Mya arenaria (softshell): 128230549
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Entry
128230549 CDS
T09995
Name
(RefSeq) liprin-alpha-1-like isoform X1
KO
K26226
liprin-alpha
Organism
maea
Mya arenaria (softshell)
Pathway
maea04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128230549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
maea04131
]
128230549
Membrane trafficking [BR:
maea04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
128230549
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
GAS
Bap31_Bap29_C
Motif
Other DBs
NCBI-GeneID:
128230549
NCBI-ProteinID:
XP_052798888
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Position
4:15117071..15170347
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AA seq
1155 aa
AA seq
DB search
MICDVMPTISEDGSTDRESQESGDDANYEQLMVNMLDERDKLMEALRDGQEQQIVMQSRL
EEVEKEKDSLQRQLLTTQPQELASLTKELNCVREALHEREEEVTELKAERNNTRLLLEHL
ECLVSRHERSLRMTVVKRQASSPAGVSSEVEVLKALKSLFEHHKALDEKVRERLRVALER
VTTLEEELVTANQELFTLREQQTKSRHSSGSTEDGRHANKVDTTSPSPGSDHVLEKDHHP
KRLSNGSIDPDSDVNRVIELQETVEKQNSELTNTRTKMLEMNNKLTELDESYTTGQKDLI
KAQEQVVKLQRDLRESIAQKEDQEERIATLEKRYLNAQRESTSLHDFNDKLESELGAKED
EVKALEEKIRGLQERIEVLENKLAATQQQAKALPTVEAQLAQRMEALTEAEQRHGSIEER
IQQLEDKVSEKESELHRARHRDKMNEEHNARLSATVDKLLTESNERLQLHLKEKMQALEE
KNQLTQELERTRKALDDAQQEKERMLEDLQRAKREVDTLRQQIEHLAGDSMFSSQGDGYQ
VQFGSPDESVTRRSQRGRESLDDPDKVNTLNEQEWEKLQQARVIENVQHAFDTSDEGSEG
NESLIGAFDMLSPSGHTDAQTLALMLQEQLDAINNEIRLIQEEKETTEQRAEELESRQPA
SAVPAHLYTYSSSSPQLASTATDERPQQQYSRDDASIKDDSLPIHCESSPPNTPRSLRLE
RIQNALSQSTDSYANRTVINTTSSTLSSTASSQDSLNRSQKKKGLKSSIRTLFGKKEKPK
HKGSMSRDSQQGPGYIDAGGDNTDTLGRGLGPSEFDKRKKRKEELLEEAMKACTPFALWN
GPTVVAWLELWVGMPAWYVAACRANVKSGAIMSALSDQEIQREIGISNPLHRLKLRLAIQ
EMVCLTSPSAPRTSQSQSLAFGDMNHEWIGNEWLPGLGLPQYRSHFMECLVDARMLDHLT
KKDLRGQLKMVDNFHRTSLQYGINSLKRLNYDKKELESRREKSLEENTDVLVWTNERLIK
WAQGIGLRDFANNLLESGLHGALIALDESFDHNSIALAMQIPTQNTNIRSILEREFNNLL
ARGTDRQLEEGEGGRFRRAPSWRKKFRNKDRSKDSGEDGEGSEAGAQGSSPQVQRRMTGP
GLAGQLQMTETMRNF
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgatatgcgacgtgatgccgacgatctcggaggatggctccacagatcgcgagtcgcag
gagtctggggacgatgcaaactacgagcagttgatggtcaacatgctcgacgagcgagac
aagttgatggaggcactacgtgatggccaggagcagcagatcgtgatgcagtcacggctc
gaggaggttgagaaggagaaagacagtctgcaacgacagctgctcacaacacaaccgcag
gagctggcctcgttgacaaaggaacttaactgtgtacgggaagctcttcacgagcgagag
gaggaggtgaccgagctcaaagctgagagaaacaacacacggcttttgctagagcactta
gaatgtctggtatctcgtcacgagcggtctctacgcatgacggtagtgaagcgtcaagcg
tcgtcacctgcgggcgtctcgagtgaggttgaggtcctgaaagctctcaagtccttgttt
gaacatcacaaggccctcgatgagaaggtccgtgagcgtctccgtgtggccctggagcgg
gtgacaacactggaggaggaactggtcactgccaaccaggagttattcacactgcgggag
cagcagaccaagtctcgccactcaagtggatcaactgaggatggacgtcatgcgaacaag
gtggatacgacatccccctccccgggatcagaccatgttctggaaaaagatcaccatcct
aagagattatctaatggttctatagacccagactcagatgtgaacagggtgatagagctt
caggagaccgtggagaagcagaactccgagctgacaaacacccgcacaaagatgcttgag
atgaacaacaagttgacagagctggatgagagctataccactgggcagaaggacttgatc
aaggctcaggagcaggtcgtcaagctgcagagagatcttagagagtccatagcgcaaaag
gaagaccaggaagagagaatagccacgttggagaagcgttacttgaacgctcaacgggaa
tccacctcactacatgactttaacgataaacttgagtccgaactgggcgccaaggaagat
gaagtgaaggctctggaggagaagatccgtggccttcaggagcgtattgaggtcctggaa
aacaaactagcagccacccagcagcaggcaaaggccctgccaacagtggaggcccagctg
gcgcagaggatggaggccctgacagaggcggaacagagacacggctccatcgaggaacgt
atacagcagcttgaggataaggtctctgaaaaggagtcagaattacatagggcacgtcat
cgtgacaagatgaacgaggagcacaacgcgcgtctgtctgcgacggtggacaagctgttg
acagagagtaacgagcggctgcagctccacctcaaggaaaagatgcaggccctcgaggag
aaaaaccagctcactcaggaactagagcggaccaggaaggcactggatgatgcacagcaa
gagaaggagagaatgttagaggaccttcaacgagccaagagagaagttgacacactgcgg
cagcaaattgagcatcttgccggagactcgatgttttccagccaaggggacggctaccag
gtgcagtttggaagtccggatgagagcgtgacgcgcaggtcacagcgtgggcgggagtca
cttgatgacccagataaggtgaacacactgaatgaacaagaatgggagaaactgcagcag
gctcgggtgattgagaatgtccagcacgcgtttgacacgagtgacgaaggctccgagggt
aacgagagcctgataggggccttcgacatgctttccccgtccggacacacggacgcacag
acactcgccctcatgctgcaggaacagcttgatgccataaataatgagataaggttgata
caggaggagaaggagaccacagagcaacgcgcagaggagctggagtcacggcaaccagca
tctgccgttccggcccacttgtacacatactcatcgtcgagtccgcagctcgcatcaacc
gccacagacgagcggccacagcagcagtacagtcgagacgatgcgtcaatcaaggacgat
agcttgccaatccactgtgagtcgagtcccccaaacacgccgcgttctctccgtctagaa
cggatacagaacgccctgtcccaaagtacagacagctatgcgaatcgtacggtgatcaac
acgacctcgagcaccctctcgagcacagcaagcagtcaggactcactgaaccgctcccag
aagaagaaaggcctcaagtcctccatacgtacactcttcggcaagaaggagaagccaaaa
cacaaggggtccatgagcagggactctcagcaaggtccaggttacatagacgctggtgga
gataacacagatactctaggccgaggacttgggccctcagagtttgacaagcgaaagaaa
cgcaaagaggagctactagaggaagccatgaaggcgtgtacaccatttgccctctggaat
ggtccgactgttgtagcatggctagagttgtgggttggcatgccggcatggtatgtggct
gcatgtcgcgcaaacgtgaaatccggagcaatcatgtctgcactatcagaccaggaaatt
cagcgggaaattggaatctcgaaccctctccaccggctcaaactgcgactggcgatccag
gagatggtctgtctcacttcaccgtccgcacccaggacctcacaaagtcaatctctagcg
tttggggacatgaaccatgagtggatcggtaacgagtggttgccgggcctgggcctcccg
cagtaccgcagtcacttcatggagtgcctcgtggacgctcgcatgcttgaccacctcact
aagaaggacctccgcggacagctcaagatggtcgacaacttccatagaacaagtctacaa
tacggaattaatagtttaaagcgattaaattacgataaaaaggaattggaaagtagaaga
gaaaaatcattagaagaaaatacagatgttttagtatggaccaatgaacgcttaatcaaa
tgggcacaaggaataggattacgcgattttgccaacaacctgctagaatcaggccttcac
ggggcgttgatagcccttgacgagagttttgaccacaacagcatcgccctggccatgcag
atacccacacagaacacaaatatccgatcgatactagagcgtgagtttaacaacttgttg
gcacgtggcacagatcgccaactggaggagggagaaggaggcagattccgtcgggcccca
tcatggcgtaagaagttccgcaacaaagatcgcagcaaggacagtggcgaagacggggag
gggtcagaggctggggctcaggggtcttcgccccaggttcagcggcgcatgaccggccct
gggttagccggccagctccagatgactgaaaccatgaggaacttctag
DBGET
integrated database retrieval system