Mya arenaria (softshell): 128228678
Help
Entry
128228678 CDS
T09995
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
maea
Mya arenaria (softshell)
Pathway
maea04140
Autophagy - animal
maea04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128228678
04148 Efferocytosis
128228678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
maea04131
]
128228678
Membrane trafficking [BR:
maea04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
128228678
Hops complex
128228678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
zf-C3HC4_2
zf-RING_2
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_EML_2
zf-rbx1
zf-C3H2C3
zf-ANAPC11
PEX14-like_2nd
LEH
TPR_11
zf-RING-like
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
128228678
NCBI-ProteinID:
XP_052796081
LinkDB
All DBs
Position
3:87152408..87168397
Genome browser
AA seq
923 aa
AA seq
DB search
MAAFLQWRKFNFFDREPVKDPNTNEIFNELKDVNVSTCASGRGQLIVGDCDGIIHFVSRS
LQITKFTAYNIRVTHLFQLKQSQSNLLISIGEDEQGTNPLIKVWNLDKLDKGVPICTRIC
RAIPANKPTPVTCITVHENLNYMAVGFQNGSVVMFKGDVKSDRHSKQSVVYESSKPITGL
SFKTLGKNIVLFVATETIVLSINISGKDKTPTLVLDDFGCRQGCCVMSDVSQDNQFVIGR
DDAVYFYQPDGRGPCLAFEGEKFQLHWFRNYLVTVGKDTKSFAKAPIISRGGQNVDMHVV
TVYDIQNKFIAYSAPYPDVIDILSEWGSLYIIAGDRKLYQLQEKDTQTKLEMLFKKNNYT
LAISLAKSQQYDQDGLIDIFTQYGDHLYDKGDHDGAIDQYIKTIGKLEASYVIRKFLDAQ
RIHNLTKYLQALHTAKMATEEHTTLLLNCYTKLKDVSKLDEFIMTKDREVDFEVETAIRV
CRQANYYEHALFLANKHHLHEWYLKIQLDDIRDYCKALEYIGRLEFEEAECNVIKYGKIL
MAERPEEMTELLKRLCTDYKPTDRPLVDATELEGASPHTSQRAPAEQFIHIFVNNSAKLT
EFLEHMIALNSNSCCLLYNTLLELYLHDVTHQQNQQAKDCKQKKTLELLRNPQANYDLDQ
ALVLCQMNNFKEGILYLYEKARLYQQILRYHMDNDAYDLVIQTCNNFGNQDPSLWVQALS
YFSKKENLKQQLGVVLHNIDKKNLLPPLLVIQTLAHSPTATLSVIKNYVIRKLQSETDQI
TEDERLIKQYQEDTEKKRQQIEELKTTAKIFQNQKCAICNHPLDLPSVHFLCEPHSFHQH
CFENYADNENECPVCMAENRKIMDIIRAQEHGRDLHETFHNQLERAQDGFSVVADYFGRG
VFNKVTLITDSPGRLAALQPKYP
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggcagccttcctacaatggagaaaattcaacttttttgaccgagagccagtgaaagat
ccaaacacaaatgaaattttcaatgaattgaaggatgtaaacgtgagcacttgtgcaagt
ggcagaggtcagctgattgttggcgactgcgatggaatcatccactttgtgtctcggtct
ctacaaatcacaaaattcactgcctacaacatccgcgtcacacatcttttccagctgaaa
cagagccagagtaaccttctcatttctattggggaagatgaacaaggaactaatcctctc
attaaagtgtggaatcttgacaagttggacaagggtgtacctatatgcacaaggatctgc
cgtgccattccggccaacaagccaacccctgtaacctgcatcactgtgcatgagaacctc
aactacatggctgttggtttccagaatggaagtgtggtgatgtttaagggcgatgtgaaa
tctgacagacacagcaagcagtcagttgtgtatgagagtagcaaaccaataacagggctc
tctttcaaaactcttggcaagaatattgtgctatttgttgcaacagagacaatagtgctg
tcaataaatatcagcggaaaggataaaactccaactcttgtcttagatgactttggatgc
cgtcagggctgctgtgtgatgagtgatgtaagccaggataaccagtttgtaattggcaga
gatgacgcagtgtacttctaccagccggacggtcgtgggccatgccttgcgtttgagggt
gagaagttccagctgcactggttccgcaactacctcgttaccgttggcaaagataccaag
tcatttgcaaaggcccctatcataagtcgcggtggtcaaaatgtggacatgcacgttgtt
actgtgtacgacattcagaacaagtttattgcgtacagtgccccctatcctgatgtcatt
gacattctcagtgagtggggctccctctacatcattgctggagacagaaagttataccag
ctacaggaaaaagacacccagacaaaactggagatgctctttaagaagaataactacact
ctggccataagccttgccaagagccagcagtatgaccaggacggtcttattgacatattt
acacagtatggggatcatttgtatgacaaaggggatcatgatggcgccattgaccagtac
atcaaaactattggcaaactggaggcttcctacgtcatcagaaaattcctagacgcccag
cggatacacaacttgaccaagtacctgcaggcgctccacactgccaagatggccactgag
gagcacacaacactcctcctcaactgctacacaaagctcaaagatgtatccaagcttgat
gagtttatcatgacaaaggaccgtgaggttgattttgaggtggagacagcgatccgtgtg
tgtcggcaggctaactactatgagcatgcgctgttcctggctaacaagcaccaccttcat
gagtggtacctcaagatccagctggatgatattcgtgactactgcaaggcactggaatac
attggcaggcttgagtttgaagaggcagagtgcaatgtgattaagtatggcaagatcctg
atggctgagagaccagaagagatgacggagctactcaagaggctgtgtacagactacaag
cccactgataggcctttggttgatgccacagagttagagggggcctctccacacacgagt
cagcgcgcccccgcagaacagttcatacacatcttcgtgaacaattcggctaaactcact
gagttcctcgaacatatgatcgctctgaacagcaactcctgttgtctgttgtacaacacg
ctgcttgagctgtatctgcacgatgtcacgcaccaacaaaaccaacaggcaaaagattgc
aaacagaagaaaactttggagctgcttagaaacccacaggccaactatgatctggaccag
gccctcgttctgtgccagatgaacaacttcaaggagggaatcctctacctctatgagaag
gcgcggctgtatcagcagatacttcgttaccacatggataatgatgcatatgacctcgtc
atacagacctgcaacaactttgggaaccaggaccccagcctctgggtacaggctctctcc
tacttctcgaagaaggagaacctcaagcagcagcttggtgttgttctacacaatattgac
aagaaaaatttgttaccaccattactggtgattcagacacttgcccacagcccaactgcc
accctctctgttatcaagaactatgtgatccgcaagctccagagtgagacagatcagatt
acagaagatgaacgcttgatcaaacagtaccaggaagacacagaaaagaaacgacagcag
atcgaggaactcaaaacaacagccaagatcttccagaaccagaagtgtgcaatctgcaac
cacccactggacctgccatccgtgcacttcctgtgtgagccacactctttccaccagcac
tgttttgagaactatgctgacaatgaaaatgaatgtccagtctgtatggcagagaatagg
aagataatggacattattcgagcccaggagcatgggcgtgacctacatgagacattccac
aaccagctggagagagcccaggatggattctctgtagttgctgactactttggcaggggc
gtgtttaacaaggtgacgctcataacagactcaccaggcagacttgctgccctacaacca
aaatacccgtaa
DBGET
integrated database retrieval system
