Mya arenaria (softshell): 128228184
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Entry
128228184 CDS
T09995
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
maea
Mya arenaria (softshell)
Pathway
maea03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128228184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maea03021
]
128228184
03036 Chromosome and associated proteins [BR:
maea03036
]
128228184
Transcription machinery [BR:
maea03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
128228184
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
128228184
RSF complex
128228184
WICH complex
128228184
B-WICH complex
128228184
NORC complex
128228184
BRF complex
128228184
NuRF complex (fruit fly)
128228184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
Motif
Other DBs
NCBI-GeneID:
128228184
NCBI-ProteinID:
XP_052795307
LinkDB
All DBs
Position
3:29747483..29775190
Genome browser
AA seq
1033 aa
AA seq
DB search
MSNSEAESSGDEQMDEQVPGPSVLLKAPPKGKNAEDGEEEEEDYDAKIESDRGNRFEYLL
KQTEIFSHFMLTGMTGNQKTPTSPLKMKGRPSKGKLAEKAKLVEAGEKTKPKPDTTEGVD
HRHRRTETEEDEELITQAKKSQAMVTRFEESPSYIKNGEMRDYQVRGLNWMINLYEHGIN
GILADEMGLGKTLQTISLLGYMKHYRHIPSPHLVICPKSTLHNWCNEFARWCPSLRTVKL
IGLAEERAAIIRDVMMPGEWDVCITSYEMVIREKSVFKKFNWRYMVIDEAHRIKNEKSKL
SEIVREFKTANRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFNTSSMDLELVE
RLHGVLRPFLLRRLKSEVEKKLLPKKETKIFIGLSKMQREWYTKILMKDIDIVNGAGKTD
KMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDKHLVDNCGKLCVLDKLLPRLQEQGSRV
LIFSQMTRMLDILEDYCYWRAYNYCRLDGQTAHEDRQNSIDEFNFPGSKKFIFMLSTRAG
GLGINLATADIVIIFDSDWNPQADLQAMDRAHRIGQKKQVRVFRFITENTIEERIVEKAE
MKLRLDNIVIQQGRLMDSAANKLGKDEVLNMIRHGASHVFASKDSEITEDDIDAIMAKGE
KKTEEIKERLDKLGEGHLQKLSFDTEQGSIYQFEGADFREKQKIGMNWIEPPKRERKANY
AVDQYFREALRVNEPKAPRAPRPPKQPNVQDFQFFPPRLFEILDKEIYFYRKSIGYRVPR
NPELGNDAERIRKEEQAKIDEAELLNDEENAEKDDLLNQGFTEWNKRDFNQFIKANEKYG
RDDIDKISREVEGKTPEEVIEYSRVFWERCNELQDIEKIMAQIERGEAKIQRRISIKRAL
DAKMMRYKAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDELRTAIRQAP
QFRFDWFIKSRTAMELQRRCNTLITLIERENMELEEREKAEKRRRSKNSGGQKTGKRKAE
TPTGSASKSKKKK
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaattccgaagctgagagttcgggcgatgaacaaatggacgaacaggttccagga
ccatccgtgttgttgaaagctccaccaaaaggcaaaaatgctgaagatggtgaagaggag
gaggaagactatgatgctaaaattgaatccgatcgtggtaacagatttgaatacctccta
aagcagacggagattttttcccacttcatgttgacaggaatgaccgggaatcagaagact
cctaccagtcctctaaaaatgaagggcaggcccagtaaaggaaagcttgcagagaaagct
aaacttgttgaggctggcgagaaaacaaaacctaaaccagacacgactgaaggagttgac
catcgtcacagacgtactgagacagaggaggatgaagagctgattacacaggcaaagaag
tcccaggccatggttacacgctttgaagagagcccctcatacatcaagaatggtgagatg
cgtgattaccaggtgcgaggtctcaactggatgatcaacttgtatgagcatggtatcaac
ggcatcttggcagatgaaatgggccttggtaagacattacagacaatctccttgctgggt
tacatgaagcattaccgacacatcccgagcccgcacttggtcatctgcccgaagtctacc
ctccataactggtgtaacgagttcgctcgttggtgccccagtctgcgcactgtcaaactc
attggtctagcagaagaaagggctgcaatcatacgtgacgtgatgatgccgggtgagtgg
gacgtctgtatcacttcatacgagatggtgattcgagagaagtctgtattcaagaagttc
aattggcggtatatggttattgatgaggcacacagaattaaaaatgaaaaatcaaagctg
tcggagatagttcgagagttcaagacagcgaacagactgctactcacaggaacaccacta
cagaacaacctgcatgaactctgggccctcctcaacttcctgctgcctgatgtcttcaac
tctgcagatgactttgattcctggttcaacacatcgtctatggatctggagctggttgag
cgacttcacggggtgttgcggccgttccttttgagacgtctcaagtctgaggtggagaag
aaactgctaccaaagaaagaaacaaagatcttcatagggctcagcaagatgcagagagaa
tggtacacgaagatcctgatgaaggacattgacattgtgaacggggctggcaagacggac
aagatgagactcctgaacattctcatgcagctgaggaagtgttgtaaccacccttacctg
tttgatggagctgaaccaggccccccatacacaacggacaagcatctggtggacaattgt
gggaagctgtgtgttctggacaaactgctgcccaggcttcaggaacaaggttcacgagtg
ttgatattcagtcagatgacccgtatgttggacatcttggaggactactgttactggcgt
gcctacaactactgtcgccttgatggacagacagcacacgaggacagacagaattccata
gatgagttcaacttccctggcagtaagaagttcatcttcatgttgtccactcgtgctgga
ggtcttggaatcaacctggccacagcggacatcgtcataatctttgactcagactggaac
ccgcaggctgatcttcaagctatggaccgagcccatcgtattggtcagaagaagcaggtg
cgtgtcttcagattcatcactgagaacacgattgaggagaggattgtggaaaaggcagaa
atgaagcttcgacttgataacattgttatacagcaaggtcggctgatggacagtgccgcc
aacaagctggggaaggatgaggtgttaaacatgatccgacatggagccagtcatgtgttt
gcctccaaggacagtgagatcacagaggacgacatcgatgctatcatggcaaagggagag
aaaaagactgaagagattaaggaacgcctggacaagttgggagagggccatctacagaag
ctttccttcgacacagaacagggatccatataccagtttgagggtgccgacttccgtgag
aaacagaagattggcatgaactggattgagcccccaaaacgagagaggaaggccaactac
gctgtggaccagtacttcagagaggcactgcgagtgaatgaaccaaaagcaccaagggct
ccaaggccccctaagcagcccaatgttcaagacttccaattcttcccaccacgactgttc
gaaattctggacaaagaaatctacttttaccggaagagtattggctaccgtgttccccga
aacccggagctggggaacgatgcagagagaatacgcaaggaggagcaggcaaagatagat
gaggctgagctactcaatgatgaggaaaatgctgagaaagacgatttactcaatcaggga
tttacagagtggaacaagcgtgacttcaaccagtttattaaggcaaatgaaaagtatgga
cgcgacgatattgataagatctcgagagaagtggaggggaaaacaccggaagaggttata
gaatactcccgagtgttctgggagaggtgtaatgagttacaagacattgagaagatcatg
gctcagattgagcgaggggaggccaagatccagagacgaatcagcatcaagcgggccctc
gacgccaagatgatgcgctacaaggcaccattccaccagctacggatccagtatggtaca
aacaaggggaagaactataccgaggaagaggatcgctttcttatatgtatgctgcacaag
ctgggctttgacaaggagaatgtgtatgatgagctgagaacggccatcagacaggcgcca
cagttcagatttgactggttcatcaagtcaagaactgctatggagcttcagcgacgttgt
aacacgctgatcacgttgattgagagggagaatatggaactggaggagagagaaaaggct
gagaaaagacgacgtagcaagaactccggcggacagaagactggcaagaggaaggcggaa
actccaacgggcagtgccagtaaatcaaagaagaagaaatga
DBGET
integrated database retrieval system
