Mya arenaria (softshell): 128231283
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Entry
128231283 CDS
T09995
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
maea
Mya arenaria (softshell)
Pathway
maea04142
Lysosome
maea04144
Endocytosis
maea05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128231283
04142 Lysosome
128231283
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
128231283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
maea04131
]
128231283
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
maea04147
]
128231283
Membrane trafficking [BR:
maea04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
128231283
Exosome [BR:
maea04147
]
Exosomal proteins
Proteins found in most exosomes
128231283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
capSnatchArena
Motif
Other DBs
NCBI-GeneID:
128231283
NCBI-ProteinID:
XP_052799867
LinkDB
All DBs
Position
4:13137952..13166880
Genome browser
AA seq
1692 aa
AA seq
DB search
MSQMLPIRFQEHLQLQNVGINAANIGFSTLTMESDKFICVREKVGETAQVVIIDMNDSSN
PIRRPISADSAIMNPTSKVIALKGSAQPGDPNAGKTLQIFNIEMKSKMKAHTMTEEVLFW
KWISVNTVAIATETAVFHWPMEGDSQPQKMFERHSNLQGCQIINYRTDPKQQWLLLIGIS
AQQNRVVGAMQLYSVERKVSQPIEGHAAAFASLKVDNNPNPSTIFCFAVRGPQGGKLHII
EVGTPPAGNSPFSKKAVDVFFPPEAQNDFPVAMQVSQKHGVIFLITKYGYVHLYDIENAF
CIYMNRISGDTIFVTAPHDATSGIIGVNRKGQVLSVSVEEDNIVPYITNTLQNPDLAIKI
ASRSNLPGAEELFVKKFNLLFQQGNYSEAAKAAAGAPKGILRTPATIQQFQQVPAQQGQT
SPLLQYFGILLDKGQLNKYESLELCRPVIQQGRKQLIEKWLKEEKLECSEELGDLVKAGD
TTLALSIYLRANVPNKVIQCFAETGQFQKIVLYAKKVGHTPDYIFLLRNIMRMNPEQGLQ
FAQMLVQEDEPLADLNQVVDVFMESNLIQQCTSFLLDALKNNRPAEGPLQTRLLEMNLMS
APQVADAILGNQMFTHYDKAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWL
VNYFGSLSVEDSLECLKAMLTANIRQNLQVCVQIASKYHEQLTTNSLIEVFESFKSFEGL
FYFLGSIVNFSQDQDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQ
LPLIIVCDRFDLVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPIVIGGLLDVDCSEDVIKQ
LILIVKGQFSTDELVAEVENRNRLKLLLPWLEMRSHEGVVEPATHNALAKIYIDSNNNPE
RFLKENQYYDSKVVGKYCEKRDPHLACVAYERGQCDKELIKVCNENSLFKSEARYLVRRR
EPELWVEVLQEDNEYRRQLIDQVVQTALSETQDPEDISVTVKAFMTADLPNELIELLEKI
VLDSSVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAITNELFEEAFAI
FKKFEVNTSAIQVLIEHVNNLDRAYEFAERCNDPAVWSQLGRAQLTGGLVKEAIDSFIKA
DDPTQYMEVVSVASKSDNWEDLVKYLQMARKKARETFIETELVYAFAKTNRLADLEEFVS
GPNHANITQVADRCFDDKMYDAAKLLYNNVSNYARLAITLVHLGEYQGAVDGARKANSTK
TWKEVCFACVNNEEFRLAQMCGLHIVVHADELEELNNYYQDRGYFEELIALLEAALGLER
AHMGMFTELAILYSKYKPEKMREHLELFWSRVNIPKVLRAAEQAHLWPELVFLYDKYEEY
DNAILTMMNHPTEAWRESQFKDIITKVANIELYYRAIQFYLDYKPLLLNDMLMVLTPRLD
HTRSVTFFDRVNQIPLVKPYLRAVQKNNNKAINEALNNLFILEEDFQGLRASIDAYDNFD
NISLAQRLERHELIEFRRIAAYLYKGNNRWKQSVDLCKKDKLFKDAMLYAGESRNIEIAE
DLIAWFLESKYHECFGACLFQCYDLLRPDTILELAWRHNIMDFAMPYMIQVVKEYVTKVD
KLEQSENVRTEEEEKATEQPIVFAEPQLMLTAGPGMGGAPSPGMYAPPPQPGYNPGMPMQ
GQPMPGQYGYGM
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagatgctcccaatacggtttcaggagcacctacagctccaaaatgttgggatc
aacgcagccaacattggcttcagtacactcacgatggagtcggacaagttcatctgtgtg
cgggaaaaggttggggagacggcccaggtcgtcatcatcgacatgaacgactcttctaac
ccaatcagacggccgatctctgccgactctgctatcatgaacccaaccagcaaagtcatt
gcgctgaaaggctctgcccagccaggggaccccaacgctgggaagacactgcagatcttt
aatatcgagatgaagagcaagatgaaggctcacacaatgaccgaggaagttctcttctgg
aaatggatctcggtgaacactgttgccatagcaaccgaaactgctgtattccactggccc
atggaaggtgattcgcagccccagaagatgtttgagcgccactcgaacctacagggctgc
cagatcatcaactatcgtaccgacccaaaacaacagtggctgctgctcattgggatctcg
gcacagcaaaaccgtgtagttggagctatgcagctgtattcagtggagcgtaaagtgagc
cagccaatcgagggccacgccgcagcgttcgcctccctcaaggtggacaataacccaaat
ccctccaccatattctgtttcgccgtccgtgggccacagggcggaaagctacacataatt
gaagtgggcacgccaccagcaggcaacagtccattctctaagaaggccgtagatgttttc
ttcccacctgaagcacagaatgatttccccgtcgccatgcaggtgagccagaagcatggc
gtgatattcctgatcaccaagtatggttatgtgcacctgtacgacattgagaacgcattc
tgcatctacatgaaccgaatcagcggagacaccatcttcgtcaccgccccacacgatgct
acgtctggaattatcggcgttaacaggaagggacaggtgctgtcagtctctgttgaggag
gacaacatagttccctacatcacaaacaccctgcagaaccccgacctcgccatcaaaatt
gcgtctcgatcaaacctccccggagccgaggagctctttgtgaagaagttcaacttgctc
ttccagcagggaaactacagcgaggcagccaaagcagccgctggagcacctaagggcatc
ttgcgtacacccgcaaccatccaacagttccagcaggtgcccgcccagcaaggccagaca
tcgcctctcctgcagtacttcggtatcctgctggacaagggacagctcaacaagtatgaa
tccctggagttgtgcagaccagtcatccagcagggacgcaaacagctcattgagaagtgg
ctgaaggaagaaaagctggagtgcagtgaggagcttggagacctcgtgaaggcaggggac
acgactctagccctctccatctacctgcgagccaacgtgccgaacaaggtgatccaatgc
ttcgcagagactggacagttccagaagatcgtgctgtatgcaaagaaggtcggccacaca
ccagactacatcttcctactgaggaatatcatgaggatgaaccccgagcaaggcctccag
tttgcacagatgttggttcaggaggatgaaccactggctgaccttaaccaggttgtggat
gtgttcatggagtccaacctgattcagcagtgcacatcattccttctggatgccctgaag
aacaaccgcccagctgagggccccctccagactcgcctgctggaaatgaacctgatgtct
gcaccacaggtagctgacgcgatcctgggtaaccagatgttcacccactacgacaaggcc
cacatcgcccagctgtgcgagaaggccgggctcctacagcgtgctctagaacactacact
gacctgtacgacatcaagcgggctgtcgtccatacacacctactcaaccctgagtggttg
gtgaactactttggctccctctctgtcgaggattccctggagtgtctgaaggctatgttg
actgccaacatccgccagaaccttcaggtgtgtgtccagatcgcctccaagtaccatgag
cagctcaccactaactccctcattgaggtgttcgagtcattcaagagctttgaaggattg
ttttacttcctgggttccattgtgaacttcagccaggaccaggacgtccacttcaagtac
atccaggctgcttgcaagaccggacagatcaaggaggtggagaggatctgccgagagagc
aactgttacgaccctgagagggtgaaaaacttcctaaaggaagccaagttgactgaccag
ctgccgttgatcatcgtatgtgacaggtttgacctcgtccatgaccttgtcctctacctg
tacagaaacagtctccagaagtacattgagatctacgtgcagaaggtgaacccatctcgt
ctgccgatcgtgataggaggactgctagatgttgactgctccgaggatgtaattaaacag
ctcatcctgattgtaaagggccagttctccacagatgagcttgtcgctgaggtcgagaac
cgtaaccgcctcaagctgctactgccctggcttgagatgcgctctcacgagggtgtggtt
gagcctgccacacataatgcacttgccaagatttacatcgacagcaacaacaatcctgag
agattcctaaaggagaatcaatactatgacagcaaggtggtgggcaagtactgtgagaag
cgagacccacatctcgcttgtgttgcctacgagaggggccagtgtgacaaggaactcatc
aaggtctgcaatgagaactcgctgttcaagagtgaggcacgctacttggtgcgtcgtcgg
gaaccagagctctgggttgaagtcttgcaggaggataatgagtatcgccgacagctcatc
gaccaggttgtgcagacagcgttgtcagagacccaggacccggaggacatctctgtgaca
gtgaaggcattcatgaccgctgacctgccaaacgaactcattgagctgctagaaaagatt
gttctggacagttcagtcttcagtgaacacaggaacctgcagaacctgttgatcctgaca
gcgatcaaggctgacaggacccgcgtgatggagtacattaataggcttgacaactacgac
gcccccgacattgccaatattgctatcactaatgagctgtttgaggaggcattcgccatc
ttcaagaaatttgaagttaacacatcagccattcaggttcttattgagcatgtgaacaac
ctggaccgcgcgtacgagtttgcggagaggtgtaatgaccctgccgtgtggagtcagctc
ggtcgtgcccagctgactggtggtctcgtcaaggaggcaatagactcgttcatcaaggcc
gatgatccaacacagtatatggaggtggtcagcgtcgccagcaagagtgacaactgggaa
gacttagtgaagtacctacagatggccaggaagaaggcacgtgagaccttcattgagaca
gagctggtgtacgccttcgccaagaccaaccgcctcgccgacctggaagagttcgtctct
ggaccaaaccacgccaacatcacacaggttgccgaccgctgctttgatgacaagatgtat
gacgctgccaagctcctgtacaacaacgtgtccaactacgctcgactggcgatcacgctt
gtacaccttggagaataccagggggctgtggacggggctcgtaaggccaacagcaccaag
acatggaaagaggtgtgttttgcatgtgtgaacaatgaagagttccggctggcgcagatg
tgtgggcttcacattgtggtgcacgcagatgaactagaggagctgaacaactattaccag
gaccgtggatactttgaggaactcatcgctcttcttgaggcagcattagggttggagagg
gctcacatgggcatgttcacagaactagcaatactgtactccaaatacaaacccgagaag
atgcgagaacatttagagttattctggtcaagagtcaacattccaaaagttttgcgtgct
gcagagcaggcccacctatggcccgagcttgtgttcctttatgacaagtatgaggaatac
gacaatgcgatcctcaccatgatgaaccatccaacagaggcctggcgcgagtcacagttc
aaggacattatcaccaaggtggccaacattgagctctactacagggcgatccaattctac
cttgattacaagccgctgctcctgaacgacatgctgatggttctgactccccgtctggac
cacacccgctccgtcacattcttcgaccgcgttaaccagattccactagtgaaaccgtac
cttcgggctgtgcaaaagaataacaacaaagctattaacgaggctcttaataatctgttc
attttagaggaagatttccagggtcttcgggcctctatagatgcatatgataattttgat
aatatatctctggctcagagattagaacgccatgaactgatagagttccgtagaatagct
gcttacctttataaaggtaacaacagatggaaacagtcggtggatctatgcaaaaaggat
aaactatttaaggatgcaatgctgtacgcaggagagtcaagaaatattgagatcgcggag
gacctgatcgcttggttcctggagagcaagtaccacgaatgcttcggcgcatgtctgttc
cagtgttacgacctgctgcgtccagacacaatcctggagctcgcctggagacacaacatc
atggactttgccatgccctatatgattcaagtcgtcaaggaatatgtcaccaaggttgac
aagcttgagcagtcggagaatgtgaggacagaagaggaggagaaagccactgaacaacct
attgtctttgctgagccccagctgatgttgacagcaggcccagggatgggaggagctccc
agtccaggcatgtatgccccaccaccccagcccggatacaatcccggaatgcccatgcaa
ggccagccgatgcccggccaatatggatatggcatgtaa
DBGET
integrated database retrieval system
