Mya arenaria (softshell): 128230605
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Entry
128230605 CDS
T09995
Name
(RefSeq) protein strawberry notch homolog 1-like isoform X1
KO
K26273
protein strawberry notch
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
maea03036
]
128230605
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128230605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Helicase_C
Utp14
Nop53
CDC45
Motif
Other DBs
NCBI-GeneID:
128230605
NCBI-ProteinID:
XP_052798982
LinkDB
All DBs
Position
4:18496320..18529249
Genome browser
AA seq
1659 aa
AA seq
DB search
MDILSAALDESGITGEEGFDFDFSTPPSVQPSQTVPAQQTFVSTQAPLVNGQGQPVFSNA
LKQLAAQNDIPMPAVTTQFQQFVQQSRIVTVPSNVAPPNSPAANVIQRSASSPSVIRLPN
GQLQQVVPNISAASGLSTNTPAGKKIITVKRVGPNGSITQSRSFTISADAAKGLTGSQKI
IVQKSNGGTQVVRTGSPAPNVIKQTIPGHILQQTRTQVSSPSLLQTFKTEPYVKTEPDVT
YIKTEPAATTSSYENQFMQFTQSRQPNNAKITVKPEPLRVDYQNILKTQPHVMQITKPLS
TTVGGVVTRTLPQTGRLVSSQSVLNAGSPSIRVIQRPFQNSPGPGPPQLQHSISVPTNMS
TYSNISNFPHSLLNERNTDSPPLIISRQPGLGASKMVLNNPSFVNGLPLNEPFGISSLSA
MQQSVHNIASVKMTGKDLSRMWSQQDMRLKTFTTNMNSHHRTAVPGGAGSVVEEEEEGED
VEGLGKAETYNEYMPAKLKLGIKHPDPVVETSSMSSIEPPDIFYRVSIPESTIDYGELSA
LQLESITYASQRHSITLPSGEKAGFLIGDGAGVGKGRTLAGIIFENYLLGRKRAIWLSVS
NDLRVDAERDLRDIGASKIDVHALNKFKYAKISGKENGSVKKGVIFATYSSLIGESHSTG
KYRTRFKQLIKWCGKDFDGVIVFDECHKAKNLCPVGSSKPTKTGQTVLELQKRLPMARVV
YASATGASEPKNMAYMTRLGLWGPGTPFPEFNDFIQAVEKRGVGAMELVAMDMKLRGMYI
ARQLSFKGVTFKIEEIPIDKEFMKMYNEAVQLWQDAREMFQEAADLVGAQHKLRKSMWGQ
FWSAHQRFFKYLCISAKVPHCVRLAREAIRDGKCVVIGLQSTGEARTLEQLEEMGGELND
FVSTAKGVVQTVIEKHFPAPDQRKFFDAFGLGNNVYNNEDSNSSTNGLKRKRESLVGNQA
KKSKGESESDSSSDSEESDFDLGLSDTSDDDDDDDESDDNDNFNPFGNGSDSDEDPWLKK
ANKKAKVKQIKKEKKKKEKKKKEKKEKKKSKNEDEEFTSQLAAAGLLKGGSNSGADGPGN
TAGGDSIEKAFQMKRELLERVELLGDRLPANTLDQLIDDLGGVDNVAEMTGRKGRVVCTD
EGISYESRSENDVPLEILNLTEKQRFMDGEKNIAIISEAASSGISLQADRRVINQRRRVH
ITLELPWSADRAIQQFGRTHRSNQVSAPEYMFLISELAGEQRFASTVAKRLESLGALTHG
DRRATESRDLSRFNFDNKYGKLALESVMKTVCGFESRFVNLPVYELGNFFEDCQQAFVGV
GMITKESRDAIPMLDKDYNNISKFLNRLLGVEVTLQNALFKYFSSTLTTVILEAKKSGRW
DMGIMDLGSGGESVKKLETKVFVGNTATNTAKTELVTVSVERGMSFPSAFDIWKKYTGVN
DGFYISLQDRSIRRFAIVAAYQGSYNKKKEKLFTVYRPNTGLQPKQETLEEIKKKYKKVL
PEEAQRYWEEQYNMSANTCSHAYWRGQCKKISLGLPCEVGLRTRTYYVLSGSVLSVWNKV
ESVLASLPSTMQTKMQIIRLRTDDNQRIVGSLIPSNAVQPLSNVLGQSCSKTYTEKHSGS
AKPTLKEEAAASDNIDAPPSQQHSTPQTPQAVYSMPVFV
NT seq
4980 nt
NT seq
+upstream
nt +downstream
nt
atggatatactatcagcagccctagatgaatcgggtataacaggagaagagggatttgat
tttgacttttccacaccacctagtgtacaaccttcacaaactgtgcccgctcagcaaaca
ttcgtaagcacccaggctcctctcgtaaatggccagggtcagcctgtgttctccaatgcc
ttaaagcagctagcagcacaaaatgacatacccatgcctgcggtgaccacacagttccaa
cagtttgtgcagcaaagcaggatcgtaactgtgccgtccaatgttgctccaccaaactca
cctgcagctaatgtcatccagcggtcagcttcaagcccatcagtgataagacttcctaat
ggacagttacaacaggttgtcccaaacatttcggcagcatcaggcctgtcaacaaacaca
ccagcaggcaaaaagattatcacagtgaaacgagtcggtccaaatggaagcataacccag
agtcggtctttcaccatcagtgccgatgcagctaaaggattaactggctcgcaaaagatt
attgttcagaaatcaaacggtggtactcaggttgttagaacagggtcccctgctccaaat
gtgattaaacaaacaattcctggacatattttgcaacaaacccggacacaagttagtagt
ccgtctttattgcagacatttaagacagagccatatgtgaaaactgagccagatgtgact
tacatcaaaactgagccagcggccacaacaagctcttatgaaaaccagttcatgcagttt
actcagtccaggcaacccaataatgcaaagattacagtaaagcctgaacctcttcgtgtg
gattaccaaaacattttaaaaactcagccccatgttatgcagattacaaaacctctttcg
acaacagtgggcggtgttgtcactcgtactcttccccagacagggagactggtttctagt
cagtctgtgttaaacgcaggcagtccaagcattcgggtgatacagaggccattccaaaat
agtcctgggccgggacctccacagcttcaacacagtatttctgtgccaaccaacatgtca
acatacagtaatatctcaaactttccacatagtttgttgaacgagagaaacacagactct
ccgcctctgataatatcaaggcagccgggacttggtgcaagtaaaatggtgcttaacaat
ccttcgttcgtgaatggattaccactaaatgaaccatttgggatatcctctctgtcagcg
atgcagcaaagtgtacacaatattgcatctgtaaaaatgactggaaaagacttgtctaga
atgtggtcacagcaggatatgagattaaaaacctttacaacaaatatgaactcacatcat
cgaacggcggttccgggcggcgcaggtagtgtggtggaggaggaggaagaaggggaagat
gttgaggggctgggaaaggcagagacatacaatgagtacatgcccgctaaattaaaacta
ggaataaagcatccagaccctgtggtagaaaccagttccatgtcaagtatcgaaccccct
gatattttctaccgagtctcgattccggaaagcacaattgactatggggaattgtcagct
cttcagcttgagtcgatcacgtatgcctcacagagacacagtattacactgcccagtggg
gaaaaggctggtttcctgattggcgatggagcaggtgttggcaaggggcgtacgctggct
ggaatcatctttgaaaattacctattgggaaggaagagagctatatggctgagtgtttcc
aatgatttgagggttgatgctgagagagacctgagggatattggtgcaagcaagatcgat
gttcacgctctcaataagttcaagtatgccaagatctctggtaaggaaaatggcagtgtt
aagaagggggtgatatttgccacctactcgtcactcatcggagaaagccattccacgggg
aagtacagaacaaggttcaaacagctcatcaagtggtgtgggaaagactttgatggtgtg
attgtatttgacgagtgtcacaaagccaagaacctgtgtccagtgggttctagcaaacca
acaaagaccggccagacagtactggaactacagaagagattacccatggcccgcgtggta
tatgctagtgctacaggggcgtccgagcccaagaatatggcgtatatgacccgattggga
ctttgggggcctggcaccccgtttccagagtttaacgacttcattcaggctgtagaaaaa
agaggtgtgggtgccatggagcttgttgccatggacatgaagctgcgtggcatgtacatt
gctaggcaactgagctttaagggcgtcacattcaagatcgaggaaatccccattgacaaa
gagtttatgaagatgtacaacgaggctgtacaattgtggcaggatgcacgggaaatgttt
caagaagctgctgaccttgttggcgcccagcacaagctacgcaagagcatgtggggtcag
ttctggtcagcacaccaacgattcttcaaatatctgtgtatctcagccaaggttccacac
tgtgttcggctggccagggaggcaatacgggatggcaagtgtgtggtgattggcctacag
tccactggggaggctcgtaccctggaacagctggaagagatgggaggagaactcaacgac
tttgtctccactgccaagggtgtggttcagactgtcattgagaaacatttccctgctccg
gatcagcgcaagttctttgatgcctttggtctcggaaacaatgtctacaacaatgaggat
agcaactcttccaccaatggcctgaagagaaaaagagaatctctagttggaaaccaagca
aagaagtctaaaggtgagagcgagtctgattcctcttcagacagcgaggagagcgacttt
gaccttggcctaagtgatacctcagacgacgatgatgatgatgatgaatctgatgataat
gataactttaatccatttgggaatggctcggatagtgatgaggatccttggttaaagaaa
gccaacaagaaagcaaaggtgaagcaaataaagaaagaaaagaagaaaaaggagaaaaag
aaaaaagagaagaaagaaaaaaagaagagtaaaaatgaagatgaggagtttacaagtcag
ttagcggccgcggggctgttgaagggtggcagtaattcgggggctgatgggccaggaaac
acggcaggtggagattcaatagagaaggcattccaaatgaagcgggagttactagagcgt
gtagaactactgggagacagattgccagctaacacactggatcagctcattgacgatctc
ggaggggtggataatgtcgcagagatgacgggcaggaagggacgtgtagtgtgtacggat
gaaggtatcagctacgagtcccgcagtgagaacgacgtaccactagaaatactcaacctc
acagagaaacagagattcatggacggagaaaagaatattgcaattatatccgaggcagct
agctccggtatttccctgcaagcagacagaagagtgatcaaccagcgaagacgtgttcac
atcactctggagctgccctggagtgctgacagggccatccagcagtttggtcgaacccat
cgatccaaccaggtgtcagccccggagtacatgttcctgatatcagaactagcgggagaa
cagaggtttgcctccactgttgcaaaacgccttgagagcctgggagctctgacccatggt
gacaggagagccactgaatcaagagatttaagcagatttaactttgataacaagtatggt
aaacttgctttggagtctgtgatgaagacagtgtgtggatttgagtctcggtttgtgaat
ctgccagtgtatgaacttggaaacttctttgaagattgccagcaggcgtttgttggtgtt
gggatgattacgaaggagagtcgagatgccatccccatgctggataaagattacaataac
ataagcaagttcctgaatcggctactgggagttgaggtgaccttgcagaacgcccttttc
aagtacttctcaagcaccctcaccaccgtcattcttgaggccaaaaaaagtgggcgctgg
gacatgggcatcatggacctgggcagtggtggagaaagcgtgaagaagttggagacgaag
gtgtttgtaggcaatacagcgaccaacactgcaaagacagagcttgttaccgtgagcgtt
gagcgcggtatgtcattcccatcagcatttgacatctggaagaaatacactggtgtcaac
gatggattctacatctccttgcaggatcggtcgatacgtcggtttgccattgtggccgca
taccaaggctcctataacaagaagaaagagaagctgtttactgtctaccggcccaacacc
ggtctacagcctaaacaagaaactctcgaggagattaagaagaaatacaagaaggtgttg
ccagaggaggcccagagatactgggaggagcagtacaacatgtcggccaacacctgcagt
cacgcctactggcgtggtcagtgtaagaagatcagtctgggcttgccttgtgaggtgggt
ctacgtacccgcacctactacgtgctgagtggctccgtgttgagtgtctggaacaaggtg
gagagtgtgctagcctcccttccttcaacaatgcagacaaagatgcagatcatacgactg
cgaactgatgataaccagaggattgttgggagtttgatcccgagcaatgcagttcagcca
ctatcgaacgtgttgggccaatcctgcagtaaaacttacactgaaaagcactccggcagc
gcaaaacctacattgaaagaggaagcggcagcctctgacaatatcgatgccccacctagt
cagcagcattctacaccccaaacacctcaggcggtctacagtatgccggtgtttgtgtga
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integrated database retrieval system
