Mya arenaria (softshell): 128230098
Help
Entry
128230098 CDS
T09995
Name
(RefSeq) ubiquitin-protein ligase E3B-like
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
maea
Mya arenaria (softshell)
Pathway
maea04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128230098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
maea04121
]
128230098
Enzymes [BR:
maea01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
128230098
Ubiquitin system [BR:
maea04121
]
Ubiquitin ligases (E3)
HECT type E3
128230098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
128230098
NCBI-ProteinID:
XP_052798070
LinkDB
All DBs
Position
4:complement(11497402..11528475)
Genome browser
AA seq
1063 aa
AA seq
DB search
MFGRVDDHQRSEFLEQTKAQREERAQEKMREKSALTIQCVYRGYKARRKLGDAIRLEIDQ
LMTKPETENGEYRPNFRPGVEVYKLLRGYLFLSPHQPEIQSFEIVCRYLLASMDSDDIKV
SYVSVSLLKEFVLPWIQQVKDILWRCVLVLKQLKPESYVDVRLMMVHLRMLVTFSHTSTW
RILRGKGEHLTAGMTQLCHNIMGHLNNKGLYPVLKGLLFRGLARSKPAFTKTSLTAILTI
SLRPVMAAKFSDNLLSLFVLNILAVPAIVHHIATLAPDCLTLLITNRVFKRSLDLLTNEQ
STRIIFNSLEGNYALCLLANMIHLGYSELEGLVENTTSFMTVTMRLLDKCKHYVQNKRSN
LTHWHPVLGWFSQNTDHGLHEAMPFVVKQLQILWCNKMIRLLFLELIEYVDHARSVELAR
NTGKEKGIIKKALDKASSRNAVSKVRVDSGICVATCLPCVLYQSAITTLSQLRLDIISGL
SYHEILLRYLWRFLSDLGPVCGLKVFLDLLTSAPDSTIHPVFSMLTLFCETAANYICTLD
QIEMFEQQKMFTVDDYIRMSEFLNLFVFRTIWGGLISLSSAVTSELFISAQALLMILYER
DSRHRFTQPNHWLIKDIKPSSFLAELERGKKTAQYIMQKIPHIIPFSERVKIFRRYVQKE
RETLGLCESASATPQSTLITVHRSRIVEDGYRQLAQQPARSMKGLIRVRFINEQGLDEAG
IDQDGVFKEFLEETINRVFDPSLNLFKVTSEQKLFPSSTSYIQENHLHLFEFVGKMLAKA
VYEGIIVEVPFAPFFLTQILGHGTSSTYSSLDELPSLDPDLAKNLSYTKHYDGDISDLDL
TFCYDEDIMGRVETHELVPGGKAIPVTNDNKIRYVHLMAHFRMYRQIREQTLAFIRGFKS
LVNAEWLNMFSSPELQKLMSGDTADMDISDLRKHTQYYGGYHNNHKVINWLWDVLEKDFN
PKDRAAFLKFVTSCSKSPLLGFAHLEPPFSIRCVEVSDDQDTGDTVGSVLKGFFNIRKRE
PVGRLPTSSTCFNLLKLPNYQKKATLREKLKYAIHSNTGFELS
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgtttggacgagttgatgaccatcagaggtcagagttcctagagcaaacgaaagctcag
cgggaagaaagggctcaggaaaagatgcgggaaaagtctgctctaacaatacagtgtgtg
tatagaggctacaaggctagaaggaagctaggggatgccatcaggttagagattgaccaa
ctgatgacaaaaccagagactgaaaatggagaataccgtccaaatttcagaccaggcgtg
gaagtgtacaagctcctgcggggctatctcttcctgtccccacaccaaccagaaattcag
agttttgagattgtttgcagatatcttcttgcctctatggattctgatgatataaaggtc
agttatgtttctgtgtctctgctgaaagaatttgtgttgccatggatacagcaggtcaag
gacattttatggagatgtgtgctggtcctcaaacagctaaagccggagagttatgttgat
gtgcgcttgatgatggtccacctacgcatgcttgtcacattctctcacacctccacttgg
agaatactcaggggcaaaggagagcatctgacagctgggatgactcagctgtgtcacaac
atcatgggacaccttaacaacaaggggctgtatccagtactaaagggtttgctgttccga
ggtctggcgcggagcaagccggcgtttacaaagacctccctcactgccatcctcaccatc
tcactcaggcctgtgatggcagccaaattctcagacaatctgctgtcactgtttgtgcta
aacatccttgctgttccagccatcgtccatcacattgctactcttgctccagattgcctg
accctactgataacaaaccgagtattcaagaggtctctggatttgttgaccaatgagcag
agtactcgtattatcttcaactccctcgaaggaaactatgccttatgtttgctggcgaac
atgattcatcttggttactccgaactcgaaggacttgtagaaaatacaaccagttttatg
acagtgacgatgcgtttgctggacaaatgtaagcactatgtccagaacaagaggtccaac
ctaacccactggcatccggtacttggatggttctcccaaaataccgaccatgggttacat
gaagcaatgccattcgttgtaaagcagctgcagatcctgtggtgtaacaagatgatccgg
ctcctctttctcgagctgattgagtatgtggaccatgctcgatcagtagaacttgccagg
aacactggtaaagagaaagggattataaagaaagccctggacaaggcgtcctcgaggaat
gctgtgtccaaggtgcgtgtggacagcgggatctgtgtagcgacgtgcctgccatgtgtt
ctctaccagtctgctataacaaccctctcacaactcaggctcgacatcatcagtggtctg
agctaccatgagatcctgctgcggtacttgtggcggttcctgagtgaccttggccctgtg
tgtggcctcaaagtgttcctcgacctcctcacttccgccccagactctaccatacaccct
gtattctccatgctaacacttttctgtgagactgcagccaactacatatgcacattggac
cagatagagatgtttgagcagcagaagatgtttacagtggatgattacatccgcatgtca
gagttccttaatctgtttgtcttcaggaccatatggggtggtcttatctcgttaagcagt
gcggtgacgagcgagttgttcatcagtgcgcaagctctccttatgattctttacgagagg
gatagtcgccacagatttacccaacccaaccactggcttattaaggacattaagccaagc
agttttctcgctgaactggaaaggggaaagaagaccgcgcagtatataatgcagaaaatc
ccccatattataccattttcagagcgtgtgaagatattccggaggtatgttcagaaggag
agggagacactaggcctgtgcgagtccgctagcgccacgccccagtcaacgctcatcaca
gtacaccggagcaggatcgtagaggatggttatcggcagttggcccagcagccagcacga
agtatgaagggcctgattcgtgtcaggttcataaatgaacaaggtctcgatgaggctggg
attgaccaggatggggtatttaaggaatttctcgaggaaactatcaacagggtttttgac
ccctcactcaaccttttcaaagttaccagcgagcagaagctgttcccctcctcgacctcc
tacatccaggagaaccacctccacctcttcgaatttgttggcaagatgcttgcaaaggct
gtatatgaggggataatagtggaggttccgtttgcaccgttcttcttgacccagatcctt
gggcatggcacgagctccacgtacagcagccttgatgagctaccctctctcgaccctgac
ttggcaaagaacttgtcctacacaaagcactatgatggtgatatcagtgaccttgacctg
actttttgctatgatgaggacatcatgggccgcgtggaaacgcatgaacttgtacctggg
ggcaaggccatccctgttaccaatgacaacaagattcgctatgttcatctgatggcgcac
tttcgaatgtaccggcagatccgtgaacagaccctggccttcatacgaggcttcaagtcc
cttgtgaatgccgagtggcttaatatgttttcttccccagaactccagaaactcatgtct
ggggatacagcggacatggacatatctgacctcagaaagcacacccagtactatggaggc
taccacaataatcacaaggtgattaactggctctgggatgtattggaaaaagattttaat
cccaaagaccgagcggcctttttaaagtttgtaactagctgctccaagtcacctctgctg
gggtttgcccacctagagcccccattttccatccgctgtgtggaagtcagtgacgatcag
gacaccggggacacagtgggaagtgttctgaagggtttttttaacatacggaaacgtgag
ccggtgggtcggctcccgacctcctccacctgctttaaccttcttaaattacccaactac
cagaagaaagctacactgagagagaaactcaagtatgcgatccactcaaacacaggattt
gaactctcatga
DBGET
integrated database retrieval system
