Mya arenaria (softshell): 128228842
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Entry
128228842 CDS
T09995
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3-like
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
maea
Mya arenaria (softshell)
Pathway
maea03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128228842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
maea03041
]
128228842
Spliceosome [BR:
maea03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
128228842
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
Motif
Other DBs
NCBI-GeneID:
128228842
NCBI-ProteinID:
XP_052796317
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All DBs
Position
3:complement(2119042..2135898)
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AA seq
650 aa
AA seq
DB search
MSLTDREWDDLKALLDKAVNKFLGFSEPSLVTAALKCIDNGYDEKETADKLQAFLDERQA
PMIAERLFDVWDSYRSSSKTHKTKRKKDDYDDEVEEVKKKPKFTEQPDNPDPSPGQLTEE
KIKEMMQNAQKMIQERKAQLMGNQQPPPTTQNTQAQKYMNDAKEKAKRANELQAQIQARL
ANMAGLPAPMKGMPPVKSTDKKQIPDVQKALPSSQPTPLILDSEGRTIDAKTGEAITLQH
YAPTLKANIRAKRREQFKGLIDAPPEEISASKFFDPRVSGQNAQRQKRGFRFHEQGKFEQ
LAQRLRTKAQLDRLQSEISHAAKRTGIASAAKLATIAPKQELAAGEIPDVEWWDSFVIRT
VSSYDAVFEEGTDLRSRLEGITHLVEHPIQMKPPDEPEKEPLIPMYLTAAERKKLRRQNR
TEAQKELQEKIRLGLAPPMEPKVRMANLMRVLGSEAVQDPTKVEAHVRAQMAKRQRGHEE
ANAARKLTKEQRRDKKINKIKEDTSLGVHVSVYRVNDLTNPAKKFKVETNANQLYMTGIV
VLFKDCNVVVVEGGPKQQRKFRRLMLHRIKWAEDKQKKKKDEDEGDDVDNTNKCVLVWEG
TTVNRAFTEMKFKVCPTEAFAREQFRKSNVESYWDLAFSGAVLENAGEEL
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaacagatcgggaatgggacgacttgaaggcattacttgacaaggctgtgaac
aagttcctgggtttcagtgaaccctctcttgttacagcagcactcaagtgtatagacaat
ggatatgatgagaaggaaacagcagataaactgcaggcgtttctggatgagaggcaggct
cccatgattgcagagcggctgtttgatgtttgggacagctaccgttcatccagcaagaca
cacaaaaccaagaggaaaaaggatgattatgatgatgaagtggaagaggttaagaagaaa
cccaaatttacggagcagccggacaacccggatcccagccctggacagcttacagaggaa
aagatcaaggaaatgatgcagaatgcccagaaaatgatccaggagaggaaagctcagtta
atgggcaatcagcagccccctccaactacacaaaacacccaggcccagaagtacatgaat
gatgcgaaagagaaggcaaagcgggcgaatgaattgcaagcccagatacaagcccgacta
gctaacatggctggtttacctgcgcccatgaaaggcatgccgcccgtcaaatctacagac
aagaaacagatacccgatgtgcagaaagcattgccctcttcgcagcccactccactgatc
cttgactctgaaggccgtacaatcgatgctaagacgggagaggccatcacattacagcac
tatgccccaacactgaaggccaacatcagagccaaaaggcgagaacagttcaaagggttg
atagatgctccccctgaggagatcagtgcctcaaagttctttgatcctagagtcagtggg
cagaatgctcagagacagaagcggggctttaggttccatgagcaaggcaagttcgagcaa
ctggctcagaggcttcggacaaaggctcagctggatcgacttcaaagtgagatttcacac
gcagccaagaggactggtattgcctcagcagctaaactggcaaccatcgctcccaagcaa
gaactggctgcgggtgagataccggatgttgaatggtgggacagcttcgttatccgtacg
gtgtcatcatatgacgcagtgtttgaggaaggaacagacctgaggtctcggctggagggc
atcacccaccttgtagaacaccctatacagatgaaacctcctgatgagccagagaaggag
ccattgatcccaatgtacctgacggccgcggagaggaagaagctgcgacgacagaatcgg
acagaggcacagaaggaactccaggagaagattcgcctcggcctggcaccacccatggaa
cccaaagtgcgtatggcaaatctgatgagagttcttggttccgaagccgttcaagatcct
acaaaagtggaggcacatgttcgggctcagatggctaaacgacaaagaggtcatgaggag
gcgaacgctgccagaaagctgacaaaggaacaaagaagagataagaaaatcaataaaata
aaagaagatacctcgctgggagttcacgtgtcagtatacagagtgaacgatctcactaat
ccagcaaagaagttcaaggtggagacaaacgcaaatcagctgtacatgactggcattgtt
gtcttgtttaaagactgtaatgtggttgtagtcgagggaggtcctaagcaacaaagaaaa
ttccgaaggttgatgctacatcggataaaatgggcagaggacaaacagaagaagaaaaaa
gacgaagatgaaggtgatgatgttgacaatacaaacaaatgtgttcttgtttgggagggc
actacggtgaacagggcatttacagagatgaagttcaaggtctgtccgacagaggcattt
gcgcgtgagcagttcaggaagagtaacgtggaatcttattgggacctcgcattcagtggg
gctgtgctcgagaatgccggagaggagttgtga
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