Mya arenaria (softshell): 128228373
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Entry
128228373 CDS
T09995
Name
(RefSeq) TBC1 domain family member 1-like isoform X1
KO
K18341
TBC1 domain family member 1
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
maea04131
]
128228373
Membrane trafficking [BR:
maea04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
128228373
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
128228373
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
128228373
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
Motif
Other DBs
NCBI-GeneID:
128228373
NCBI-ProteinID:
XP_052795622
LinkDB
All DBs
Position
3:49892386..49944962
Genome browser
AA seq
1408 aa
AA seq
DB search
MELETNVTVRAHRKAVCERPVSFYFGERKKSKEPIQEPSQFRRSSSMVNLPEAERAAMFS
CWKNVHGEKHELESSTDSIPQLYSRENSMSDFSEMLIKSGKNISSSRASLLLPLSEEGIS
EWQQSTAEDFNGNEIVGNQELTAGRPDQIDTDLVTRNMKYDNLMRQNSFIATKVQLRNHD
SLTVNRGRAMQRSSLGVLLGSQMQEKPDFDGTCQSDDSPYDNTDTRHGGIPAFGCRSAAC
RQTSYPGLREQTLIKNEAKRMSMPLPMMSRQEILNHQQHIIDSDAEVSDVVPELFKSIRG
ATQRDIFAEMEHKEPEPAKACFEVMYVGRAKVRGKKIFSSHIDDLVKRLEAKEFGIKPNG
KDSSDRRRHKSDSSVKNLPTFFEENFVQENELQKLSHATIHQGVEFNSQSPTGSNEDVNK
QTGSVIHNRNSDSTDHLSDGIHSSTENLHEGLHLSHSGDQLKEMFHSLHPHPEGHSMDGT
GQGQECPGGQGRTVNRTMVFRVGQSEIALISLDKKQTIIDRKFKNISSVSQGHVKPEVFG
FISREPGNILICHLLRCCSRALVDEIMTALRTSFQSAFQQSKLQTQQICINCPLHQYHNL
CKDINGQSAEAAYSLLCKRIQQLPEKDATDLYHSLKNENPQSHEESVEALMIHLRKLCET
KQREHSHISDTHKGAQRTDFYLVDMKGKTSNKSAFDLIRNRARKTLADSFESLLTNVHHK
KEEVKEAFRHRSGTNESDTSNFNRSLDLTDTDFSPAPSPGHMSKDMVANFEFSSPPPSPT
PGRPRSSTVGALPDTQAMEMMLERHKKNKQAEKKELEKRRLSESPMKHMFILANCSSPSK
KSSTHMTPGEDDPPATSSDPSPQGSWRQAIFNRVVTPVKHLSNPTLEESLNEDEEGPHKK
TSEELRALWRKAILETLLLIRMEKENIDLQARQDEADLKRRKLDYAEITPCLKDVTRSWE
ELLSMPGRPHTLVDQDKLIGYVKQGVPQSKRGEVWWFLVEQHRLRVPDLQENTPEVDYNE
LLKQLTNHQHAILIDLGRTFPGHPYFSLQLGSGQLALFNLLKAYSLMDHEVGYCQGLSFV
AGILLMHMEELQAFEAWKHVMYNLGLRKQYKTNMIALQIQLYQLTRLLHDNYHDLYEHFE
AHDIAPTLYAAPWFLTLFASQFPLGFVSRVFDLIFMQGSEVIFKVAMVLLGNHKELILHC
DTFETIVEFIKTTLPEMSMIQMERVINQVFDLDLSQQLHSYAVEYQVLKEEMMYSPAQGD
SDQLARLELANDALTKQNMELIDKLQHAHSHERSLEIMIHNFQTQEAKLKSHIRTLELER
SALLNAVQTLKQLIPEQDRNNFDINLPTLTPSMPVSPVHHGRIVGHDGIAITDTLPQGGS
MNSNEQTDSSSEKDNFSKSARFRPDRQS
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atggaattagagacgaatgttactgtgcgagctcacaggaaggctgtctgtgaaagacca
gtttccttttactttggtgagcgcaaaaaatctaaggaaccaatacaagaacctagccag
tttcgacgcagtagcagcatggtgaacttaccagaggctgaaagggcggcaatgttttca
tgctggaaaaatgttcatggcgagaaacacgagttggaatcatcgactgacagtattccg
cagttatacagtcgagaaaatagtatgtcagattttagtgaaatgctcatcaaatcaggt
aaaaatataagcagcagccgcgcaagtttgctcctcccattgtccgaggagggaataagc
gaatggcagcagagcactgcagaagactttaatggcaatgaaattgtgggcaatcaagag
cttactgctggaagacctgatcaaatagatacagatttagttaccagaaatatgaaatat
gataacttaatgaggcaaaatagctttatagctactaaagtacagcttagaaatcatgat
agtctgacagtgaaccgaggtcgtgccatgcaaaggagttcgctgggtgttttgttaggc
tcccaaatgcaggaaaagccagactttgatggcacatgtcagtctgacgatagcccatat
gacaatactgatacaagacatggcggaatacccgcatttgggtgtagatctgctgcatgt
cgacagacttcatatcctgggttaagagagcaaaccctgatcaagaatgaggctaagaga
atgtccatgcccctccccatgatgtctaggcaagagatcctcaaccaccaacaacatatt
atagatagtgatgctgaagtgtccgatgtggtgccagagctgtttaagagtatacgcggg
gcaacccagcgtgatatctttgccgagatggagcacaaggaacctgagcccgcaaaggca
tgttttgaggtgatgtatgtcgggcgtgccaaggtgcggggcaagaaaatcttctctagt
cacatcgatgatcttgttaaaagacttgaagccaaagaatttgggatcaaacccaatggg
aaagactcctccgatcgcagaagacacaagagtgattctagtgttaaaaacttgccaact
ttttttgaggagaactttgtgcaggaaaatgagctacagaagctttctcatgccacgata
caccagggagtcgaatttaatagccagtcccctactggaagtaacgaagacgtcaataag
caaacaggaagtgttatacacaatcgcaatagtgacagtactgatcaccttagtgatggc
atacatagctcaacagaaaatttacacgaggggcttcatttatctcactccggggaccag
ttaaaggaaatgttccatagtttacatccgcatccagaaggtcactcgatggacgggaca
ggtcaaggtcaggagtgccccggaggtcaaggtcgaacggtcaacaggacgatggtgttc
cgagtaggacagagtgagatcgcgctgatcagccttgacaagaagcagactattattgac
aggaaatttaaaaacatctcgtctgtgtcacagggtcatgtgaagccggaggtgtttggg
ttcatatcccgcgagcccggtaatatattaatctgccatcttctacgatgctgctcaagg
gcattggtggatgagataatgacagcgttgaggacgtcgttccagagcgcgtttcagcag
agcaagctacaaacccagcaaatctgcatcaactgtccgctccatcagtaccataacctg
tgcaaagacatcaatggtcagagtgctgaggcagcatacagtctgttgtgtaaacgaata
cagcagctccctgaaaaggatgcaaccgacctataccactctctcaagaatgaaaaccca
caaagccatgaggagtctgtggaggccctgatgattcacctgaggaaattgtgcgagacc
aagcagcgtgaacacagccacatctccgacacacacaagggtgcacaaaggacagatttt
tacttggtggacatgaaagggaagacgagtaataaatcggcgtttgacttgatacgaaac
agggcacggaagactcttgcggactcgtttgagtcacttcttaccaacgtacaccacaag
aaggaggaggtcaaggaggcatttcgacatcgaagcgggaccaacgaaagtgacactagc
aactttaaccgatccttagacctgacagacaccgacttctccccagccccctcgccaggt
cacatgtccaaggacatggtggccaactttgagttctccagcccacccccttcccccacc
cctgggcgacctcgcagctcaacagttggtgccctgcccgacacccaggcaatggagatg
atgttagaaagacataaaaagaacaaacaggcagagaaaaaagaattggagaagagaagg
cttagtgagagccccatgaaacacatgttcatcttggccaactgcagctctccaagcaag
aaatccagcacccatatgaccccaggggaggatgaccccccggcaacatcatctgaccca
tccccccagggctcatggaggcaggctatctttaacagggttgtcacacccgttaaacac
ctcagcaatcccacacttgaggagtcattaaatgaagatgaagaagggcctcacaagaag
acgtcggaggagttacgggccttgtggaggaaagccattctggagaccttgctactcata
cgcatggagaaggagaatattgacctacaggcccgccaagatgaggctgacctgaaacga
cgtaaactagactatgcagagataaccccatgtctcaaggacgtaacccgctcttgggag
gagctactatccatgccaggtcgtccgcacacgctggtggatcaggataaactaattggc
tatgtgaaacaaggagttcctcagagtaagcgtggtgaggtatggtggtttctggtagag
caacatcgacttcgagtccctgaccttcaggaaaacacgcctgaggtcgactacaacgag
ctgctgaaacaattgaccaatcaccaacatgccatcctcattgaccttgggcggacattc
ccgggtcacccatacttctccctccaactgggcagtggtcaattggccctgtttaacctt
ctaaaggcctacagcctgatggaccatgaagtcggatactgccagggcctcagctttgtg
gccggcatactcctcatgcatatggaggaattgcaggcatttgaagcatggaaacatgtc
atgtataacctcggtctccggaaacaatacaagacaaacatgattgccttacagatccag
ctataccagttgacacgtctgctccatgacaactaccacgacctatacgaacatttcgag
gctcacgacatcgcccccaccctgtatgccgctccctggtttctcacactgtttgcctca
cagtttccactgggatttgtatccagagtatttgatctgatattcatgcagggttcagag
gtcatattcaaggttgccatggtgttgctaggcaaccacaaagagctgatattgcattgt
gacacgtttgagacaattgttgaattcatcaagaccacgctgccggagatgagcatgata
cagatggagagggtcataaaccaggtatttgaccttgacctaagccagcaactgcattca
tacgcggtcgaataccaagtgttgaaggaagagatgatgtattctcctgcgcagggggat
tctgaccagctagcccgccttgaacttgcaaatgacgcgctcacgaaacaaaacatggag
ctgatagataaactacaacatgctcatagccatgaacgcagcttagagattatgattcac
aactttcagacacaggaagcaaagttgaaatctcacattcggactctagagctggagaga
tcggctctattgaacgctgtgcagacattaaaacaattgattcctgagcaggacaggaat
aactttgacattaaccttcccaccctgactcccagcatgcctgtctcaccagtgcatcat
gggagaatagtggggcatgatgggatagcaatcacagatactcttccccaaggaggtagc
atgaatagcaatgagcagacggacagttctagtgaaaaggataatttctcaaagtctgcc
agatttagacccgatagacaaagttga
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