Mya arenaria (softshell): 128230489
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Entry
128230489 CDS
T09995
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
maea04131
]
128230489
Membrane trafficking [BR:
maea04131
]
Protein recycling
Others
EARP complex
128230489
Endosome - Golgi transport
Tethering complex
GARP complex
128230489
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
Laminin_II
Sec8_N
MSP1_C
COG3_N
GrpE
Cauli_AT
LXG
COG5_N
ATG16
RecG_N
DUF2009
Motif
Other DBs
NCBI-GeneID:
128230489
NCBI-ProteinID:
XP_052798749
LinkDB
All DBs
Position
4:55021477..55034814
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AA seq
848 aa
AA seq
DB search
MAGLEDDDNFDEEIFQETALLSFPQEVQNVLDEILPSDDPIDSPEFNPVDYINTLFPTEQ
SLSNIDDVVGKIRLKIRRLDDNIRGVVRGQTNVGEDGREALEEAQRAIQDLFSKIKDIKD
KAEKSEEMVKEITRDIKQLDHAKRHLTASITTLNHLHMLVGGVESLTSLSRRRQYGDVAN
LLQGVQNVLEHFQPYMAIPQIRELADRVKQMQAELGTQIITDFEEAFQGSGAKYGPGNQR
QLKEACFVVNILDPKVKRDLLTWFVRLQLSEYLVLFGENQDVAWLDKIDRRYAWIKRTLV
DFEEKFGHLFPVDWEVSERICVEFCDITRKELHKIMGKRRSEIDVKLLLFAIQRTTNFES
LISKRFTGVTIQTAQTKPAASKPAPARNPFEEQTYPEGNNPFAEDAGSAGESDDSKTPTK
ALSSPFIGIISKCFEAHLDIYIESQDRNLADLLTRFLEDFRQYGTPRIESEEGSNVLPSS
ADLFVCYKKCMVQCSQLSTGQPMIDLSRTFQKYLKEYALRILLNNLPKLSAQSSNMTSAT
GLIQSILKEGEVTKLTEEEQCRICSILCTAEYCMETAQQLEEKLKEKVDVELITKIDLNT
EQDIFHNVISNCIGLLVQDLETACEPALTAMCKMSWSSVEAVGDQSGYVTAISGHLKAAL
PLIRDNLASSRKYFTQFCVKFANVFIPKFIGSLYKCKSVTAVAAEQLLLDTHSLKTVLLD
LPSLGSSISRKAPASYTKIVQKGMTKAEMLLKVMMSHHEPAKAFIDNYIRLLNDSDISEF
QKILEMKGLKRSEINTLLELYRAHLPVSMAIGRQVSMERTGSSGTMVTTPEPESSRIRKL
EKLIKKRL
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggccggcttagaagacgatgacaattttgacgaagagatatttcaagaaactgcattg
ctgtcgtttccccaagaagttcaaaatgttttagacgaaattctaccaagtgatgatcca
attgacagccctgagtttaacccggtagattacatcaacactttgttccctacagaacag
tcattgtctaatattgatgatgttgttggaaaaatacgactaaagatacggcgtttggat
gataacattcgaggtgttgtgcggggccagaccaatgttggcgaggatggtagggaggcc
ctggaagaggcacagagggcaatacaagacctcttctccaaaatcaaggacatcaaagac
aaggcagaaaaatctgaagaaatggtaaaagagattactagagacatcaaacagctggac
cacgcaaagcgccacctgactgcttccatcacaaccttaaatcatttacacatgcttgtt
gggggagtggaatcactcacgtcactatcacggcggagacagtatggtgatgtagccaac
ctgctacagggggtgcagaatgtgttggaacattttcagccttacatggccataccccag
atcagggaactggccgacagggtcaaacagatgcaggccgagctcggcacacaaatcatc
accgactttgaagaggcatttcagggatctggtgctaagtatggtcccgggaaccagagg
cagttaaaggaagcatgttttgttgtgaacattctcgacccgaaggtgaaacgagacctg
ctcacctggtttgtcaggctccagttgtcagagtacctggtgctgtttggggaaaaccag
gatgtagcatggctggacaagatagatcgccggtatgcatggatcaagcggacgctggtg
gactttgaggagaagtttggccacctgttccctgtcgactgggaagtcagcgagaggatt
tgtgtagagttctgtgatatcaccaggaaggaattgcacaaaatcatggggaaaagacgt
tcagagattgatgttaaacttctgttgtttgccattcagaggactacaaactttgaaagt
cttatatcaaaaagatttactggagttactattcaaactgcccagacaaagccagcagcc
agtaagccagctccagcaagaaacccctttgaagagcagacgtatcctgaagggaacaac
ccatttgcagaggacgcggggtcagcaggggagtcggatgattcaaagacaccaaccaag
gcattgtcttctccattcattggcatcatatcaaagtgttttgaggctcatctagacatc
tatattgaatcacaggatagaaacctggctgatctgttgacacgcttcttagaggatttc
cgccagtatggaactccgaggatcgagtcggaggagggtagtaatgtgttgccaagcagc
gcggacctgtttgtgtgctacaagaaatgtatggttcagtgctcccagctgagtacaggg
cagccgatgattgacctcagtagaacattccagaaatatctgaaggagtacgctctccgt
atccttctcaataacttgcctaagttgtcagcccagagtagcaacatgacatcagccacc
ggcctgatccagtctatcctcaaggagggtgaggtcaccaagttaacagaggaggaacag
tgtaggatctgcagcatcctgtgtacggcggagtactgcatggagaccgcacaacaactt
gaggagaaactgaaggagaaggttgatgtggaactaataaccaagatagacctcaacact
gagcaagacatcttccacaatgtcatttccaactgtattggcctgctggttcaggacctg
gagactgcttgtgagccggctcttacagccatgtgcaagatgtcctggtcgtcagtggag
gcagtaggggaccagagtggttatgtgacggccatctctggccacttgaaggcagccctg
cctctcatccgggacaaccttgcatcctcgcgcaaatacttcacacaattctgtgtcaag
tttgccaatgtgtttattcccaagttcattggtagcttgtacaagtgcaagtcggtgaca
gctgttgcagctgagcagttacttcttgacacacattccctgaagacagttctactggac
ctgccttccctcggctcatctatatccagaaaggctccagcaagctacactaaaattgtg
cagaaaggaatgacaaaggcagaaatgttgttgaaggtaatgatgtcccatcatgaacca
gctaaagccttcatagataactacatccgactcctcaatgactcagacatcagcgagttc
cagaaaatacttgaaatgaagggcctgaagagaagtgagatcaacactctactggagctt
taccgtgcccacctgccagtctccatggcaataggtcggcaggtgtccatggagaggacg
gggtcatcaggcacaatggtcaccactcccgaaccggaatctagcaggatacgcaaacta
gaaaaactcatcaagaaaagactgtaa
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