Mya arenaria (softshell): 128231137
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Entry
128231137 CDS
T09995
Name
(RefSeq) F-box/WD repeat-containing protein 8-like
KO
K10264
F-box and WD-40 domain protein 8
Organism
maea
Mya arenaria (softshell)
Pathway
maea04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128231137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
maea04121
]
128231137
Ubiquitin system [BR:
maea04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
128231137
Cul7 complex
Target recognizing subunit
128231137
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
F-box-like
WD40
WD40_CDC20-Fz
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
F-box
WDR55
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
DSE1_N
EIF3I
WD40_Gbeta
Beta-prop_NOL10_N
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_1st
Beta-prop_SCAP
BBS2_Mid
WD40_MABP1-WDR62_2nd
Beta-prop_ACSF4
TP_0783
Motif
Other DBs
NCBI-GeneID:
128231137
NCBI-ProteinID:
XP_052799531
LinkDB
All DBs
Position
4:4570598..4580010
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AA seq
680 aa
AA seq
DB search
MNCCNCCYCSSFNWPDIMALEPGKEDLLETFRKTWQQELESEPISKRMKYDKQDDPLAQA
SKESNDHFDLKVSIGSEVCNTRASSAFDSNHDVILKNFKPASESKEHTTVVSTAATAGHS
GEKHIESYSKRRQLKKLSSLKLEEIFVERQSTEVPSERLLDKLISDIDEITEIPFFDISL
PREVAVKIFQFLSVKDLCSCAQVSSSWRSLAEDELLWCQICHRLGQEKIYTTREKSNWKQ
IVQHNVERQLMLVANWKNYNGKLTKLEHMKGGILTCLHSCDDTVVAGYTNGDVKLWRISG
DESCVFQPSSTALLAPTDDTEGTGQTNLVDSVQTAGKVTVAAYTHGNIDIWDMNAGTQPV
YTHLARTGHRYTPSINLAPSGDMLVTGYAHFIDILLREGPDSEFNSMQIDTEFDVHHVKL
YPSTSRDIPSVIYSKQNAIYMHTLNPQGSAYVGSTSELHNIYGASVDRVDFKVDQSLLGV
ALGIGSWAGFDDKLTIKLYDIGSGKLLQTLAGHTWLITALNMHESPAHELVTGSADRKVR
VYDVRERDPVENGYYHSLPVRAVQMDEWKVVSGSEDGFVRVWDRRTRSKLWEYNNRHPIR
YLHFEDKNLIVGNVPSNRYPVDDEGESVTHKRYRGSISIYNFLDDLTNQDIPEVCLSTYD
QPEASRYNISLAVPYDALQF
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgaactgttgcaattgttgttattgttcttcatttaattggcctgacataatggctctt
gaaccagggaaagaagatctacttgagacattcaggaaaacatggcagcaggagctagaa
tcagaacctatttcaaaaagaatgaaatatgacaaacaagatgacccattggctcaagcc
tcaaaggaatcaaatgatcattttgatttaaaagtttctattggttcagaagtatgcaat
actagagcatcaagtgcttttgatagcaaccatgatgtcatattaaagaatttcaaacca
gcctctgaatctaaagaacacacaactgttgtaagtacagctgctacagcaggtcattca
ggagaaaaacatattgaaagctacagtaaaagaagacagttgaaaaaattgtcatccttg
aagctggaggaaatatttgtggagcgacagtcaactgaagttccatcagagagacttctc
gataaacttatttctgatatagatgaaatcacagaaatacctttctttgacataagcctt
ccaagggaggttgctgtaaagatattccaatttctttctgtaaaggatctatgcagttgt
gctcaggttagttctagttggaggagtctggcggaagatgaactcctgtggtgtcagatc
tgtcaccgtctcggtcaggagaagatttacacaacaagggagaagtcgaattggaaacag
attgtgcagcataatgtggagcgacagctcatgctggtggcaaactggaagaactacaat
ggtaagctgaccaagctggagcacatgaagggcggaatcctcacctgtctacattcctgt
gatgacacggtggtggcagggtacaccaatggtgatgtcaagctgtggaggatatcaggt
gatgagagttgtgtgttccagccctcatctacggcccttttggccccaacagatgataca
gaggggacggggcagactaatctggtggatagtgtgcaaacagctggcaaggtcactgtg
gctgcctatacacatggaaatattgacatctgggatatgaatgcaggtacccaacctgta
tacactcatctagctcgaaccgggcaccgatatactccatccattaatctggctcccagt
ggagatatgctggtcactggctatgcacatttcatcgatatacttcttagggagggacca
gactctgaatttaatagtatgcagatagatactgagtttgatgtccaccatgtgaaactg
tatccatcgacaagccgtgatataccatctgtgatttactcaaaacaaaacgccatctac
atgcacacacttaacccccagggttcggcatatgtggggtcaacctcagaactccacaac
atctatggagcatcagtagatagggtagacttcaaagttgaccaatcgttgttgggcgtg
gccttgggaataggctcatgggcaggatttgatgataaactaacaatcaaactgtatgac
atcggctcaggaaagttactacaaacactggctggtcacacatggctgattacagctctc
aacatgcacgaaagtcccgcgcacgagctggtcacagggtcagctgatcgcaaggtgcgt
gtctatgacgtccgtgaacgtgatccggtcgagaatggctactatcattctttacccgtg
cgtgccgtgcagatggacgaatggaaggtcgtgtccgggtcggaggacgggtttgtacgt
gtatgggacaggcggactcgtagtaaactctgggaatataataatagacatcctattcgt
tacttgcattttgaggacaagaacttgattgttgggaatgttccatcaaaccggtaccct
gttgatgatgaaggtgaatcagtcacacataaaagatatcgaggttctataagcatctac
aactttctggacgatctaaccaaccaggatattcctgaagtctgtctatcaacgtacgac
cagccagaggcatccagatacaacatctccctggctgtaccctatgatgccctgcagttt
tag
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