Mya arenaria (softshell): 128229409
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Entry
128229409 CDS
T09995
Name
(RefSeq) nuclear factor related to kappa-B-binding protein-like isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
maea
Mya arenaria (softshell)
Pathway
maea03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128229409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
maea03036
]
128229409
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
128229409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
ASXH
Motif
Other DBs
NCBI-GeneID:
128229409
NCBI-ProteinID:
XP_052797280
LinkDB
All DBs
Position
3:58252797..58274074
Genome browser
AA seq
1302 aa
AA seq
DB search
MSGDSRWTSGFATNVGKLERCVLGSTEVQVPECFLEQRHIFNTVMSQETWNKVLTESQRQ
HLMTFLPKFPENDNEEKRDTLRKLFNGENLKFGNPLQNFHRQLKDGSFSPDISKYTEMIR
KMKQKEYREKQKRYYHNMLRDILLSRQRVFDQLTELGPDEPIKFEYDPPKQKNSPIKHRA
QKKYKRYLDEVRQECGLDESSSDDELAGMSQKSKKQLFKTLNPVPSPEPVTPSVHSTYAA
KTEYANGDIDTPVSSLKRPRPISPVDISEEGYREMLTKYKRRQLYDDYDDEDHPEYNTQN
ITLQDVMARCQASRKGGREPSDDDMSFTLSQPKGKVKKERNDKTPRKKMATKIRDMDRDA
SRTGDGDEADDESKNISVDGTEDEASTIDHSSLPPSEDRVDDPVRCSSFFVLIKNIILNS
PDSRISTPKLENRIRSWLDAPMVDDNVWLQARDDWLEMVPLALKFLAGETIGVQVEQFIP
FLDYKERAQQWCWIGYGRDGDETLTVLCEHWLKQREESAEIIVDSSQGSPPPPRWKTGYV
VKATTDEEKTDFQKQEKLRFEEPHRAFMYDMHGYRSVVGPVKGVFTKKSDAAKAREHALL
VNNRPAFVTILTLVRDAVARLPNGEGTRGDICELLKDSQFLAPDITDAQINVVVSGALDR
LHSEKDPCVRYDVNRKVWIYLHRSRSEEEFERLHQAQAAAQKAKKSISRPKSTKSATPKL
RDLTSSQPSATSTPMPPSLGPSMEGVTMDEGAAAPGSTHPVAMPTPQTQVVPRGGAQKAR
QASKVSNVTQSLTPAQLQLLQQAAAAQAALKAQAEAAQTAKATGPGKPRGSPKSDLTSKF
QGQVKVLSQVPSAVTVTKGTVPPNVTLQAPPTLGGPQGVSLGQVFTSIPQMVATTSSTGS
PVTMITSAQPGTNPLVAKLMQQMSAGGQMVSVSSLLAAQRSLQQTGQPRLNTAIKIQGGN
VIQGMSGKSVQLAGKPLAQAKGQLLQIGGGKGQQTLGLIQTPQGTINIIPQAGTTGGLVN
IPQPKGIGAEALKVGSPVTAVPHAGLSLNPGISQGKTVPQVSGGMVVTQLGSGGNYTVKT
TGGQGKVVTTSQAGLLPGHLILQQTPTGLKTFEKQLSMDSTGSYSIVSTPNTSQAAPSSP
SIQMMPTVLSQRAGLKPGQATILISQQALGQGGQVLSPGHILQAARPQGKAPTPGKQPMF
ARLITPQGNIKLASGVQAIQTQGQLIQTVGASGQTFSVPSDSALRQTLSKLVSVGGGGAP
ANVILTTGGTTASTISSSQQILAAAAAGKAALIKEMEKEKKQ
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagatagccgatggacttctgggtttgctacgaatgttggcaaattggagcga
tgtgtgttgggaagcactgaagtacaggttccggaatgcttccttgaacagcgacatatt
ttcaacactgtaatgagtcaagaaacatggaacaaagttttgacagaatctcagaggcag
catttaatgacatttctgccaaagtttcctgaaaatgacaatgaagagaagagagacacg
ttgagaaaattatttaatggtgaaaacctgaaatttggcaacccactccaaaattttcat
aggcaactaaaagatgggtcattttccccggacatatcaaagtacacagaaatgattcgt
aagatgaagcagaaggaatatcgggagaaacagaagcgttactatcacaacatgctgcga
gacatcttactttcaagacagcgtgtgtttgatcagctcacagagcttggaccagatgaa
ccaatcaagtttgagtatgacccacccaaacagaagaacagcccgataaaacatagggct
cagaaaaaatacaaaagatatcttgacgaggtgagacaggaatgtgggctcgatgaatcc
tcctctgatgatgagttagcaggtatgagtcagaagagtaagaagcagctgtttaagacg
ttgaaccctgtcccctcccctgagccagtcaccccaagtgttcattcaacttacgctgcc
aagacagagtacgctaatggagatatagataccccagtgagttcactgaagcgtccacgg
ccgatctccccggtggacatctccgaggaagggtatagggagatgctgacaaaatacaag
cgtaggcagctctatgacgactatgatgatgaggatcacccggagtataacactcagaat
atcacactgcaagacgtgatggctcgatgtcaggccagcagaaaagggggtcgggaaccc
agcgatgatgacatgagcttcacactaagccagcccaaaggcaaggtcaaaaaggagcgc
aatgataaaaccccacgcaagaaaatggccacaaagatccgtgacatggatcgtgacgcc
tcgcggacgggagatggtgacgaggctgatgacgagagtaagaacatcagtgtggatggc
acagaggatgaagccagcaccattgatcactcatccctaccgccctctgaggacagagtt
gatgaccccgtcaggtgttctagcttctttgtgctcatcaaaaacatcatcctcaactct
cctgatagcagaatctcaactccaaagttggagaaccgtatccggtcatggctggatgca
cctatggttgatgacaatgtctggctccaggctcgtgacgactggctagaaatggttccc
ttggctctgaagtttcttgctggggaaactattggtgttcaagttgagcagttcatccca
ttccttgattacaaggagcgggcccagcagtggtgttggatcgggtatggtcgggacggg
gatgagacactaactgtgctgtgtgaacactggctaaaacagagagaggagtctgctgaa
ataatagtagactccagtcagggatcaccacctccacctagatggaaaacaggctatgtg
gtaaaagctaccactgatgaagaaaaaacagattttcaaaaacaggagaagctgcgattt
gaggaaccccacagggctttcatgtacgacatgcatggctataggtcagttgtggggcca
gtgaagggagtgtttacaaagaaaagtgacgctgccaaggctcgtgaacatgccctgttg
gtcaataacaggcctgcatttgtcaccattcttacccttgttcgtgatgcagttgcccga
ctgcctaatggggagggtactcggggagacatctgtgaactgttgaaggactcccagttc
ttagctccagacatcacagatgctcagattaatgtggtggtgagcggggccctggaccgg
ctccactcggagaaagatccctgtgtacgctatgacgtgaacaggaaggtctggatttac
ctacaccgcagtaggtcagaggaggagtttgagagacttcaccaggcccaggcagctgct
cagaaggccaaaaagtccatctccagacccaagtcgaccaaatctgctactcccaaattg
cgtgacctaacgagcagccagcctagtgccacctctactcctatgcccccaagcctgggt
cccagcatggagggcgtgacaatggatgaaggggcagcagcaccgggctctacccatcca
gtagccatgcccacacctcagactcaggtggtacccagaggtggcgcacagaaagctaga
caggcaagcaaggtttccaatgtgacccagtcattaacccctgcccagctacagttgtta
caacaggcagcagctgcccaggccgctctcaaagcccaggctgaggctgcacagacagca
aaggctaccggcccaggaaaacccagaggatcaccaaaatctgacttgacctccaaattt
caaggacaggtcaaggtcctgtcccaggttccctcagctgtcactgttaccaagggaacc
gtgccccctaatgtgaccctccaggcccctcccaccctaggggggccccagggtgtctcg
ttgggtcaggtttttacctcaatccctcagatggttgccacaacatccagcaccggttcc
ccagtaacaatgattacatcggcacagccaggaaccaatccacttgtagccaagctcatg
cagcaaatgtctgctggtggtcaaatggtgtctgtgagcagtctgttggcagcccagcgg
tctcttcaacagactggccaaccacgacttaacactgctatcaaaatacagggaggcaat
gtgatccagggtatgtcagggaaatctgtacaactggcaggaaagcccctagcccaggcc
aaaggtcaactgctccagattgggggtggcaaaggccagcagaccctggggctaatacag
actccccagggtaccatcaacatcatcccccaggccggaaccacagggggcctggtcaac
ataccacaaccaaagggtattggtgctgaagccctgaaggttggttccccagtaactgct
gtgccccatgctggcctttccctgaacccgggcatcagccagggtaaaacagtgccccag
gtttcaggaggcatggtcgtcacccagctgggctcagggggaaactacactgtcaagact
acaggtggacaggggaaagttgtaaccacatcccaggcagggcttctccctgggcatcta
atacttcagcagacacccactggccttaaaacatttgaaaaacaactctcaatggatagc
actggatcatactccattgtgtcaacacctaacaccagtcaagctgctccttcaagccca
agtattcagatgatgccaacagtactatcccagagggcggggctcaagcctgggcaggct
acaatcctcatctcccagcaggccctggggcaggggggccaggtcctctccccagggcac
atcctacaagcagctagaccccagggcaaggcccccacccctggcaaacagcctatgttt
gcccgtctcatcacaccccagggtaacatcaaacttgccagtggagtccaggctattcaa
actcagggccaactgatacaaacagtaggagcctctggccagactttttcagttcctagt
gactcagccttaagacagacactcagtaagctggtttcagtgggtgggggaggtgcacct
gcaaatgtcatccttacaacaggggggacaactgcctccacaatttcctcaagccagcag
attttggctgctgcagctgctgggaaggctgctcttatcaaggagatggaaaaagaaaag
aagcagtga
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