Mya arenaria (softshell): 128229227
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Entry
128229227 CDS
T09995
Name
(RefSeq) flap endonuclease GEN homolog 1-like
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maea03400
]
128229227
DNA repair and recombination proteins [BR:
maea03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
128229227
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
Chromo_2
HHH_5
HHH
Motif
Other DBs
NCBI-GeneID:
128229227
NCBI-ProteinID:
XP_052796949
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Position
3:62389339..62406735
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AA seq
601 aa
AA seq
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MGVHGLWDVLEPAGEKDVLVTILKGKIVAVDLGVWIMEASGGRVNKTYDLPTRTIFYRTL
FLLSHGVRLVFVFDGQAPDVKQQTLRKRQQAAGSSSVNCERQIFSKLMTRCEKLGKSLGI
PCIQSPGEGEAMCAFLDKTGLVDGTFTHDSDYFCYGGKTMYRLHSKENKSYKMDVYTSSG
IEAALGLCRDDMVGLALLLGCDYDLQGVPGVGGKKALALCKALKDRGIDFLNRLRSWTTN
SELDDIERKLDQAPERNPHCKRCEHLGKRSTHEKSGCSICRTESSCLESCDRKCPCDWHN
HHSFQQEHKLEISIRSKACNSGSKFPKEEVITEFKSADSLDVDQTQLAPWGMDIAALSVC
MGWNQENVLKNIVPVVILYQLHGICEDWDTMFTPVRIQRACKDNHVECYEVEWDKTDKNT
WAGELYATDVKVKISKQLFSDKFPAMVKHYEQAIADSKKKKSTSGKRKRKMAEDPAQSRS
LAIKDVRRKLEPEFGQVVATDKGGSSGLVRAGSSLEGIFRAQQRSPANQSMTSKSRRKQK
RKDPCVGTNTLHKFFKSSSTQQERETASSRKHARVENNTMTKIKDSRGKKSPTKEVFKMS
N
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgcatggcttgtgggatgttctggagccagcgggagagaaggatgtcttggta
actattctcaagggcaagattgtggcagtcgaccttggtgtctggataatggaagccagt
ggagggcgggtcaacaagacttacgacttgcctacaagaacaatattttatcgcactctg
ttcttgctgagccatggtgtaagattggtgtttgtgtttgatggacaggcaccggatgtt
aaacaacagacactccgcaaacgccagcaggcagctgggtcctcttcagttaactgtgaa
agacagattttctccaagctaatgacacggtgtgagaaactagggaagagtctggggatt
ccatgtattcagagccctggagagggggaggccatgtgtgcattccttgacaagactggg
ttggtagatgggaccttcacccatgacagcgattacttctgctatggtggaaaaacaatg
tacaggcttcatagcaaggaaaacaagtcgtacaagatggatgtgtatacatcaagtggt
atagaggctgccctgggcctgtgtcgggatgacatggttgggctggccctcctgttgggg
tgtgactatgacctgcagggggtaccaggagtaggtggaaaaaaggcactggccctttgt
aaagcacttaaggatcggggaattgactttctgaacagactgaggagctggacaacaaac
agtgagctagatgacatagaaaggaaactcgatcaagcacctgaacgtaatccccactgt
aaaagatgtgaacatttgggtaagagaagcacacatgagaaaagtgggtgttctatatgt
cgcaccgagtctagctgtctggagtcatgtgacaggaagtgtccatgtgactggcacaac
caccacagcttccaacaggaacacaagctggagatctcaatcaggtcaaaggcctgcaac
tctggcagtaaatttcctaaggaggaggttatcaccgagttcaagagtgcagacagtctt
gatgtcgaccaaacccagctggccccatggggtatggatattgcggccctgtcagtgtgc
atgggatggaatcaggagaatgttctaaagaacattgtgcctgttgtgatactgtatcag
ctgcatggaatatgtgaggactgggacaccatgtttacccctgtcagaatacagagggcc
tgtaaagacaaccatgttgaatgttatgaagtggagtgggataaaactgacaagaatacg
tgggctggtgagctatatgccactgatgtgaaggtgaagatcagcaaacagctgttttca
gacaagtttccagctatggtgaaacattatgaacaggcaattgctgacagcaagaagaaa
aaatctacatctggaaaaaggaagaggaagatggctgaggatcctgctcagtccagatcc
cttgccattaaagatgttaggagaaagttggagccagaatttggccaggttgtggccacg
gataaagggggcagctcaggtctagttcgggcggggtccagcctggaaggcatttttaga
gctcaacagaggagcccagcaaatcaaagcatgaccagcaagtcaaggagaaaacagaaa
agaaaggacccttgtgtaggcacgaatactttgcataaattctttaaatcctccagtaca
caacaggagagggaaactgcatccagtaggaaacatgccagagtagagaataacacgatg
acaaagattaaagacagtcgggggaaaaagtccccaaccaaagaagttttcaaaatgtct
aattga
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