBI-ProteinID:
XP_052795218
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All DBs
Position
3:complement(47318828..47338400)
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AA seq
1112 aa
AA seq
DB search
MATIVAVTILLASTLVAMTRGQGTMLTFRINEEEPAGTFVGSVADANLEGTSFRYTIIGT
QTDFSLQDQTGNLYTMTKIDRDSKCKDAQSSTNGECVIELLVGAESGTFYATVTVKVVIN
DVNDNAPLFPSYTHELRIVEGTPRLTEFSIPRAVDTDYGSNGITKYEISPSHPSFGIRAT
KNLAGKFDVFIVVLDTIDRETEDTYQLEVFAIDGGGRRGGMTVNVIVTDINDNEPVFDRS
NYTTTVEEGTARGTVILTIQATDKDIGDNGKVSYKIADGFTLTDFVLNSTSGEIYVDTDD
LVYYPGVSYEFVVDAYDHGENFKQKQVYVYINILDTGNNHPQITLNVGNSGFVNISENKG
LKQMVAAVTVEDPDTGLNGEVTCSTQESYFSVQKVDNSQFIVVVNSQLNREIIDMHTVNV
TCTDNGDPPLSSSKTFLVRVTDENDNMPIFESKSYSAKIDENRQEEQMILKVSATDNDIG
DNSKIHYKIVDNDKITVHSVTGVISAKPFFDRESTPVIVFEVLAIDSGAKPLTGTATVTL
TIEDVNDNAPKFRQPSYSLEVLENLPSGTYVDQISATDLDIGVNGMFTFSLSSEYLESRL
PFIVFENGEIQTNKALDRETRSSYMFDVVVQDQGSPPLDNSVKVTVIVKDVNDNKPNITF
PIENNKTVSIYYPNNDLDVVAQVEAYDIDDGENKLLNYNILKGNDLGMFKIDQNTGTISI
AKHDIKIDSDMDVTLQVEVNDKGDPVLKSHADLVVSVIYSNATYQDLSGEKDQLVVIVVV
VVVVTAVFSAIIIGVIVLLRNWDRKKSLPDSTDKPETTEQGYSSVDKPSLFILNNAGESS
TDYPSPYAEVTRKKKEVSFSLDEMDSGFQNMQLHVNLSPEPSKYAPEKPPRQESPDSTKD
LYDKVTTRLETLRLQQMLMGTRARQHHPAPHPDDSRSESSGETSSGDSGRGASEEEVTSA
SPSTDDQKVFDYIVPSSSFSTSSQSHRPSPSKADSRSVAPPPIPHRTYRPYSSFNRNQTY
TGNQDYSSDYGSNYQYLNDSNKPYRHSDIIDPSALSWQHAQPRSYSTKLNSVNIQSDFSF
SPSQYRLHPRDDDDCSTTTSGSYTLHSIEDLL
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggcaactattgttgctgtaaccatcctactggcctcaactctcgttgccatgacgagg
ggacaggggaccatgctgaccttcagaatcaatgaggaagaaccagcgggaactttcgtg
ggtagcgtagcagatgccaatcttgaagggacgtcatttcggtacacaattatcggcact
caaactgactttagtctacaggatcagactggcaacttgtatacaatgactaaaatcgac
cgtgattccaaatgtaaagatgctcagtccagcactaatggtgaatgtgtcattgaattg
ttagtaggtgcagagtcagggactttttacgcaacagtaactgtgaaagtggttatcaat
gatgttaacgacaatgcgcctctatttcctagttacacacatgagttaagaattgtagaa
ggaactccaagattgacagaatttagtataccccgagctgtggatactgactacggaagt
aatggaataaccaagtatgaaatcagtccctctcatccaagtttcggaattcgtgctacc
aaaaatcttgctggaaagtttgatgtgttcattgtagtattagataccattgacagggaa
acagaagacacttaccagttggaagtgtttgctatagatggtgggggtaggcgtggaggg
atgactgtaaatgttatagttactgacatcaacgacaacgaacctgtctttgataggtca
aactacaccacaactgtggaggaaggcactgcacgaggaactgtcatcttaaccatacaa
gccactgacaaggacattggcgacaatggtaaagtgtcgtacaaaattgctgatggattt
acactaacagattttgtcttgaattctacaagtggagaaatctatgtggacactgatgac
ttggtttattatcctggtgtgagctatgaatttgttgttgatgcttatgaccatggagaa
aattttaagcaaaaacaagtgtatgtgtacattaacatcttggacactgggaataatcat
ccacagatcactctgaatgtcggtaacagtggtttcgtaaatatttctgagaataagggc
ctgaagcaaatggttgccgcggtaacagtggaagaccctgacactggtctcaatggcgag
gttacatgctccacacaggaaagctacttctctgtgcagaaagtcgacaatagccagttt
atagtggtagtgaacagccaactgaaccgagaaatcattgatatgcatacagtgaatgtc
acatgtacagataacggtgatcctcctctgagttcctccaaaacgtttctggtccgagtc
actgatgaaaatgacaacatgcctatatttgaaagtaaaagttactctgccaaaattgat
gaaaatagacaggaggaacaaatgattttgaaagtttcggctacagataatgatattggg
gacaacagtaaaattcactataaaattgttgacaatgataaaattactgtgcattcagtg
actggcgtcatatctgccaaacctttctttgatcgtgaaagtacgccagtgatagtgttt
gaagttcttgctatagactcgggcgccaaacctctgactgggacagccaccgttaccctc
acaattgaagatgtaaatgacaatgcccccaagttccgacaaccatcttactctctagaa
gttctagaaaatctgccctcgggaacgtacgtagatcaaatttcggcgacagaccttgac
attggtgtgaatgggatgtttactttttcgctttcttcagaatatctggaaagtaggctt
ccattcatagtgtttgaaaatggtgagattcagaccaacaaggcattggatcgtgagacc
aggagtagctacatgtttgacgtagtagttcaagaccagggatcccctccactggacaac
tcagtgaaagttactgtcattgtgaaagatgttaatgataataagcctaatattactttc
ccaattgaaaataataagactgtgtcaatttattatccaaacaatgaccttgatgttgtc
gcacaagttgaggcctatgatattgatgatggtgaaaataagttgttgaactacaacata
ttgaagggcaatgatttaggaatgttcaagattgatcagaatactggaacaatatccata
gcaaagcatgacattaaaatagattctgatatggatgtgacattacaggttgaagtgaat
gacaaaggagatccagttctaaaatcacatgcagacttggtagtgagtgttatctactcc
aatgccacataccaggacttgagtggtgaaaaagaccaactggttgtaattgttgttgta
gtggtggttgtcacggcagtgttctctgctattatcatcggtgtcatagtccttctacgg
aactgggacaggaagaagtcacttccagactcaactgataagccagagacaactgaacag
ggttactcgagcgtggacaagccctccctgtttatcctgaacaacgcgggtgaatcctcc
actgactacccgagcccgtacgctgaggtgaccaggaaaaagaaggaagtcagcttctcc
ctagatgagatggactctggcttccagaacatgcagctacatgtaaatttgagccccgag
cccagcaaatatgctccagaaaagcctccccgccaagagagtcctgacagcacaaaggac
ctatacgacaaggtgaccacacgtcttgagaccctccgtttgcagcagatgttgatgggg
actcgtgcccgtcaacaccatcctgcccctcaccctgacgacagtcgctcggagtcatct
ggggagacaagtagcggggacagtggacgtggtgccagtgaggaggaggtgacaagtgcc
tcaccttccacagatgatcagaaggtatttgactacattgtgccatcctccagtttttca
acgtcatcccagtctcaccgcccctccccgtcaaaggccgacagtcgtagcgtggcaccc
ccacccattccacaccgcacatatagaccttattcatcatttaacagaaaccagacttac
acagggaaccaggattacagttcagactatggttccaactatcagtatttaaatgactca
aataaaccatatcgccatagtgacataattgaccccagtgcattgtcatggcaacatgca
cagcctcgttcatattctacaaaattgaacagtgttaatattcaaagtgacttctccttc
tcgccatctcagtatcgcttacatccacgagacgatgacgactgctcaacgacaacgtcg
ggtagctacactttacattcaatcgaggacttactgtga
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