Mya arenaria (softshell): 128230865
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Entry
128230865 CDS
T09995
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
maea
Mya arenaria (softshell)
Pathway
maea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128230865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maea03019
]
128230865
03110 Chaperones and folding catalysts [BR:
maea03110
]
128230865
03029 Mitochondrial biogenesis [BR:
maea03029
]
128230865
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
maea04147
]
128230865
Enzymes [BR:
maea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
128230865
Messenger RNA biogenesis [BR:
maea03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
128230865
Chaperones and folding catalysts [BR:
maea03110
]
Heat shock proteins
HSP60 / Chaperonin
128230865
Mitochondrial biogenesis [BR:
maea03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
128230865
Exosome [BR:
maea04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128230865
Exosomal proteins of other body fluids (saliva and urine)
128230865
Exosomal proteins of breast cancer cells
128230865
Exosomal proteins of colorectal cancer cells
128230865
Exosomal proteins of bladder cancer cells
128230865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
128230865
NCBI-ProteinID:
XP_052799260
LinkDB
All DBs
Position
1:47120040..47134592
Genome browser
AA seq
572 aa
AA seq
DB search
MYRLAPITRLVATQRMSLVRGYAKDIKFGGEARALMLQGVDILADAVAVTMGPKGRNVIL
EQSWGSPKITKDGVTVAKGIDLKDKFMNIGAKLVQDVANNTNEEAGDGTTSATVLARAIA
KEGFDKISKGANPIEIRKGVMMAVDTVLAELKKMSKPVTTPEEIAQVATISANGDKSIGE
LLSDAMKKVGRDGVITVKDGKTLKDELELIEGMKFDRGYISPYFINSSKGAKVEYQDALV
LLCEKKISSVQTILPALELANQARKPLVIISEDMEGEALSTLVLNRIKVGLQVVSVKAPG
FGDNRKNTLRDMAVATGGVVFGDDADMFKLEDIQMNDFGQVGEVTVTKDDTMMIKGKGDS
ADVEKRIQQIRDEIELSTSEYEKEKMNERLAKLSNGIAVLKIGGTSEVEVNEKKDRVTDA
LNATKAAVEEGIVPGGGCALLRCIPALDGVATTNSDQKTGVDIIRRALRIPAQTIIANTG
IEPSVILEKVIAEPDNMGYDALEGEITDLMKRGIIDPTKVVRTALLDAAGVASLLSTAEC
VVTEMPKEEKEMPMGGGMGGMGGMGGMGGGMF
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtcttgcaccaattacccgtcttgtagccactcaacgcatgtctctcgtgcgt
ggatatgctaaggacattaagtttggaggggaggctagagccttgatgttacagggagtt
gacatacttgcagatgcagtggcggtaacgatgggtccaaagggccgcaatgtgatcctg
gagcaaagctggggaagtcctaagattaccaaagatggcgtcacagtggccaaaggcatc
gacttgaaggacaaattcatgaatattggtgcaaagctagtacaagatgttgccaacaac
actaacgaggaggccggagatgggacaacttcagctactgttcttgcccgcgccatcgcc
aaggagggctttgacaaaatcagcaagggagctaaccccattgagatcagaaaaggtgtt
atgatggctgtagatacagtacttgctgagctgaagaaaatgtccaagccagtaaccaca
cctgaggaaattgcacaggttgccacaatctcggccaatggtgacaaatcaatcggagag
ctcctctctgatgccatgaagaaggttggacgggacggggtcattaccgtcaaggatgga
aaaaccttgaaagatgagttggagctgattgaaggaatgaagtttgatagaggctacatt
tcaccatattttatcaattcttcaaagggagcaaaggttgagtaccaggatgcacttgtt
ctactgtgtgagaagaaaatctcaagcgttcagacaattctccctgctcttgaactggca
aaccaggcccgtaaacctcttgtgattatctcagaggatatggagggggaggcactcagt
acccttgtactcaacaggatcaaagttggtctgcaggttgtatctgttaaagcaccaggc
tttggagataaccgtaaaaacacactacgagacatggcagtcgccactggaggagttgtg
ttcggggatgacgccgacatgtttaaactggaggatatccaaatgaacgacttcggacaa
gtaggggaggtcactgttacgaaagatgacacaatgatgataaagggcaaaggagactca
gcggacgttgaaaagagaatccagcagatcagagatgagattgaactatctacatcagag
tatgaaaaagaaaagatgaatgaacgacttgctaaactctcaaatggcattgctgtcctt
aagattggaggcaccagtgaggttgaagtgaatgagaagaaagatcgtgtgacagacgca
ctgaacgctacaaaggctgctgtggaggagggtatcgttcctgggggtggctgcgctctt
cttaggtgtattcctgctcttgatggggtagctacaacaaactctgaccagaagacaggt
gtggatatcatccgacgtgctctgcgtatcccagcacagaccataatcgctaacaccggc
attgagcctagcgttatactggagaaagttatagccgagccggacaacatgggttacgat
gcactagagggcgagattactgaccttatgaagagaggaatcattgatcccaccaaggtt
gtccgaacagcattgctagacgcagctggagtcgcatctcttctttccacagctgagtgc
gtggttacagaaatgcctaaggaagagaaagagatgccgatgggaggtggaatgggtggt
atgggtggtatggggggaatgggagggggcatgttctga
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