Mya arenaria (softshell): 128230969
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Entry
128230969 CDS
T09995
Name
(RefSeq) acetylcholine receptor subunit alpha-1-A-like
KO
K04807
nicotinic acetylcholine receptor alpha-5
Organism
maea
Mya arenaria (softshell)
Pathway
maea04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128230969
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
maea04040
]
128230969
Ion channels [BR:
maea04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
128230969
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
YfhO
DUF6594
ETRAMP
Motif
Other DBs
NCBI-GeneID:
128230969
NCBI-ProteinID:
XP_052799355
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Position
4:62553334..62555047
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AA seq
456 aa
AA seq
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MYIFNAIDTDFNIPFDQVQQVQDTIDRQGRSQFQTMFLDIMKNYSKNLLPTLGARFQQMK
LNITTQIETLVGIDEVEERFTTVLTFHLAWEDKRLTWDPLLSGVPFMTIDENVVWKPVIE
IGNPHEAKSSRKETENLVYIMSDGRIYWTFVRTIDTRCDIDTTHYPFDRQYCHIDLTTPM
YTLYAVNFTHGIHKRGLNHGNWRYHSHSIYRHQNVESFLWIGTIEYAFDRKPTNPVILYI
APVFILISILPLVFLLPNEGSDRIGLTLTVLLAVSVYMTLVADELPDRSEPMPIITIVLF
IWYVLNTLTTMLVLLNARMYRISEQYTVPACLQCAVLFTRRIFCQGQLKAPVEDEDDSQQ
EAITNEVNDEEKGNAMPGNDNISSAIPGRGDFTSPNVNWKHVSSMVDKILIVSIYTVMAI
FLSILFGVLYHGDKNKKSSMEFGDEYVKYDINAYNV
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtatatcttcaacgcaatagacacggatttcaacattcctttcgaccaggtacagcag
gtccaggacaccattgacagacaaggaagatcccagtttcagacaatgtttctcgacatt
atgaagaactacagcaaaaatcttcttccaaccttaggcgcgcgttttcagcaaatgaaa
ttgaacattaccacccaaattgaaacgttggttggcattgatgaggttgaagaacgattt
acaaccgtgttgacatttcatctagcttgggaagataaacggttgacatgggatcctctt
ttgagcggtgttcctttcatgaccatcgatgagaatgtggtttggaagcccgtgattgag
ataggaaacccacatgaagccaaatcttctcgaaaagaaacagaaaatcttgtatacata
atgagtgatggtcgaatatactggacgtttgtgcgtaccattgacacgagatgcgacata
gatacgacccactacccattcgatcgccagtactgtcacattgacttgacaaccccaatg
tacactctttacgctgtcaactttacccatggcattcacaaacgcggcttaaaccacgga
aactggcgctaccatagtcacagtatttatcgtcatcaaaatgttgaatcattcttgtgg
atcggtacgatagaatacgcctttgacagaaagcccacaaatcccgttattctctacata
gctccagtcttcattttgatttcaattcttccgttggtcttccttcttccaaacgaagga
agtgacagaatagggttgacactgaccgttctacttgcagtgtccgtctatatgactttg
gtggccgatgaactgcctgacaggtctgagccgatgccaattataacaatagtactgttc
atttggtacgtcttaaataccctcacaacaatgctagttttactcaacgcaagaatgtat
cgcatcagtgagcaatacactgttccggcgtgtctacagtgtgctgttctatttactcga
cgaatcttttgtcaaggacaactaaaggctccagttgaagatgaagatgacagtcaacag
gaggcgataacaaatgaagttaatgatgaagaaaaaggtaatgctatgccaggaaatgac
aacatcagcagtgctatccccggtagaggcgactttacttcaccaaatgtgaattggaaa
cacgtgagctccatggtcgacaaaatcctaattgtttcaatctacacagttatggccatc
tttctgagtattctttttggtgttctgtaccatggcgacaagaacaagaaaagcagtatg
gaattcggcgatgaatatgttaaatatgacattaatgcttacaatgtttag
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