Mya arenaria (softshell): 128229398
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Entry
128229398 CDS
T09995
Name
(RefSeq) AP-5 complex subunit beta-1-like isoform X1
KO
K19022
AP-5 complex subunit beta-1
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maea03400
]
128229398
DNA repair and recombination proteins [BR:
maea03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
128229398
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
AP5B1_N
FAS_I_H
Motif
Other DBs
NCBI-GeneID:
128229398
NCBI-ProteinID:
XP_052797261
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All DBs
Position
3:9363152..9419603
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AA seq
897 aa
AA seq
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MAKQGNENYPLVLQFRAEIKSGKIVKRFQDEFYALDLLRILYEDTVKNSDKVEILIALEE
YGHLGLTSESVDQVVVSMLGVYQQTGDKGGNSSLACQILTTASSLVIQLDMLKTELCDNV
VKELVAIVTTRVNQPGSENLRACACQSLIHMEEFAPGMLCQYFDEVVRCCRQERSHVFQD
YSLLAATLMENIAMNNYGSKTPVKNPALSNLKWSMSMESHDFKQTVAYLVEQMPMFTRSG
SLRMTLSLANLVLHSPDISPMAFKPLMLHQMATMSCVIFQAVLCIQRKFGSAILTAKEEC
DLVHRLCVMTSQPCLNELHRLLAFHWVRQYKYPETGIHESIIRLHRLLFYPSVFNSVDIQ
LANLYMTALCGDTSNDTEGSETSILLGSLGCLHKLVWHTGSGQAAKALFRALYFIYTRHN
NISFSRDIQRFVRGLISEFAHFIPHSMDFVDSIHSLNVNRYEIFVETLSLLHQQVVMATE
EQIYASYPFYLLIMKKVASQLEIDQSSTIKFLQYLAENAADINDSGWRLGQNILDICRNI
VICHGTQAYYQGLCGLLFTMLSNYNHTDVQDKAKLYYSLVTRAAHSKVRTVLQSSLSDAE
SMSQALSAILPETSEKKSLATIIHLDTSVFTWDRLSVDAKYIFANKHSQTRDSNESECSL
SQYVDRLKQVDACVRLTCRLQMVASSPYQLVHAVSVSIENSTNFKVIPKVHVACLPKDGV
KDIAVQLTPNLPLPQTFQCSVDFFDDSKQTFTCSLPPVGLEFSHMMMPLPWQPTNSDNMD
TFFSLLWDWVLQKEGKERKGIQSVKLFDVSAEDFQHINNSHLKRFAIGSNQEKSCNRYAI
FLPPSHHVLLKCQGQRDDGRSSHTVVVTMVMDITVLLPHVDKFLQAVFNTVNNGSGL
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacaaggaaatgaaaattatccgcttgtacttcaatttcgagctgaaattaaa
agtggaaagattgtcaagcgttttcaagatgaattttatgctcttgacctactaaggatt
ctgtacgaagatacagtcaaaaactctgacaaggtagaaattctaattgccctggaagag
tatggccaccttggactaaccagtgaaagtgttgaccaggtggttgtttctatgctgggt
gtgtatcagcagacaggggacaagggagggaactcttctctggcctgtcagatcctcaca
actgcatccagcctcgtgattcagctggatatgctaaaaacagagctgtgtgacaatgtt
gtgaaggagctggttgccatagtaaccacacgagtgaaccagcccggcagcgagaatctg
cgggcatgcgcttgtcagtcactcatccacatggaagagtttgcaccaggcatgttatgt
cagtactttgatgaggtggtccgctgttgtcggcaggagaggtcacatgtattccaggac
tattccctcctggctgcaacactcatggagaatattgccatgaacaattatggctccaag
acacctgtgaagaatccagctttgtccaatctgaagtggtcgatgtccatggagtcacat
gatttcaaacaaacagtggcctacctggtggaacaaatgcccatgtttactcggtcagga
tctctacgaatgacgttgtctcttgccaacctggtgctgcacagccctgacatatcacct
atggctttcaagccactgatgctacaccagatggccaccatgagctgcgttattttccag
gctgttctctgtatacagcgcaagtttggcagtgcgatattaacagcaaaagaggaatgt
gacctagttcaccgtctgtgtgtgatgacaagccagccatgtctaaatgagctccacaga
ctgctggcctttcactgggtcaggcagtataaatatccggagacgggaatacatgagagt
atcatacgtcttcatcgactgttgttctacccgagcgtgtttaactctgtggacatccag
ctggccaatctctacatgaccgcgttgtgtggggacacatcaaatgatactgaaggttcg
gagacatctatacttcttgggagcctgggctgccttcacaagcttgtttggcacactggc
agtgggcaggcagccaaggccttgttccgggctctatacttcatttatacacgccataac
aatatctccttctccagggatatacagaggtttgttcgaggtctgatctcggagtttgcc
catttcattcctcactccatggacttcgtagacagcatacacagtctcaatgttaacagg
tatgagatatttgtcgagacactaagtttacttcaccagcaagttgtcatggcaacggaa
gaacagatttatgcaagctacccgttttatcttctcataatgaagaaagtggcgtcccag
ctagaaatcgatcaatcgagcacaattaaattcctgcagtatttggcggaaaatgcagca
gacattaacgacagcggttggagactaggacagaacattcttgacatttgccgtaatatc
gtcatctgtcatggaactcaagcgtactatcaaggtctatgtggtttgctgttcaccatg
ctgtccaactataaccacacagatgtccaggacaaggctaaactctactacagtctagta
accagggcagcacatagcaaggtgcggacagtgctacagtcatcactaagtgacgcagaa
tccatgagtcaggcgttatctgcaatactaccagagacaagcgaaaagaagtcattggca
acaattattcaccttgacacctctgtgtttacctgggacagactttctgttgatgcaaag
tatatatttgccaacaaacacagtcaaaccagagacagcaatgagtccgagtgtagcctg
agccagtatgtggacagattgaagcaagtggatgcctgtgtcaggctgacatgtagactg
caaatggtggccagttctccatatcagctggtccatgcagtgtctgtttccatagaaaat
tccacaaactttaaggtcattccaaaggtacatgtggcttgtctgccaaaagatggggtc
aaggacattgcagtacagctgacaccaaaccttcccttgccacagactttccaatgcagt
gtggatttctttgatgactcgaagcagacctttacctgtagccttccaccggttggcttg
gagttcagtcacatgatgatgccgttaccttggcaaccaacaaactccgataacatggat
actttcttctctctgctgtgggactgggtacttcagaaagaaggaaaagaacggaagggc
attcagtcagtaaaactgtttgatgtcagtgctgaagatttccagcatatcaacaacagc
cacctcaaaagatttgccataggatcaaatcaggaaaagtcttgcaacaggtatgccatc
tttttgcctccaagtcaccatgtgttactgaaatgtcaaggtcagagagatgacggtcgc
tctagtcatacagtagtggtcaccatggtgatggacattacagtgttattacctcatgtg
gataagttcttgcaagcagtgtttaacacagttaataacggcagtggactttga
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