Mya arenaria (softshell): 128230156
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Entry
128230156 CDS
T09995
Name
(RefSeq) ATP-dependent RNA helicase DDX55-like
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
maea03009
]
128230156
Enzymes [BR:
maea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128230156
Ribosome biogenesis [BR:
maea03009
]
Eukaryotic type
Pre-60S particles
Helicases
128230156
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
ResIII
UPF0227
Motif
Other DBs
NCBI-GeneID:
128230156
NCBI-ProteinID:
XP_052798160
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All DBs
Position
4:76249970..76259169
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AA seq
591 aa
AA seq
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MGDWENIFKFVSQLTINTIEDLGFQKPTPVQDACVPLLMSYKDVAAEAVTGSGKTLAFLV
PVFELLSKSDMVWKRNEVGALIISPTRELAQQIYSVAEIFLKHFPNLSASIFTGGKSTKN
ANVKGEIFGNIVIGTPGRLEALFEQKFEGVELARCVKSLEILVLDEADRLLDMGFEASIN
TILSYIPKQRRTGLFSATQTDEVEKLIRAGLRNPVRVTIKEKSSRQAVSDEMLDIQRTPA
SLKNYFMIVKAEHKLDQLVYFIKSHKKQKILVFLSTCAGVDYFSKILPPLVKVSQIYCIH
GKMKNRKKVIERFRMQGGGVLVCTDVMARGIDIPNINWVIQYDPPTSATAFVHRCGRTAR
NGLTGSAIVFLQPQEQEFVDFIRVNQRVPLHPMEPLPTSNTCIQEVQTMAINDRAVFEKG
MRAFVSFVQSYAKHENYMIFQMKNLDFGSLATGFGLIKFPKMPETKGKDISNFCEVAISV
KDIQYIDKSLEKKRQEQLKSESSRRNNVDMKRKRHQKTESWSGKKDQKDRKRKRREVKEK
KRLQPVVERDNGEDLLSLDEDIRMIKKLKKKKISKEQFDAEFSLDCDELSS
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgggtgattgggaaaacatttttaagtttgtcagtcaattgacaataaatacaatagag
gatttaggttttcagaaaccgacccccgtccaggatgcctgtgttccacttctgatgagt
tataaagacgttgcagcagaagctgttacaggaagtgggaaaactcttgcttttctcgtc
cctgtttttgagctacttagcaaaagtgatatggtttggaaacgaaatgaagttggggca
ttgatcataagtccaaccagagaacttgcacagcaaatttactccgtggcagagattttt
ttgaaacatttccccaatctgtctgcctctatctttactggaggaaaatctaccaaaaat
gccaatgttaagggagaaatatttggtaatattgtgattggcactccagggaggcttgag
gcactttttgaacaaaaatttgaaggtgttgagctggcacgatgtgtcaagtccctcgag
atccttgtccttgatgaggctgaccgcttgcttgacatgggctttgaggcaagcatcaac
accattctcagctatattcccaaacaaagaagaacgggactcttctctgccacacaaact
gatgaggtagagaaacttatcagagctggtttgcgaaatccagtaagagttactatcaag
gagaagtccagcagacaggctgtttcagatgagatgctggatattcaaagaacacctgct
tcactgaagaactattttatgatcgtgaaggcagagcacaaacttgaccagcttgtctac
ttcataaaatctcataaaaaacagaagatattggttttcttgagcacatgtgcaggagtg
gattacttttccaaaatactgcctcctcttgtgaaagtatcacagatctactgcatccat
ggaaagatgaagaacaggaaaaaagtgatagagaggtttaggatgcagggtgggggcgtt
ctggtgtgtacagatgtgatggcccgtggtatagacattcccaacatcaactgggtcata
cagtatgatccacccacatcagctacagcctttgttcataggtgtggtcgtacagcccgt
aacggcctcactgggagtgccatagtcttcctccagccccaggagcaggagtttgtggat
ttcatccgggtgaaccagcgggtgcctcttcaccccatggagcctctgcccacctcgaac
acctgcatacaggaagttcagaccatggccatcaatgacagagcggtgtttgaaaaggga
atgcgagcctttgtcagttttgtccagtcctacgcaaagcatgaaaactacatgattttt
caaatgaagaacttggactttgggagtttggctactggatttgggctcattaagttccca
aaaatgccggaaactaaaggaaaagatatttcaaacttctgtgaggtggcaattagtgtt
aaggacatacagtatatagataaatcgttagaaaagaagagacaagaacagctgaagtct
gaaagcagccgacgtaacaatgttgacatgaaacggaaaaggcaccaaaagacagagtcg
tggtcagggaaaaaagatcagaaagataggaagcgaaagaggagagaggttaaggagaaa
aagagacttcagcccgttgtggagcgggacaatggcgaggatctgttgtctttagatgaa
gatattaggatgatcaagaaattaaaaaagaaaaagatttcaaaagaacagtttgatgca
gaattcagcctagactgtgatgagttatcttcataa
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