Mya arenaria (softshell): 128228620
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Entry
128228620 CDS
T09995
Name
(RefSeq) DNA polymerase subunit gamma-1-like isoform X1
KO
K02332
DNA polymerase gamma 1 [EC:
2.7.7.7
]
Organism
maea
Mya arenaria (softshell)
Pathway
maea03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
128228620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
maea03032
]
128228620
03029 Mitochondrial biogenesis [BR:
maea03029
]
128228620
Enzymes [BR:
maea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
128228620
DNA replication proteins [BR:
maea03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase gamma complex (mitochondrial)
128228620
Mitochondrial biogenesis [BR:
maea03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA polymerase
128228620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNApol_Exo
DNA_pol_A
ORC5_lid
Motif
Other DBs
NCBI-GeneID:
128228620
NCBI-ProteinID:
XP_052795992
LinkDB
All DBs
Position
3:71854510..71911872
Genome browser
AA seq
1204 aa
AA seq
DB search
MATTWCKMRELRRLFNTSSKLSARVNEINIQMLSDSLHKQIFRRCEPSLAASQTCLNPES
DEDLAGKVEHIRTMSDAQLRAIKAHLAKHGLWDKQVPLRKDVDLKLPQFLGTNIEEHFRN
IANNQIKDYKALAERLCRYELPQQPPEWAELPGWVRYGEDGVPEPVDYPQDDVLVFDVEI
LVTEGNYPTMATAVSDKHWFSWCSDYLVSDKFRWASKGIGLDDLIPVETGPRSEVNGSSE
SRLVIGHNVAFDRSFVKEQYSVKKSKLRFLDTMSMHIAICGLTSFQRILYKAAETESTTK
VVLEYKQKRKERNTLTTDDWKNQSSLNNLGDVHALHVGGTKLDKDPRDIFIEGSMADVRD
NFQDLMTYCASDVSATFNVFKALWPQFCERFPHPVTLAGMFEMLTGYLPVNENWERYINQ
SNTVYEDMQNQCKQLLMRIANDACQYLDNDRYKADPWLWDLDWTVKPFRIKKPKPFTKKQ
KQAIEDKKLFDGDAGNQEKSCIEEVLALQERHFKVGNRLVGYPEWYKDLCQKPTDEDWSP
GPSGLSPQTRVTPKLLRLTWDGFPLHYDDTHGWGYLVPGRHDNLVTDEENKALLEGKQLP
KERMFPYRHLCKILNFQPENINEQEDDTDESPQSSGPIEDLNSSADSVWAVNDLADLAPG
VASDSVWAVNDLADPSPRNTSDTVWAYDDVSDKAGDEFRMGKLIQGLEKNPRDKFQKLMD
LQEPPKRRRMAKTHCPSHVGDGPHNSVNIPGCWFFKIPHKDGAEKRVGNPLAKDYLMHME
DGTLSTLSGPGANMVLRLAKTCSYWKNNQKRIEGQMAVWLKDEELPHEILRSEDYVEGSS
LGAIVPRIIPAGTVTRRGVESTWLTASNAYTDRIGSELKAMVQSPPGYCFVGADVDSQEL
WIGALLGDSNFGNTHGCTALGWMTLQGTKKDGTDLHSRVADTVGISRDHAKVFNYGRIYG
AGQTFAEKLLMQFNHRLTRAEAKDKAQLMFSTTKGKRSKRGWIGGSESAMFNKLEAIAQS
GYPQTPVLGCHISKSLEPDTVFGEFMTSRINWVVQSSAVDYLHLMLVSMQWLFEEYGING
RFAISIHDEVRYLVVEEDRHRAALALQITNLLTRSMFAHSLGMNDLPLSVAFFSAVDIDR
CLRKEVVMDCVTPSNPHGLHMGYQIPMGEALDIHEIIEKTGGTLERPENTIPTQAEQEQV
HLRG
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaacttggtgtaagatgagggagttgagacgtctgttcaacacatcgtctaaa
ttgtctgccagggttaatgagatcaacatacagatgctttcagattcactccacaaacag
atatttagaagatgtgagccatctttagcagcaagccagacctgccttaaccctgagagt
gatgaagacttggcaggaaaggttgaacatattcgaacaatgtcagatgctcaactgcgt
gccataaaggctcatctggcaaaacatggcctctgggacaagcaagtgccactgaggaaa
gatgttgatctgaaactaccacagtttctaggtacaaatattgaggaacacttcaggaat
attgcgaacaatcagataaaagactataaggcactagctgaaaggctgtgtagatatgag
ttaccacagcaacccccagaatgggcagagttaccgggctgggtgcgctacggggaggat
ggagtgccagagcctgtggattacccacaggatgatgtgctcgtgtttgatgtggagatc
cttgttactgagggaaattatccaaccatggcaacagcagtctcagacaaacactggttt
tcttggtgctcagactacctggtgtcagacaagttccgctgggcttccaaagggattgga
ctggatgacctaattcctgtggaaactgggccaaggtctgaggtcaatgggtcatcagag
agccggctggtgattggccacaatgtggcctttgatcgatcatttgtgaaagagcagtac
agtgttaagaagtctaagttgcgtttcctagacacgatgtcaatgcacattgcaatatgt
gggttgacgagcttccagagaatcctgtacaaagccgcagaaactgagagcaccaccaag
gttgttctggagtacaagcagaaacggaaggagcgaaatacattaactaccgatgattgg
aaaaaccagagctctctcaacaaccttggagatgtccacgccctgcacgtgggtgggacc
aagcttgataaggacccacgggatatcttcatagagggaagcatggctgatgtccgcgat
aactttcaggatttgatgacgtactgtgcaagtgatgtgtcggccacattcaatgtcttc
aaagctctttggccacaattctgcgaacggtttccacaccctgtgacattggcagggatg
tttgagatgttgactggttacttacctgtgaacgagaactgggagcgatacataaaccag
tccaacacagtgtacgaggacatgcagaaccagtgtaaacagctgctgatgaggattgct
aacgatgcatgccagtacctcgacaatgacaggtacaaagcagacccatggctgtgggac
ctggactggactgtaaaaccattccgtatcaagaaacctaaaccatttaccaagaaacag
aaacaggcgatagaagataaaaaactttttgatggtgatgctgggaaccaggagaagagc
tgtatagaggaagtactggccctacaggagagacacttcaaagtcgggaaccggctggtc
ggatatccagagtggtacaaggacttatgccaaaagcccacagatgaggactggagccca
gggcctagcggtttgagtccacaaaccagggttacacccaaactgctgcgtctgacctgg
gacgggtttcccctgcattatgatgacactcatggctgggggtacctggtgcccggtcgc
catgacaatctggtcactgatgaggagaataaagctctcttggaggggaaacaactgccc
aaagagcgaatgtttccttacaggcacctttgcaagattctcaacttccagccagaaaac
attaatgagcaagaagatgacacagatgagagtccacaatcatcaggccccatagaggac
ctcaattcctctgcagactctgtttgggcggtgaatgacctggctgacctcgcccctggg
gttgcctctgactctgtttgggcggtgaacgacctggctgacccctctccaaggaatacc
tctgacactgtttgggcatacgatgatgtgtcggacaaggcaggggatgagtttcgaatg
ggcaagctgatccaggggctagagaaaaatcccagggacaagttccagaaactcatggac
ctgcaggaaccacctaaaagacgccgtatggcgaagactcactgtcccagccatgtggga
gatggtccccataactcggtcaacataccgggttgctggttcttcaaaataccacacaag
gatggtgcagagaagcgtgtgggtaacccactggccaaggactacctcatgcatatggag
gatggcacgctgtctaccctctctggccctggggcaaacatggttctccgccttgccaag
acctgtagctactggaaaaacaaccagaaacgaatagagggtcagatggctgtgtggctg
aaagacgaggaactgccgcacgagattctcaggtcagaagactatgtcgagggtagcagt
ttaggggccatagttcctcggattattcctgcgggcactgtcacgcggcgaggggttgaa
tcaacgtggctcactgccagcaatgcttacactgaccgcattggaagtgaattgaaggca
atggttcaatccccgcctggctactgttttgttggagctgatgttgactcacaggaactc
tggatcggggctttgctgggggactctaactttggaaacacacatggatgtacagccttg
ggctggatgactctgcaaggaactaagaaggacggcactgaccttcacagtcgtgtagca
gacacagttgggatatcacgagaccacgccaaggtgttcaactatggtcgtatttacgga
gcagggcagacgtttgccgagaagttgctaatgcagttcaaccaccgcctgacccgggca
gaggcgaaggataaagctcaactcatgttctctactaccaagggtaaaaggagcaagcgt
gggtggatagggggtagtgaaagtgccatgttcaacaaactggaggccatcgcccaatct
gggtacccacagacacccgttttgggctgccacatcagcaagtctctcgaacctgacact
gtctttggagagtttatgacatcccgtatcaactgggtggtacagagctcggcagtagac
tatctgcatctgatgcttgtttccatgcagtggttgtttgaggaatacggtatcaatgga
cgctttgccatctccatacatgatgaagtcaggtaccttgttgtggaggaggatcggcat
cgagcagcccttgcccttcagattaccaaccttctcacacgctccatgttcgctcacagt
cttggcatgaatgaccttcctctgtcggtagcattcttcagtgcagtggacattgaccgg
tgcttgcgtaaagaggttgtgatggattgtgtgaccccgtccaacccccatggcctacac
atgggataccagataccaatgggtgaggccctagacatccatgagatcatagagaagaca
ggcgggacccttgagaggccggaaaatactatccccacgcaagctgaacaggaacaagta
cacttacgaggctaa
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integrated database retrieval system
