Mya arenaria (softshell): 128228596
Help
Entry
128228596 CDS
T09995
Name
(RefSeq) protocadherin beta-8-like
KO
K16498
protocadherin delta 1
Organism
maea
Mya arenaria (softshell)
Pathway
maea03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
128228596
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
maea01009
]
128228596
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
maea04515
]
128228596
Protein phosphatases and associated proteins [BR:
maea01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128228596
Cell adhesion molecules [BR:
maea04515
]
Cadherins
Protocadherins
128228596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
CcmD_alt
TMEM154
LapA_dom
Motif
Other DBs
NCBI-GeneID:
128228596
NCBI-ProteinID:
XP_052795959
LinkDB
All DBs
Position
3:complement(45896273..45932791)
Genome browser
AA seq
1154 aa
AA seq
DB search
MSLFINLIIIAAVVVIVTATIPPIRFTMTEEEPSGYRVGSVANETQQYLEWDPTDLTYST
EGSTLFSINDETGDIYTLVVIDREHVCEYQSDCMVKMDVAVRSTDNRLFEVISVEIIIED
KNDNTPMFPTDVTKVDIAENSPVGSAFKIELATDKDTGAQNSVQSYELLLNEGSTGYFSL
NITKNLDSTFNLKLILTKELNREVKDSYSVVVIAKDGGNPVKSGTQRININVTDVNDNDP
QFTQTFYNVTIKETSGIHETILYLSANDKDAYENARVSYRISEFYLNNDGLREIFYLVEE
TGELKVKSDLSSYAGQSFKFFVEAFDHGAVPRSSQAEVEVHIQDSGNNAPIVSFSFFSPG
NTGYVNVPENALNQTFVAHVSVTDLDSGENGQIECRISNTHFAIVKMDKGYKVVVNAILD
REVLSTYNLTVTCSDKGTPVMSDSASFFVHITDYNDNRPVFDPQIYRVKLTENNQGTELI
TKVMATDEDDGKNAIFHYVPHEDAMDRFVVDSNTGKVTVNAVFDREVEPVVVFRVLAVDN
GNPALTGTATVFLTLLDVNDNAPTFTESSYKIAVKENQETGSDVFKFRADDKDDGVNAEF
VFSLAPEFVSSVPFVMFSNGQLKTNKQLDREERSRYDFVAIVTDRGNPQQSSRVPVIVSV
EDVNDNQPVITFPRPSNNSVIVSYPDFESEYITTVEAYDLDEGRNKELFYSIVAGNDMDI
FEMDSVFGNLYFKSQIDIGADKIIALDISVKDKGDNPLETIKTLFVELKYTNATFLKSIS
DGANSSNVIISVVVVIITLVISGVIIGVILFLRTLDRKRKEKESNSTSSTLESDFGFTQQ
NPNHTILSVDTLSSGSACEGQDLIKKKEVSFVLDGNDSYEFNQQRQTTSTAAKDKPSKSS
LRYLPQQFPHHASSPASQDARDHMSGSPTVLDSRELQHEANNQLHSLKLQQVILQNRAKQ
WVEQQHQFGTCPDDHHSEGSAETIPSDSGRGCSEEDDMFSTPSADDPKLFELSSPESQRS
SGLIPPPKPYHAVLEPQNSTSIYTKQPWSRRPHLASHRDTRPTQSQLSLNRNLNIRHSGY
LDSVSSINNESQNRMSWGSALYGNVMPMDFTGDSALHSFFDKTPMTYANAYRDDEDTCST
TTSGSYTIYSEEIL
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgttcatcaatctcatcatcatcgcagctgttgttgtgatagtgacagccact
attccgccaatccggtttaccatgacagaggaagagcccagcgggtatagagtgggctcc
gtggccaatgaaacccagcaatatctagagtgggacccaacagatcttacatactccact
gagggaagcacgcttttcagtattaacgatgagactggggacatttatacgctcgttgtg
attgatcgtgaacacgtgtgcgaataccagagtgactgtatggttaaaatggacgttgct
gtgaggtcgacagataatcgcttatttgaggtgatctcggtagaaatcatcattgaagac
aaaaatgacaacacgccaatgtttccaacggatgtaaccaaagttgacattgcggagaat
agcccagttggatctgccttcaaaattgagctcgctactgacaaagacaccggagcacaa
aactctgtccagagttacgaactgttgttaaatgaaggatcgacgggttacttttctttg
aatattaccaagaacttggacagcactttcaatctcaaactcattctaacgaaggaattg
aacagagaggtgaaggactcttacagtgtggttgttattgccaaggatggagggaaccca
gtgaaatctgggacacagagaatcaacataaatgtcacagacgtaaatgacaacgaccct
cagttcacccagactttttacaatgtcactatcaaagaaacatcaggcattcatgaaaca
atcctttatctttctgccaacgacaaagatgcttacgaaaatgccagagtttcttacaga
ataagtgaattttacctgaataacgatggtttacgagaaatattctacctagtcgaagaa
acaggagaactgaaagttaaatctgacctctcttcttatgcgggacaatcatttaaattt
tttgtcgaggcctttgaccatggggctgtaccacggtcttctcaggctgaagttgaagtg
catattcaagactccggaaataatgcccctattgtcagttttagcttcttttcccctgga
aacaccggctatgtgaatgtgccagaaaacgctttgaaccagacatttgtagcccatgta
agtgtcactgatcttgatagtggcgaaaatggacaaatcgaatgcaggatctcaaatact
cacttcgctattgtgaaaatggataagggctacaaggtggtcgtcaatgctattcttgac
agagaagtgctcagtacctacaacctgactgttacctgctcagacaagggaacaccagtc
atgagtgactcagcttcgttctttgttcacatcacagattacaacgacaacaggccagtg
ttcgatcctcaaatctaccgtgttaaactcactgaaaataatcaggggaccgaactgata
actaaagttatggccactgatgaagatgatggcaaaaatgctatatttcactacgtacca
catgaagatgccatggaccgatttgttgttgacagcaatactgggaaggtaactgttaat
gctgtttttgatcgggaagtcgaacctgtggtagtctttcgagtccttgctgtggacaat
ggtaacccagctctcacagggacagctacagttttccttaccttgctcgatgtcaacgac
aatgcaccaacttttacggaatcttcgtacaaaatcgcagtgaaagagaaccaagaaact
ggctctgatgtgttcaagttcagagctgatgataaagatgatggtgttaatgctgaattt
gttttctctcttgccccggaatttgtgagctctgtgccatttgttatgttcagtaacgga
caattaaaaaccaacaaacagctggatagggaggaaaggagtcgctacgattttgttgcc
atagttacggataggggaaatccccagcagagcagccgtgtgcctgtgattgtcagcgtt
gaagatgtaaatgacaaccaaccggttataacattccccagaccatcgaacaacagtgtt
atagtttcctacccagactttgagtcagaatatatcactaccgttgaagcttatgacctt
gatgaaggccgcaacaaagaactgttttactcaatcgttgctggaaatgacatggacatc
tttgaaatggactctgtttttggaaacttgtatttcaagtcacaaattgacattggtgct
gataaaattattgccctggatatttccgttaaagacaaaggtgacaatcccttagaaacg
attaagacattgttcgtagagctgaaatatacaaatgcaacattcttgaaaagtatttct
gacggtgcaaattccagcaacgtcatcatttctgtcgtcgttgtcataataacattggtc
atttccggtgtcattattggcgtaattctgttcctcagaactttggacaggaaacgtaaa
gaaaaagaatcaaacagcacgagctcgaccctggaatcggatttcggttttacccaacag
aacccgaatcacacgatcctctcggtggacactctgtcatcaggttcggcttgtgagggt
caagaccttataaaaaagaaagaagtgagctttgttctcgacggaaatgactcgtatgaa
tttaatcaacaaagacagacaaccagtaccgctgccaaagataagccttcgaagtcatcc
ctgcgttacttgccacagcagtttccccaccatgcctcatcccccgcgtctcaagacgca
cgagaccacatgtccggctccccgacagtgcttgattcccgggagctacagcacgaggca
aacaaccagcttcactccctcaaacttcagcaggtgatactgcagaatcgcgctaaacag
tgggtcgagcagcaacaccagtttggtacgtgcccagatgaccaccacagcgagggatca
gccgagacgatacccagtgacagtggacggggttgtagcgaagaagacgacatgttcagc
acgccctctgctgatgatccaaagctgtttgagttatctagtcccgagtcccagcgcagt
agcgggctgattccaccccccaagccctaccatgctgttctagagccacaaaattccacc
agcatttacacaaagcaaccctggtctcgtagaccccaccttgcctcgcatcgtgacaca
agaccaacacaaagtcagctcagtttgaacagaaatcttaacattcgtcattcaggatat
ttagacagtgtttccagtattaataatgaaagccaaaatcgtatgtcatggggtagtgca
ttatacggcaatgtgatgccgatggacttcacgggtgattccgcgttgcattcgttcttc
gacaaaacacccatgacttacgccaatgcctatcgagacgatgaagacacatgttcaacc
accacctccggaagttacacaatatactccgaggaaatcttgtga
DBGET
integrated database retrieval system
