Mya arenaria (softshell): 128228638
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Entry
128228638 CDS
T09995
Name
(RefSeq) cartilage oligomeric matrix protein-like
KO
K04659
thrombospondin 2/3/4/5
Organism
maea
Mya arenaria (softshell)
Pathway
maea04145
Phagosome
maea04512
ECM-receptor interaction
maea04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128228638
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128228638
09142 Cell motility
04820 Cytoskeleton in muscle cells
128228638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
maea04131
]
128228638
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
maea04147
]
128228638
00536 Glycosaminoglycan binding proteins [BR:
maea00536
]
128228638
Membrane trafficking [BR:
maea04131
]
Endocytosis
Phagocytosis
Opsonins
128228638
Exosome [BR:
maea04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128228638
Exosomal proteins of colorectal cancer cells
128228638
Exosomal proteins of bladder cancer cells
128228638
Glycosaminoglycan binding proteins [BR:
maea00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
128228638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
EGF_3
cEGF
EGF
COMP
Motif
Other DBs
NCBI-GeneID:
128228638
NCBI-ProteinID:
XP_052796018
LinkDB
All DBs
Position
3:82442159..82456274
Genome browser
AA seq
1108 aa
AA seq
DB search
MTLANDYIQCHSIYIEAVILINRMVECSGWISVLVATLCVCTRSRCSAKAPEKVSVDGYT
DAFILNPDLFLMGQTSGGRSQNLMLVRNYWHTDSTPATSFRVLWDDSSNSIMIVIWTRDN
RNYQTSFMLDRLDPGQHTIMLQMSELNRNTNRLRLFIDCKPVGEETTEVPIREALIGRIV
VDQHESFTLYSRVDLQTMLQFMDCDPLSIPVATLPVLPDWVRERNLDNLLVGTNVRITAP
GGGEKRESENRIPDTDPLYHTMSQSIRELTRVMQTLNRDMQMQTRETRHLYEVMRQCEMC
RRPERQVQQTVPMCRENPCFQGVVCTDTDRGYRCGDCPRGYYGDGIRCARIPNCADNPCF
TGVQCYDVSNGYRCGPCPPGLSGDGRRGNCRVPRVTCESQPCYPGTSCVDTAEGFRCGRC
PRGYEGNGTHCKDINECVVHTPCYESRACVNAEGSFRCEECPTGFYGEPVGGAGLEEAAA
RKQVCRDVDECQLEGSLSPCVEFSQCYNTIGSYKCGDCVDGYTGNQTVGCFRRVTVCPDL
TECNEYARCVSRPGITGFLCQCTVGYAGDGQECGRDTDIDGTPDQRLICTDRRCREDNCR
LVPNSGQEDADADGLGDACDEDMDNDGIPNSPDNCPLTANPDQTDTDPDESGDACDNCPS
VPNPGQYDTDRDGLGDACDPDMDNDGVLNEEDNCPRVVNPDQADSDNDTVGDACDNCLSD
PNPDQIDSDKDLLGDVCDTNDDSDLDGVQDTRDNCPSDVNADQRDTDTDGEGDICDVDDD
GDDVIDDDDNCQYVYNPDQRDDNDDSVGDACEGDSDGDGAPDSYDVCPENGDLFATDFRA
FQTVILDPVGDSQIDPNWIILNEGAEIVQTLNSDPGIAVSYSGFSGVDFSGTFFVNTDTD
DDYAGFVFSYQDSASFYAVMWKKERQTYWHSTPFRAVAEPGIQLKRIRSSTGPGEIMRNA
LWHTGDTPDQVKLLWTDPRNVGWKERTAYRWELIHRPAMGLMRVFLFEETRLVADSGNVY
DHELKGGRLGVFCFSQEMIIWSDLVYRCNEYVPPGMLGAGAAPLEITPVDDGSEATDEEE
RRKQRRKDRKKKKKPGPDGEPGEEEIDL
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgacacttgccaatgattatatacagtgtcattccatttatattgaggctgtgattcta
ataaacagaatggtggagtgttctggttggatctcagtacttgttgcgactctatgtgtg
tgtacgaggtcacggtgttcggctaaagctccggagaaggtgtcggtcgatggctacaca
gatgcgttcatcctgaacccggacctgttcctgatgggccagacttccggtggccgctca
cagaacctgatgctggtgcgcaactactggcacacggacagcacgccggccacttccttc
cgcgtgctctgggacgacagctcgaactctataatgatagttatttggacacgtgacaac
cgaaattaccagacgtcatttatgctggatcggctggatcccggccagcacacaatcatg
ctgcaaatgagtgaactaaaccggaacacaaatcggctccggctatttatagactgcaag
cctgttggggaggagaccacggaggtgccgatacgagaggcgctcatagggaggattgta
gtggatcagcacgaaagtttcacgctgtactcgcgggtggacctacagaccatgctgcag
tttatggattgcgaccccttgtctattcccgtagcgacacttccggtgctaccagactgg
gtccgcgagcggaacctcgacaacctgctggtcggtacgaacgtccgcatcacggccccg
ggcggaggcgagaaacgagagagcgaaaacaggataccggacacagaccccttgtatcac
acgatgagccagtctatacgggaactgacccgggtcatgcagacgcttaatagagacatg
cagatgcagacccgagagacgcgtcacctttatgaggtcatgcggcagtgtgaaatgtgc
cgccgaccagagaggcaggtgcagcagacggtaccgatgtgtcgggagaacccctgtttt
caaggtgtggtttgcacggatacggaccggggatacaggtgtggtgactgtccccgcggt
tactatggagacggcatcagatgcgcgcgcataccgaactgcgctgacaacccctgcttc
acgggggtacagtgttacgacgtgtctaacggctaccggtgcggcccctgtccaccagga
ctgagcggggacggacggagaggcaactgtcgagtcccgagggttacttgcgagtcccag
ccctgctatcccgggaccagctgcgtggacacagccgaaggtttccgatgtgggaggtgc
cccagggggtatgagggcaacggaacacactgtaaagatatcaacgagtgcgtagtgcac
actccgtgttacgagtctcgcgcatgtgtgaacgcggagggcagtttccggtgtgaggag
tgtccaacgggcttctacggtgagccggtaggtggtgcggggctggaagaggcggccgcc
aggaaacaggtatgccgggatgtggacgagtgccaattggagggatctctctctccctgt
gtggagttctcgcaatgctacaacactatcggttcctacaaatgtggtgattgtgtggat
ggatacacggggaaccagacggtcggctgcttccggcgcgtaacggtgtgtccagatttg
actgagtgtaacgaatacgcccgatgtgtctcccggcctggcatcaccggcttcctctgt
cagtgcacggttgggtacgcgggcgacggacaggagtgcgggagggacacagacattgac
ggcaccccggatcagcgccttatctgcacggaccgcaggtgtagagaggacaactgccgg
ctggttcccaacagcggccaggaagacgcagacgccgacggtctcggtgacgcctgtgat
gaagatatggacaacgacggcattccaaactcaccggacaactgtccgttgacggcgaat
ccggaccagacggacacagacccggacgagtcgggtgacgcgtgcgacaactgtccgtcc
gtccctaaccctgggcaatatgatacggatagggacggcctcggggacgcctgcgacccg
gatatggataacgacggcgtactaaatgaggaggacaactgcccccgggttgtgaacccc
gaccaggcggacagcgacaacgacaccgtcggggacgcctgtgataactgtctcagcgac
cctaacccggaccagattgatagcgacaaggatttgttaggtgatgtctgcgacaccaac
gacgacagtgatcttgacggtgtacaagacacgagggacaactgtccgtccgacgttaat
gcggaccaacgggataccgatacagacggagagggcgacatctgcgacgtcgatgatgac
ggtgatgacgtcatcgatgacgatgacaactgtcagtacgtctacaacccggaccagagg
gacgacaacgatgacagtgttggtgacgcgtgtgagggcgacagtgacggtgacggagcg
ccggatagttatgacgtatgtccagagaacggcgatctgtttgccactgacttccgagcg
ttccaaaccgttatcctcgaccccgttggagactcacagatagatcctaactggatcatc
cttaacgagggtgccgaaattgtgcagactttaaatagcgatcctggtattgccgtcagc
tatagcggttttagcggtgttgacttcagcggcacgttcttcgtgaacaccgacaccgac
gacgactatgccggctttgtgttcagttaccaggacagcgcgagtttctatgccgtgatg
tggaagaaggagcgacagacatactggcactccacgccgttccgcgcggttgcggagccg
ggcatccagctgaagcgcatccgatcctccacaggccctggggaaataatgaggaatgcc
ctctggcacaccggcgacacgccagaccaggtgaagctgttatggacggacccgcggaac
gtgggttggaaggagaggacggcctaccgttgggagctgatacaccggccagccatgggg
cttatgagggtgttcctgtttgaagagacgcggctggtggcggactcaggaaacgtttac
gaccacgagctgaagggtggccgcctgggcgtgttctgcttctcacaggagatgataatc
tggtcagacctcgtctacagatgcaatgaatacgtgccgcctggcatgttgggagcggga
gccgcgcctctggagatcacgcccgtggacgacggaagtgaagctacagatgaggaagag
aggcggaaacagcggcggaaagacaggaagaagaaaaagaagcctggtcccgacggtgag
ccgggggaggaggaaatcgatttgtaa
DBGET
integrated database retrieval system
