Mya arenaria (softshell): 128228848 Help Entry 128228848         CDS       T09995                                  Name (RefSeq) DNA-binding protein SMUBP-2-like   KO K19036   ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3] Organism maea  Mya arenaria (softshell) Brite KEGG Orthology (KO) [BR:maea00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:maea03009]     128228848    03012 Translation factors [BR:maea03012]     128228848 Enzymes [BR:maea01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      128228848     5.6.2.5  RNA 5'-3' helicase      128228848 Ribosome biogenesis [BR:maea03009]  Eukaryotic type   Other ribosome biogenesis factors    128228848 Translation factors [BR:maea03012]  Eukaryotic type   Initiation factors    Initiation associated factors     128228848 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_11 AAA_12 SMUBP-2_HCS1_1B R3H AAA_30 AAA_19 zf-AN1 Viral_helicase1 ResIII AAA_16 nSTAND3 DEAD SLFN-g3_helicase IstB_IS21 AAA_22 Herpes_ori_bp ABC_tran AAA_25 UvrD-helicase Zot PhoH AAA Helicase_RecD SRP54 NPHP3_N ATPase Znf_XAF1_N PIF1 MeaB UvrD_C_2 Flavi_DEAD CbiA Casc1_N Motif Other DBs NCBI-GeneID:  128228848 NCBI-ProteinID:  XP_052796336 LinkDB All DBs Position 3:68126718..68148483 Genome browser AA seq 1040 aa AA seqDB search MSVEAFVDKTHKLLEKERSSEIEQTRLLHEKLPPKELQRRGVCLLKLHIGERKSGMFGRV LVVLETHLDALPSHTFSAGDIVGLDASSSVGQSDSLGSGIVTRVSPTAVTVAFDDSVDIF SLESGLHDYYKITKLANDVTYKRLKRTLEGLSHGRHEVSQQLISVLFGDQPLSPPLTLKE LVYSNTSLDDSQQEAVQFALSQREVAVVHGPPGTGKTTTVIEIILQAVKQGHKVLACAPS NIAVDNLVDRLSRTKHRIVRLGHPARLLPHLQKFSLDAILARSDEAQLVVDVRKDLDKAL SDLKKTRDRGQRQRAREDMKHLRKELRQRETTATRDILKRADVILVTLTSATDAGPMKLL EESHFDLTVIDEVSQALEAACWIPLLRSRKCVLAGDHLQLPPTILSNEAAQEGLSVSLME RVLEMYGDSVMRMLTTQYRMHHMIMDWSSQQLYQSKLVAHPSVSEHLLRDMDGVEENETT SSPLLFIDTAGCDLPELDLPEEISKGNEGEADIVKLHVEKLIESGLKQEDIAVIAPYNLQ VELVRLRLGEKYPGVEVKSVDGFQGREKEAVVISLVRSNPKGEVGFLSEKRRINVAVTRA RRHLAVVGDSMTVSSDPFLKTLVEYMTTVGETHSATQYNTDGDITRPEHISDLISLNKQA SNKGAKPKTSKKIHDKPRQNKKPSERKEENQRKGSVLEEGDERVKELQSQLEVFVANTGV HVLEFAPTLTSRDRLIVHEIAEKMGLSHVSRGIGEERHIVVGRPDGAAMETESPYQRAVQ AESVEEGGSVDKDTRVEVTDVLEKEVVQTKNKKRKNKIKNTDCVEKNMLIDLDKENQTKV PSNDVIEICSNSSKSSEIARSDGKVSCSICQKDVIKANLMMHELHCAKRQIGAKSENVSG AERHSKNALKSSSHRQFDKELSNRIQKVDDDDIDALIATVQKMDSSCCFKKCKTSVATLF QVCSHCEGRYCLSHHIPEVHGCGDAARAQARARISKDGVLHRGSGVPDRSMDKNKKAHLQ RKLDSKLTELSSKRKGKPKK NT seq 3123 nt NT seq  +upstreamnt  +downstreamnt atgtcagtagaggcatttgttgacaaaacgcataagttacttgaaaaggaaaggtcatct gaaattgaacagacaaggttgttacatgagaagttaccaccaaaggagctacaaaggaga ggagtatgccttttaaaactgcatattggggagaggaagtctgggatgtttggaagagtg ctggtagtgttggaaactcatctggatgccttaccttcacacactttttctgcaggtgac atagttggcctggatgcctcttcatccgttggtcagtcggacagtcttggctccggcata gtgaccagggtaagcccaacagcggtcactgtggcctttgatgattcagtggacatcttc tcactggaatctggtctccatgactactacaaaatcacaaaactggccaatgatgttaca tacaagcgactgaagaggaccctagaaggtttgagccatggtcgacatgaggtgagccag caactgatatcggtcctgtttggagaccagcctctctcccctcctctcacgttgaaagag cttgtttattccaacacaagccttgatgattctcagcaagaggctgtacagtttgccctc agccagcgggaagtggcagtggtgcacgggcccccaggcacggggaaaaccaccactgtc attgagatcatccttcaggcagtcaaacagggacacaaggtgctggcatgtgccccatcc aacattgcagtggacaacctggtggaccgcctgtcacgtacaaagcaccgtattgtgcga ctgggtcatcccgcccgcctcctgccccacctacaaaagttctctctagatgcaattctg gctcgcagtgatgaggcccagctggtggtagatgtgagaaaggaccttgataaggccctg tctgatctgaagaaaaccagagacagagggcagcgacaaagagctcgcgaggacatgaaa catctccgtaaggagctccgtcagcgtgaaactacagcgaccagggacattctcaagcgt gcagatgttattttggttactctgaccagtgcaactgatgctggacctatgaaactgctg gaggaaagccactttgacctaactgttattgatgaggtatcccaagccctggaggctgcc tgctggatccccttgttgaggtccaggaagtgcgtcctggctggggaccatctacagctt cctcctaccatcctctccaatgaggccgcccaggaaggcttgtcagtgagcctgatggag agagttctagagatgtatggggactctgtgatgaggatgctgacaactcagtaccgcatg caccacatgataatggactggtcctcacaacaactgtaccagtctaaactggtggcccac ccatctgtcagtgaacacctgctaagggatatggatggtgtggaggagaacgagaccaca tcctcccctctcctatttattgacactgcaggatgtgacctgccggagctcgaccttcca gaggaaatatctaagggaaatgaaggggaagctgacatagttaaactacatgttgagaag ctcattgagagtggactgaaacaggaggacattgcagttattgccccttataacctccag gttgagctggtcagacttcgactgggagagaagtaccccggagtggaggtgaaatctgtg gacgggttccaggggagggaaaaagaggccgttgttatctctcttgtcagaagcaaccct aaaggtgaggtgggttttctttccgagaagcgtcgcattaatgtggcggtgacaagagca aggcgccacctggccgtggtcggggacagcatgacagtcagtagcgacccctttcttaaa acactagtggagtatatgaccactgttggggaaacacacagtgctacacagtataataca gatggtgatattaccaggcctgagcacatctctgatctgatctctctaaacaagcaagcc agcaacaagggggcaaaacctaaaacctcaaagaaaatccatgataaaccaagacagaac aagaaaccaagcgagagaaaagaagaaaaccaaaggaaggggagtgtactagaggaggga gatgagagggtgaaggagctacagagtcagctggaggtgtttgttgccaacactggagtc catgtactagagtttgctcccacacttacctcaagggacaggctaattgttcatgagatt gccgagaaaatgggattgtcacacgtcagtcgaggaattggagaagaaaggcacatcgtt gtcggcaggccagatggcgctgccatggaaacagaatcaccctatcagagagccgtccaa gctgaaagtgttgaggagggagggtctgttgataaagatacaagagttgaagtaactgat gttttagaaaaggaggttgtccagacaaagaataagaagagaaagaacaagataaagaac actgattgtgttgaaaagaatatgctaattgatcttgataaagaaaatcaaactaaagta ccatctaatgatgtaattgaaatatgtagtaatagttcaaaatcaagtgaaatagccaga agtgatggaaaagtaagctgttcaatatgccagaaagatgttatcaaagcaaacctaatg atgcatgagctccattgtgcaaagcgtcagattggtgccaagtctgagaatgtgagtggt gcggaaaggcattctaaaaatgccttaaagtcttccagtcatagacagtttgacaaagag ctatcgaacagaatacagaaagtggatgatgatgacattgatgcgttgatagcaacagta cagaagatggactcctcatgttgttttaagaagtgcaaaactagtgtggccaccctgttt caggtgtgttcccactgtgaagggaggtactgcctctcccaccacatccccgaggttcac gggtgtggggatgctgccagagcccaagcacgagcccgcattagcaaggatggagttctt cacaggggcagtggggtcccagatagatccatggataaaaacaagaaggctcatctacaa agaaaactggattcaaaattgactgaactgtcttctaagcgaaaaggaaaaccaaaaaaa tga

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