Mya arenaria (softshell): 128229080
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Entry
128229080 CDS
T09995
Name
(RefSeq) nuclear cap-binding protein subunit 1-like
KO
K12882
nuclear cap-binding protein subunit 1
Organism
maea
Mya arenaria (softshell)
Pathway
maea03013
Nucleocytoplasmic transport
maea03015
mRNA surveillance pathway
maea03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128229080
09122 Translation
03013 Nucleocytoplasmic transport
128229080
03015 mRNA surveillance pathway
128229080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maea03019
]
128229080
03041 Spliceosome [BR:
maea03041
]
128229080
Messenger RNA biogenesis [BR:
maea03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
128229080
Spliceosome [BR:
maea03041
]
Common components
Common spliceosomal components
Cap binding complex
128229080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Motif
Other DBs
NCBI-GeneID:
128229080
NCBI-ProteinID:
XP_052796698
LinkDB
All DBs
Position
3:86702302..86725502
Genome browser
AA seq
791 aa
AA seq
DB search
MASRRRRASFSDDEDDTGRRKRRRTSEHIDIEDRLESLISRVGEKSTSSLESNLEGLASV
LEADLPNYKTKIIRILCECVVKLPEKQAVYTTLVGLLNSKNYNFGGEFVEMLVRQLKESL
KTEQFNAARLIVRFLADLVNCRVIVAGSLLALFDNFVEVTLEDNIPQVRSDWYVYAVLAS
LPWVGRELYEKKELEFQKLLVTIDNYISKRQKIHVPALQVWLSDQPHPQEEYLDCLWAQI
KNVRSNKWLEKQVSRPYMAFDSVLCEALQHTLPQIIPPSHNEEIMYPLPTVIFRMFDYTD
VPEELAIPGSHAIERYLIEEHLSHIINTFHLERKDCAAALLSFTTKNKIPLDYMITEVMF
GHLFRLPTSPYLEIMIGSTLIELCKLQPKSMPQVLAQATEMLYERLDTMKTPCIERFANW
FAYHLSNFQFRWSWEDWSECTQVNPLMPKPKFVSEVLHKCLRLSYHQRIKDSVPESFQDL
VPVKPQANYKYEEEGSAQLPGLMTAHQLLEAIRSKCTPEETLVLLKEVPNPLADDTDEPS
HHPLRIDVFVSTLLHLGSKSFSHSFAAIAKFHYVLKTLAESEEGQICLLKTMYEVWSTHP
QMMVVLTDKLLKTQIVDCSAVANWLFSADMAADFTKNYVWEIMHSTIHKMSKHVEKLQKE
AEEARDLLDAHKKKIADGLDYDDDDDVPTEEMVERMEERLELVQNQQKRLFLIIFQRFII
ILTDHLARCESESMDYQTPWYKWVIERLQEVFLAHHGLVFRYINTLESLLFTSDIDIHIL
EVFQQFCALRS
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaagaagacgacgtgcttcatttagtgacgatgaagatgacacaggtcgtcgt
aagagacgcagaacatcagaacacatagacattgaagatcgattggagtcccttatatcc
cgggtgggagagaagagcacatcatccttggagagcaacttagagggtttggccagtgta
ctggaggcagatcttcccaactacaaaacaaagatcatcaggatcctctgtgaatgtgtg
gtgaagttgccagagaagcaggcagtgtacaccactctggttggccttctcaactccaaa
aactacaacttcggaggagagtttgttgagatgctggtgagacagctgaaagaaagtctg
aaaacagagcagttcaacgctgcaagattgatagtccggttcctggctgacctggtgaac
tgccgagtcattgtagctggctctctccttgccctgtttgacaactttgtggaagtcaca
ctagaggacaacattccacaggtgcggtcagactggtatgtgtatgccgttctcgcatcc
ctgccctgggttggtcgggagttgtatgagaagaaagagctggagtttcagaaactgctg
gtcaccattgacaactacatcagcaagcgacagaagatccatgtgcccgccctgcaggtc
tggttgtccgaccagccccacccccaggaggagtacctggactgcctgtgggcccagatc
aagaatgtccgcagcaacaagtggctagagaagcaggtgtcgaggccgtacatggcattc
gacagtgtgttgtgtgaggccctgcagcacacccttccccagataattcccccttcacac
aacgaggagatcatgtatcctctacccaccgtcatcttcaggatgtttgactacacagat
gttccagaggagcttgctatcccagggagccatgccatcgagcgatacctgatagaggag
cacctgtcacacatcataaacaccttccacctcgagaggaaagactgtgctgcagcgtta
ttaagttttaccacaaagaacaagattcccctcgactacatgattactgaggtgatgttt
ggacacctattccggctgccgacatccccatacctggagatcatgattggctccacactt
atagagctctgtaaactccagcccaagtccatgcctcaagttctggcacaagctacagag
atgctgtatgaacgactggacaccatgaagaccccctgtattgaaaggtttgcaaactgg
tttgcgtaccatctgagcaactttcagttccgttggtcatgggaggactggtctgagtgt
acgcaagtaaacccactaatgccaaagcccaagtttgtctctgaggtcctgcacaagtgt
cttaggttgtcataccaccagcgcatcaaggactctgtgccagaatcattccaggatctt
gtaccagtcaagcctcaggccaactacaaatatgaggaggagggttcagcccagctcccg
ggcctgatgacagcccaccagctgctagaggccatccgctctaaatgcacgccagaggag
acccttgtccttttgaaagaggtgcctaacccactcgctgatgatacagatgaaccatcc
caccaccccctgaggattgatgtgtttgtctctacacttcttcatctgggatctaaaagt
ttctcccactcattcgcagccattgcaaagttccactacgtgttgaagacactggcagag
tccgaggaaggccagatctgtctcctcaagaccatgtatgaagtctggagcacccaccca
cagatgatggttgttctcacagataagctcctgaagactcagattgttgactgttccgct
gtggccaactggctcttctctgcagacatggcagctgacttcaccaagaactatgtatgg
gagatcatgcactccacgatccacaagatgagcaagcatgtggaaaaattacaaaaggag
gctgaggaagccagggacctgcttgatgcccacaagaaaaagatagcagatgggctggat
tatgatgatgatgatgatgtgccgacagaggagatggtggagcggatggaggaacgactt
gagcttgtgcagaaccagcagaaacgactcttccttatcattttccagcggtttatcatc
atcctgactgaccatctggcacggtgtgagagtgagtcaatggactaccagaccccgtgg
tacaagtgggtcatagagaggctgcaggaggtcttcttagcacaccacggtctggtgttc
cggtatatcaacaccctggagagcctactgttcaccagtgatatcgacattcacattctc
gaggtgtttcagcagttctgtgctctcagatcttga
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