Mya arenaria (softshell): 128229377
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Entry
128229377 CDS
T09995
Name
(RefSeq) protocadherin beta-14-like isoform X1
KO
K16498
protocadherin delta 1
Organism
maea
Mya arenaria (softshell)
Pathway
maea03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
128229377
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
maea01009
]
128229377
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
maea04515
]
128229377
Protein phosphatases and associated proteins [BR:
maea01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128229377
Cell adhesion molecules [BR:
maea04515
]
Cadherins
Protocadherins
128229377
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Cadherin_2
Ig_CLSTN
PRIMA1
TMEM154
F59B103_C
Motif
Other DBs
NCBI-GeneID:
128229377
NCBI-ProteinID:
XP_052797222
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All DBs
Position
3:complement(44606940..44630402)
Genome browser
AA seq
1139 aa
AA seq
DB search
MALPRKCEFRAVSCLCWIYFTLFCLALRGSVDAADLTYTVDEEQPRDTLVGDISVDYDLR
SIMTSDEYNNLQYQILSTGNEFAKYFKVENTTGKLLTTEPIDRDSICIRSTSCKLSLNVA
VSTIGAFFRKIVVDVNVQDLNDNSPDFPKAIETVDFSENSAVGMSQSIKGAVDRDAGNNS
VARYYIETPNVPFDVDMESYVDGSSFVKIIVNGNLNREKTDFYSITIVAEDGGSPKRTGS
VDVNINIIDVNDNSPKFDVPFYNVTLLEDTPLNTVFLTVSAVDSDLGDNGRVEYALSPNQ
NSDDIAKSFAVERTSGNISVIGQLEYIPNVQTSIYVDAYDHGAQPRSSKIVVLVNIVDSS
NNPPQINVNILHGDSTKRIARVTEYSNIGSPVAHIGVIDTDYDKDRNGKVDCIAISDYFG
LERYEANDYKAVVKTALDREAQDKHEVQIVCRDNGSPPLNTTTSFSVEVTDENDNYPRFT
HQNYFVKTEENNKVGEIVAKVSATDLDKVNTSNSKIQYKLSAPNDDRFWMDPDTGEIRAN
VVLDRENTSRIDLKVIAQDHGSPRLSATANVSLSITDQNDNYPAFSQPNYEFFVYENLPY
NTSVDQLTASDKDDRENGTIVFSFSKPVPSNFPFTLYSDGNIKVIRPLDRELQSKHEFTV
IAADQGTPPLTSSVTVTVNVLDQNDNVPVFVFPNDDNYTTVIPLANNPDSVTIEIQATDR
DSGDNGKVNYQIIGKNLSDMFEISSIKGMGVISLNRMPYGNEPLSYTLGLKAEDNGTPRQ
SAYSTLTVTFKRAIPPEDNRTNFLIAITLGCVTVVLSIIIVLIIYLIRRNDHSRRKNDTS
YGDKADLQIRPEIKHPTDLASTSSGSKESLKKVSFSTDHNSSIESEPHRDVLQAPLVSLD
NLKIYDKGRVPSSTSSPRSFSPSTSETDGQKLDPATVLQIHRSLLQSHDQMWTNHREGHT
PPLTSDILAQHDDDRSETSGETETYDSGRGGSESDIQTSMSQSHENDHIKTVTFANRPKL
HHFPKDNHWGDSRDYSFMNHPNSFNNQPNTHKPVLPTRDYVSSPLSHPPHHGQSSQLQNM
PKYGNKLSPITDTSSHMTSYDEDDETTTSGSYTIDNDHDWMNDSSQTRPYFLSHNEAYC
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atggctttaccgaggaagtgtgagtttcgtgctgtgtcctgtttatgttggatatatttc
acattattctgcctagctttacgtggaagcgtcgacgccgcggatttgacgtacaccgtc
gacgaggaacagccacgtgacacgctcgttggtgacatttccgtcgactatgacctcaga
tccattatgacgtcagatgagtacaacaacttgcagtatcagattttaagtaccggaaat
gagtttgctaaatatttcaaagtagaaaataccactggtaagctgttgactaccgaacct
attgaccgtgatagcatctgtatacgttcaacgtcgtgcaagttgtcactgaacgtcgcc
gtttcaacgatcggagcgttcttcaggaaaatcgtggttgacgtcaacgtgcaagacttg
aacgataacagcccagattttccaaaggcgatcgagactgtggacttctcagaaaattct
gcagtagggatgtcacagtctatcaaaggggctgttgatagagacgctggaaataattct
gttgctagatattacatagaaacgccaaacgttccctttgacgtcgatatggaaagttac
gttgacggaagctcatttgtgaaaatcattgtgaacgggaacttaaaccgtgaaaaaact
gacttttacagtatcacaatagttgcagaggatggtggaagtcctaagcgtactggaagc
gttgacgtcaatatcaacattatcgacgtcaatgacaactcgccaaaattcgacgtcccc
ttttataacgttacgttattagaggatactccattgaatacagtatttttgaccgtgtca
gctgtcgattcagatctcggagacaatggtagagtagaatatgccctcagcccaaatcag
aatagtgatgatattgctaaaagttttgccgtcgaacgcacgtcgggcaacatcagcgtc
attggccaacttgaatacattcctaacgtgcagacgtcaatttacgtcgacgcgtacgat
cacggggctcaaccacgcagttcgaagatcgttgttcttgtgaacatagtagattccagc
aataacccgccccaaatcaacgtcaatattctgcacggtgactctacaaaacgtattgca
cgtgtaacggaatactctaacatcggatctcccgtcgcacatattggcgttatagataca
gattatgataaagacagaaatgggaaagtggattgtatagctatcagtgattattttgga
cttgagagatatgaagcgaacgactacaaagctgttgtgaaaacagccttggatcgcgaa
gctcaggacaagcatgaagtacagattgtgtgtcgagacaatggttcccctcccctaaac
actactacctccttctccgtagaagtcacagacgaaaatgacaactaccctagatttacg
catcaaaattacttcgtcaagacggaggagaataacaaagttggagaaatcgtcgcgaag
gtttcagcaactgatttggacaaggtcaataccagtaattccaaaatccagtacaagctt
tcagctccgaacgatgatcggttctggatggaccctgacactggcgagattcgagccaat
gttgtgttggatcgcgaaaatacatcccggattgatctcaaagtgatcgcccaagatcac
ggcagcccccgacttagtgcaactgcaaatgtgagtttatcaatcaccgatcagaacgat
aactaccccgcgttctctcagccgaactatgagttctttgtttatgaaaatctcccttac
aatacatcagtggaccaattaacggctagtgacaaagatgacagagagaatgggacaata
gtattttcctttagtaaaccagtgccatccaatttcccattcactctctactctgacgga
aacattaaagtgatcaggcctttagacagagagttacagagtaagcatgagttcacggtg
atagctgcggatcaggggacgccccctttgacaagttctgtaacagttaccgtaaatgtg
ttagatcaaaatgataacgtccctgtttttgtatttccaaacgacgataactatactacc
gtaattccgcttgcgaacaatccggactctgtaacaattgagattcaggcgactgatcgg
gattcaggagataacggcaaagttaattaccaaataattggtaaaaatctatcagacatg
tttgaaatcagtagcattaaaggcatgggtgtgatttcactcaacagaatgccgtatggc
aacgaacctttgtcttacaccttgggattaaaggccgaggacaacggcacaccgaggcaa
tcggcttactcaacgttgacggtgacgttcaaacgcgcaatacctccagaagacaatcgt
acaaactttcttattgccattactttaggctgtgtgactgtagtgttatcaatcattata
gtgttaataatttacctaatccgtcggaatgaccatagccgacggaagaatgacacaagc
tacggcgacaaggcggatctgcagatccgaccggaaataaagcatccgacggacctcgca
agcacgtcgtcgggtagcaaggaaagcttgaagaaggtcagtttctctacggaccataat
tcaagcatcgagtcggaaccgcacagggacgtcctgcaggcgccgcttgtcagcttggac
aatctaaagatttacgacaaagggcgtgttcccagctccacatccagtcctcggagcttt
tcgcccagcacatcagagacagacggacagaagcttgaccccgcaacagtcctgcaaatc
cataggtcactcctccagtcacatgaccaaatgtggaccaatcacagggaaggacacaca
ccacccttaacttcggacattctcgcgcaacacgatgatgaccgaagtgagacttcggga
gagacggaaacttacgacagtggccgaggcggcagcgagtctgatattcaaacgtcgatg
tcacagtctcatgaaaatgatcatataaagacggtaacatttgccaataggccaaaactt
catcattttccaaaggacaaccactggggtgattccagagactattcgttcatgaatcat
ccgaatagttttaacaatcaacctaacactcataaacctgttcttcccacaagagactat
gtatcctcaccattaagtcatcctccacatcatggacaaagttctcagcttcaaaatatg
cccaaatatggcaacaaactttctccaatcaccgatacctcaagccatatgacgtcatat
gatgaagatgacgaaacgactacgtcaggaagttacacgatcgacaatgatcatgattgg
atgaacgactcctcccagacacgcccctacttcctgtctcacaacgaggcttactgttga
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