Mya arenaria (softshell): 128228499
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Entry
128228499 CDS
T09995
Name
(RefSeq) DNA polymerase iota-like
KO
K03510
DNA polymerase iota [EC:
2.7.7.7
]
Organism
maea
Mya arenaria (softshell)
Pathway
maea03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
128228499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maea03400
]
128228499
Enzymes [BR:
maea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
128228499
DNA repair and recombination proteins [BR:
maea03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
128228499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_HHH_1
IMS_C
UBM
Cdd1
IMS_HHH
DUF6894
HHH_5
Tox-URI2
Motif
Other DBs
NCBI-GeneID:
128228499
NCBI-ProteinID:
XP_052795800
LinkDB
All DBs
Position
3:complement(68565854..68573048)
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AA seq
779 aa
AA seq
DB search
MDSDEEDWSQPLGVNTRKDVSPVGGYIPSGDTTRRKVGTSLQIHRADNHSRVIVHIDIDC
FYAQVEMLRNPELRTKPLGIQQKYIIVTCNYVARERGLTKLMLVRDAKEKCPDLVLVSGE
DLTHYRNMSYKISNFLQKYCPLVERLGFDENFLDITQLVADRIRQGEEEMTVCGHLYGDG
EQEHSSGGQCGCGCFQRLVVGSHLAGEIREALQTELKITCCAGVAHNKLLSKLVAGTYKP
NQQTTLLPHMTARLLASLNSVRSIPGIGHSSTKRLRELGITTVSDLQTADSSIIEAEFGP
VTMETMKNLSQGIDNTPVVAFGAPQTLSDEDSFRKCSTVSEARAKIAQMLQSLLSRLLED
GRTPHTLRVTVRKMSEVNRYNRESRQCHIPASYFTGFSSETVPLVISKLECLAEGLFLKI
VDVKQPFHLTLINVAFTNLSAKTNTDIASFFSHRPADSKPDMMKERLPNGLSDNDVDESD
EVKNTTTSPSSSLGYGLIPQGVSASKSLPALKTLHSELVEHEGKINNSSDQTQVIVKTKN
VRTSGVMKWLMSPSKIHQSDVLSLENTGAKHSQSVKKRGRDSDQAEDSDMKYKQNKVFKV
GCSCVDEYAFSQHHPNTQQEMNKTSSGKHSENVEGTNIISSSSINYETCRSVPGCSHDVE
SVVVDTIKEPDKVTIPDNIDKEVFLSLPADIQQELVTDWKQRKPCKARYPGKVCTSTSSQ
PQYPFTNKMGVRFGTGNKTLSSQNESKTISNGSQEIEKSSSVPKEGEIDKSRLDKSKPF
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggatagcgacgaggaagactggagtcagccactgggggtaaacacgagaaaggatgtg
agtcccgtgggtggatacatcccttcaggtgacacaactcgtaggaaggttgggacttct
ttgcaaatccatagagctgataatcattcaagagttattgttcacatcgatattgactgc
ttctatgcccaagtggagatgctgagaaacccagagcttcgaaccaagccattaggaata
cagcagaagtacatcattgtaacatgtaactatgttgcacgagagcgaggtctgacaaag
ctgatgttagtgcgagacgcaaaggagaagtgtcccgaccttgtgttggtcagtggagag
gacctcactcactataggaacatgtcttacaaaatatcaaattttctacagaaatactgc
ccattggtagagcggcttggttttgatgagaactttcttgacattacccagctggttgcc
gaccgcatccggcagggggaagaggagatgacagtgtgtggtcacttgtatggggatgga
gagcaagaacattccagtggtggccagtgtggatgtggctgcttccagcgtctagtggta
ggctcacacttggcaggagagataagggaagccctacagacagagctcaaaatcacgtgc
tgtgctggcgttgcccacaacaaactactatcaaaactggtggcgggcacatacaagcca
aaccagcagaccaccttgctgccacacatgactgccaggctgctggccagcctcaacagt
gttcgctccataccgggaataggccacagttcaaccaagagactacgagagctgggaatc
acaactgtgtcagacctgcagactgcagatagctccattatagaagcagaatttggtcct
gtcaccatggaaaccatgaaaaatctcagccagggtattgacaacactccagttgtggca
ttcggtgctcctcagacacttagtgacgaggactcctttaggaagtgttctacagtctct
gaggcaagggctaaaattgcccaaatgttacagagccttctcagcaggcttctagaggat
ggtaggacaccccacaccttgagagtaactgtgcggaaaatgtctgaggtaaaccgatat
aaccgtgagagtcgacagtgtcatataccagcaagctactttactggattctcttcagaa
actgttcctctggtgattagcaagctggaatgtttagcagagggtctgtttttgaagata
gtggatgttaaacagccattccatctcaccctgataaatgtggcattcacaaaccttagt
gccaaaacaaacactgacattgcgagcttcttctcacacagacctgcggattcaaaacct
gatatgatgaaagaaaggttgccaaatgggttatccgataatgatgtggatgagtcagat
gaagtgaagaacacaaccacatctccaagttcctctctcggatatggtttaatacctcaa
ggtgtttctgcatcaaagtctctgcctgctttgaagaccttacactctgaactggtagaa
catgaaggtaaaataaacaattctagtgaccaaactcaagtcattgtgaaaaccaaaaat
gtacgcacatctggtgttatgaaatggttaatgtcaccaagtaaaattcatcaaagtgat
gtgctttctctggaaaacactggtgcaaagcattcacaaagtgtcaagaaaagaggaagg
gactctgaccaagccgaagactctgacatgaaatataagcaaaataaggtatttaaagtt
gggtgtagctgtgtagatgaatatgctttctctcaacatcatcctaatactcaacaggaa
atgaataaaacatccagtggcaaacatagcgaaaatgttgaaggaacaaacataatttct
tcaagctcaatcaattatgaaacctgtagatcagtgccaggttgcagccatgacgtagag
tcagttgttgttgatacaatcaaagagcctgataaagtgactatccctgataacattgat
aaggaggtgttcctgtcactcccagctgatatccagcaggaactggtcacagactggaaa
caaagaaaaccctgtaaagcaagatatcccggaaaagtgtgtacaagtaccagcagtcaa
ccacagtatccatttacaaacaaaatgggtgttagatttggaactgggaataagacgcta
tcgtcacaaaatgaaagcaagacgatcagtaatggtagccaggaaatagagaaatcaagt
agtgtacccaaagaaggtgaaatagataaatctaggttggacaaatcaaaacctttttaa
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