Mya arenaria (softshell): 128231192
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Entry
128231192 CDS
T09995
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
maea
Mya arenaria (softshell)
Pathway
maea03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128231192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
maea03041
]
128231192
Spliceosome [BR:
maea03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
128231192
Complex C
U5 SnRNP specific factors
128231192
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
128231192
NCBI-ProteinID:
XP_052799644
LinkDB
All DBs
Position
4:18220774..18274233
Genome browser
AA seq
2369 aa
AA seq
DB search
MAYNYVIGPGGQPIILGQVPMVPLMQVTGATTQIPQMAPVSAPPQQAPGMSAPVKPPDYM
SEEKLQEKARKWQQLQAKRYSEKRKFGFIDAQKDNMPADHVRKIIRDHGDMTNRKFRHDK
RVYLGALKYMPHAVLKLLENMPMPWEKIRDVKVLYHLSGAISFVNEIPWVVEPVYMAQWG
TMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNILDVEPLESINMDLDPDEDKVVMD
WFYDHQPLVDSKYVNGTTYRRWNLTLPMMSVLYRLGNQLLTDLVDDNYYYLFDLKSFFTA
KALNMAIPGGPKFEPLVKDKEMQDDDWNEFNDINKIIIRQPIRTEYRIAFPYLYNNIPFQ
VHLCWYHWPNIVFIKTEDPDLPAFYFDPLINPISHRLTNKFVDPLPDDDEEFELPEYVAP
FLAETPLYSDNTANGIALLWAPRPFNTRSGRTRRAIDIPLVKNWYREHPPSGMPVKVRVS
YQKLLKYYVLNALKSKPPKSQKKRYLFRSFKATKFFQTTQLDWVEVGLQVCRQGYNMLNL
LIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREVLRLTKLIVDSHVQYRL
GNVDAFQLADGIQYVFSHVGQLTGMYRYKYKLMRQIRMCKDLKHVIYYRFNTGPVGKGPG
CGIWAPGWRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHYDLELR
AAVMHDILDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPIPIENMILRYVKAK
ADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYITPEEG
VAIYTTTVHWLESRRFSPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGL
IEQAYDNPHEALSRIKRHLLTQRAFKETGIEFMDLYSHLIPVYDVEPLEKITDAYLDQYL
WYEADKRRLFPPWIKPADLEPPPTLVYKWCQGINNLQEVWDTAEGECNVMMETRFEKMYE
KIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNAYGIIRGLQFASFITQYFGL
VLDLLVLGLMRASEMSGPPQMPNPFLQFQDVQTEAAHPIRLYSRYVDRIHIYFRFSAEEA
RDLIQRYLTEHPDPNNENIVGYNNKKCWPRDSRMRLMKHDVNLGRAVFWDIKNRLPRSVT
TIEWEGSFVSVYSKDNPNLLFNMCGFECRILPKCRTTHEEFTHRDGVWNLQNEVTKERTA
QCFLRVDDDSMNKFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLD
LLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQT
DVGITHFRSGMSHDEDQLIPNLYRYVMPWESEFIDSQRVWAEYALKRQEANAQNRRLTLE
DLDDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTEFKAYQVLKQNPFWWTHQRHDGKLWN
LNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGL
NQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIH
ESVVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFAAYKWNVSKPSLLA
DSKDVMDNATTQKYWLDIQLRWGDYDSHDIERYTRAKFLDYTTDNMSIYPSPTGVLIGID
LAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQ
NYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSV
WAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKG
SELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVN
NDRTKIILKPDKTTVTEAHHIWPTLSDEEWMKIEVQLKDLILADYGKKNNVNVASLTQSE
IRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITSTTSNYETQT
YASKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFIIISDLRAQISG
YLYGVSPPDNPQVKEIRCIVMPPQWGTHQTVHLPNILPEHEYLKEMEPLGWIHTQPNELP
QLSPQDITTHARIMQDNQHWDGEKTVIITCSFTPGSCSLTAYKLTPSGYDWGRQNTDTGN
NPKGYLPSHYERVQMLLSDRFLGFFMVPSQTSWNYNFMGVRHDPNMKYELMLSNPKEFYH
EVHRPSHFLNFSQMEETELVGADREDLFS
NT seq
7110 nt
NT seq
+upstream
nt +downstream
nt
atggcatacaactatgtcattggtcccggtggccagcccatcatcttggggcaagtgccc
atggtgccgctgatgcaggttacaggagctacaacccagatccctcagatggcaccagtc
tccgcaccaccccagcaagctcctgggatgtcagccccagttaaaccaccagattatatg
tctgaggagaaactgcaggaaaaagcacgcaaatggcaacaactgcaggccaaaagatac
agtgaaaagcggaaatttggctttattgatgcacaaaaggataatatgccagcagatcat
gtgagaaagatcatccgagaccatggtgacatgaccaacagaaagttcagacacgacaag
agagtctatcttggagccctgaagtacatgccgcatgctgttctcaagctactggagaat
atgccaatgccgtgggaaaagattcgagacgtcaaggtcctgtaccatctttccggggcc
atatcgtttgtcaacgagattccatgggttgttgagcccgtctacatggcccagtgggga
actatgtggatcatgatgcgtcgtgagaagagagatcgtcgtcacttcaaacgcatgcgt
ttccccccattcgatgatgaagagccgccacttgactacgcagacaacattcttgacgtt
gagccgctcgagtcaattaatatggaccttgatcctgacgaggataaagtcgtcatggat
tggttctacgaccatcaaccgctcgttgattcaaagtacgtgaatggcaccacataccgg
cgctggaacctgacattaccaatgatgtcggtactctatcgtcttggtaaccagttgttg
acagacctggtcgatgacaactactattatttgtttgatctaaagtcgttcttcacagca
aaggctctcaacatggcgataccgggaggtccaaagtttgagcctcttgtgaaagacaag
gaaatgcaggatgatgattggaatgagttcaatgacatcaacaagatcatcatccgacag
ccgatccgcacagagtaccggattgctttcccgtacctttacaacaacatacccttccag
gttcacctgtgttggtatcactggccgaacatcgtgttcatcaagacagaggatcccgat
ctgcctgccttctactttgatcctctcatcaaccccatatctcacaggcttacaaacaag
tttgtagatccactaccagacgatgacgaggaatttgagcttccagaatatgttgctccg
ttccttgctgagacaccactgtactcagataacactgcgaacggcattgccctgctgtgg
gcacctcgaccgttcaacacacgctccgggcgtacacggcgggcgattgatataccgctg
gtgaagaactggtacagggagcacccgccatctgggatgccagtgaaggtgcgagtgtca
taccagaagctactgaagtactatgtgctcaatgcgctgaaaagcaagcccccgaagtca
cagaagaaaaggtacctgttccgatctttcaaagcgaccaagtttttccagaccacacag
ctggactgggtggaagtaggactccaggtgtgtcgccagggttacaacatgttgaacctg
ctcattcaccggaagaacttgaactaccttcatctggactacaactttaacttgaagccc
gtcaagacgctcaccacaaaggagcgtaagaagtcgagattcggtaacgccttccacttg
tgtcgggaggttttgaggctgacaaaactgattgttgacagtcatgtccagtataggctg
ggcaatgtggatgcattccagctggcagacggtatccagtatgtgttttcccacgttggt
cagctgacgggcatgtatcgttacaagtataagctgatgaggcagatccgaatgtgtaag
gacctgaaacacgtcatctactacaggttcaatactggccctgtaggtaaaggtccaggg
tgtggtatttgggccccaggctggcgtgtttggctgttctttatgagagggatcacccca
ctgctggaacgctggctgggaaacctgctgtctcgacagtttgaggggcgtcactcaaag
ggcgtggctaagactgtgacgaaacagcgcgtggaaagtcactatgatctggaactcagg
gctgctgtgatgcatgacattctggacatgatgccggagggtatcaagcagaacaaggcg
cgcaccatcctacagcatctcagtgaggcatggcgctgctggaaggccaacattccctgg
aaggtaccaggtttgccaatcccgattgagaacatgatcctgcgttatgtgaaggcgaag
gctgactggtggacaaacaccgcccactacaacagggagaggatcaggcgtggtgctaca
gttgacaagaccgtgtgcaagaagaaccttggtcgcctcacacgtctctatctgaaggct
gagcaggagagacagcacaactacctgaaggatgggccgtacatcactcctgaggagggc
gtggccatctataccacaactgtgcattggcttgagagcagaaggttttctccaattcca
ttccccccactgtcatacaagcacgacacgaagctgttgattctggctctggagcgtctg
aaggaggcgtacagtgtaaaatctcgcctgaaccagtcacagcgagaggagttgggcttg
attgaacaggcgtacgacaatccccacgaggccctgtccagaatcaaacgtcatctgttg
acacagagagccttcaaagagactggtattgagttcatggacctgtacagccatctgatt
cccgtgtacgatgtcgaaccactggagaagatcacagacgcttacctggaccagtatctg
tggtacgaggctgacaagcgacgtctcttcccgccatggatcaagcctgctgatctggag
cctccacccacacttgtgtacaagtggtgccaaggcatcaacaacctccaggaggtctgg
gacacagcggagggagagtgtaatgtgatgatggagaccaggttcgagaaaatgtacgag
aaaatcgacttgaccctcctcaacaggctgttgcgtctcattgtcgaccacaacattgcc
gattacatgactgccaagaacaatgtggtcatcaattataaggatatgaaccatacaaat
gcatacggcatcattcgaggtctgcaatttgcctcattcatcacgcaatactttggcctt
gtgttggacctgctagtgctgggcctgatgcgcgcgtcggagatgtccgggcctccacag
atgcccaacccattcctgcagttccaggatgtacagacagaagcagcacatcctatacga
ctctactcgagatatgtggataggatacacatctacttcaggttctccgctgaggaggcg
cgtgacctgatccagcgttacctgacggagcaccctgaccccaacaatgagaacattgtg
ggatataacaacaagaagtgctggccccgtgactcgcgtatgaggctcatgaaacatgat
gtcaatcttgggagggctgtattctgggacatcaagaatcgtctaccgaggtcagttacg
actatcgagtgggagggcagttttgtgtccgtgtacagcaaggataaccccaacctcctc
ttcaacatgtgcgggtttgagtgcagaatcctgcccaaatgtcgcaccacccatgaagag
ttcacacatagggatggcgtctggaacctgcagaatgaggtcacaaaggagcgtacagcc
cagtgtttcctgcgggtggacgacgactccatgaacaagttccacaacagagtgagacag
atcctcatggcctctgggtcaacaacattcacaaagattgtgaacaagtggaacacagcc
cttatcggcctgatgacttatttccgggaggctgtggtgaacacccaggagttactggac
ctgctcgttaagtgcgagaataagatccagactagaattaagattggtctcaactcgaaa
atgcccagcagattccccccggtcgtgttttatactccgaaggaactgggaggtcttggc
atgttgtctatgggtcacgtgctgatcccacagtctgatctccgctggtccaagcagacg
gacgtcggcatcacccattttcggtccggcatgtcacatgacgaggatcagctgattcct
aacttgtatagatatgttatgccatgggagagtgagtttatagactcacagagagtgtgg
gccgaatacgccctcaagagacaagaggccaacgcacaaaacaggcgtctgacacttgaa
gacctagatgacagctgggatcgtggaattcccaggatcaacaccctcttccagaaggac
agacacaccctggcttacgacaagggatggcgagtccgaactgagttcaaggcttaccag
gtgttgaagcagaacccgttctggtggacccaccagcgtcacgacgggaagctgtggaac
ctgaataactaccggacagacatgatccaggctctcggtggagtggagggtatcctggaa
catacactcttcaaggggacatactttcccacatgggagggtctcttctgggaaaaggcc
agcggttttgaggagtcaatgaagtacaagaagttgacaaatgcccagagatctggtctc
aatcagatccccaacagacgtttcacattgtggtggtcaccaaccatcaacagggcaaac
gtgtacgtcggtttccaagtgcagcttgacttgacgggaatcttcatgcacggcaagatc
ccaacgctcaagatttccctaatccagatattccgtgctcacttgtggcagaaaatccat
gagagcgttgtcatggatctttgtcaggtgtttgatcaagagttggacgcccttgagatt
gaaacggtccagaaagagacgattcatcccaggaaatcgtacaagatgaacagctcgtgt
gctgacattctcctgtttgctgcgtataagtggaacgtctccaagccttcactgcttgca
gactcaaaggatgtgatggacaatgcaaccactcagaaatactggctggacattcagctg
cgttggggcgattacgacagccacgatatcgagcgctacactcgagccaagttcctggac
tacacgactgacaacatgagtatctacccatcgcctacaggtgtactgattggcatagat
ctggcttacaatctgcacagtgcatatggcaactggttcccaggctccaaacctctgatc
cagcaagccatggcaaagataatgaaggcaaacccagccttgtacgtactgagagagagg
atcaggaagggtctccagctctactcctcggagcccactgagccctacctgagctcacag
aactacggggagctcttctcgaaccaaatcatctggtttgtggacgacacgaatgtgtac
agagtgaccattcacaagacttttgagggtaacttgacgacgaagcctatcaatggagcc
atcttcatcttcaacccgaggactggacagctcttcctcaaaatcatccacacgtccgta
tgggctggacagaaacgtcttggacagctggcaaagtggaagactgcagaagaagtagct
gctttgattcgatcgctgcccgttgaggaacagccgaaacagatcatcgttacgaggaaa
ggcatgcttgatccactcgaagtccacttgctcgatttcccgaatattgttatcaagggg
agtgaactgcagctgccgttccaagcttgtcttaaggtagagaagtttggagatctgatc
ttgaaggcgacagagccgcagatggtgctgtttaacctgtacgatgactggctcaagacc
atctcttcatacactgcgttctcccgtctgatcctgatcctccgtgccctgcacgtgaac
aacgaccgcaccaagatcatcctgaagccggacaagacgactgtgacagaggcccaccat
atctggcccacactgagtgatgaagagtggatgaagattgaagtgcaactgaaggacctc
atcctcgcggactacggcaaaaagaacaatgtgaacgtagcatccttgacccagtctgag
atccgtgacatcattctcggtatggagatttccgcgccttcagctcagagacaacagatt
gctgagatcgaaaaacagacgaaggaacagtcccagctgacggcaacaacgacacgaaca
gtgaacaaacatggtgacgagataattacgtctaccaccagtaactatgagactcagacc
tacgcgtccaagacggaatggcgtgtaagagcgatttccgcaaccaacctgcatctgcgt
acaaatcatatctacgtttcgtcagacgatatcaaagagactggctacacttacattctg
ccgaagaatgttcttaagaagtttatcatcatttctgatctgcgcgcccagatctctggg
tacttatatggagttagtccccccgataacccacaggtgaaggaaattcggtgtatcgtg
atgcctccacagtggggaacgcaccagacagtccatctaccgaatattctgccagagcac
gaatatcttaaggagatggagccccttggttggattcacacacagcccaatgagctgcct
cagctgtcaccacaggacatcacaactcatgcccgaataatgcaggacaaccagcactgg
gatggggagaagacagtaatcatcacttgcagtttcacgcctggatcctgttctcttacg
gcctataagctaaccccaagtgggtacgactggggtcgccagaacacagacacgggcaac
aaccccaagggctacctgccgtcccactacgagcgagtccagatgctgctgtcggacagg
ttcctgggattcttcatggtgccctctcagacatcttggaactacaacttcatgggtgtg
cgccatgaccccaacatgaagtatgagctgatgttatccaaccccaaggagttctaccac
gaggttcaccgcccctcccacttccttaacttctcacagatggaggaaaccgagctggtc
ggggctgacagggaagatctcttctcctag
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