Mya arenaria (softshell): 128228802
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Entry
128228802 CDS
T09995
Name
(RefSeq) homeobox protein CHOX-CAD-like
KO
K09312
homeobox protein CDX1/4
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
maea03000
]
128228802
Transcription factors [BR:
maea03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
128228802
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
TMEM52
Motif
Other DBs
NCBI-GeneID:
128228802
NCBI-ProteinID:
XP_052796265
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All DBs
Position
3:11581917..11590029
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AA seq
345 aa
AA seq
DB search
MSAMVMSVDQPQVAGMFQRYPTPPPLNYPFNGFGYGGPGGQHPQDYNQFQVPDNGVQHPW
YMYGARSDEWGYGGSGVSGAQTAMTSTPTAMGGYPYRPVGLDYTQPGVQAPSDSPADTSS
SSSSTGSPTNKQLRPPYDWMKKASYQSAPISGKTRTKDKYRVVYSDHQRLELEKEFHYSR
YITIRRKAELAQTLQLSERQVKIWFQNRRAKERKQNKKREENQVLKMASDLSDLSDDSKH
HMTSQMNMVAALPQHQVQMTAPSPNAMHAHNPFSYPEQVHMSPQNALSPHTHMTGSGGQF
SSPNHLQLPISPGNDHPGAAPPQSCSVSPQPLAIKTDVDAIDAHE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctatggtgatgagtgttgaccagccgcaggtcgccgggatgtttcagcgctat
ccgacgccgccgccattaaactatcccttcaacggttttggttatggcgggcccggcggc
cagcatccacaagactacaatcagttccaagtacccgacaatggagtccagcatccatgg
tacatgtacggcgcccgctccgatgaatggggctatggcggatccggcgtatccggcgca
cagaccgccatgacgagcacaccgacggcgatgggcggctacccctaccgtccagtgggt
ctggactacacgcagcctggggttcaggcaccctccgattcccccgcagacaccagctca
tccagttcctccaccggttcgccaaccaacaagcagctgcggccgccatatgactggatg
aagaaggccagctaccagtctgctcccatttccggcaagacgaggactaaagacaagtac
cgcgtggtgtacagcgaccaccagcgcctggagctggagaaggagttccactacagccgc
tacatcaccatccgccggaaggccgagctcgcacagacattgcagctttcagagagacag
gtgaagatctggttccaaaatcgtcgcgccaaggaacgaaagcagaacaagaaacgcgag
gagaatcaggttcttaagatggcctccgacctctccgatctgtccgatgactcaaaacat
catatgacgtcacagatgaacatggtggcagcacttccgcagcaccaagtccagatgacc
gcgccatcacccaacgccatgcacgcacataatccgttcagctacccagagcaagtgcac
atgtcaccacagaacgcgctgtcaccgcacactcacatgacaggaagtggcggtcagttc
tcctcccccaaccacctccagctgccgatctcccccggaaacgaccatcctggcgccgcc
cctccacagtcctgctctgtgtctccacagccgcttgccatcaagacagatgtggatgcg
attgacgctcatgagtga
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