Mya arenaria (softshell): 128231292
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Entry
128231292 CDS
T09995
Name
(RefSeq) nuclear pore complex protein Nup50-like isoform X1
KO
K14295
nuclear pore complex protein Nup50
Organism
maea
Mya arenaria (softshell)
Pathway
maea03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128231292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maea03019
]
128231292
Messenger RNA biogenesis [BR:
maea03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128231292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
EVH1_PP4R3
Motif
Other DBs
NCBI-GeneID:
128231292
NCBI-ProteinID:
XP_052799881
LinkDB
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Position
4:9036328..9043642
Genome browser
AA seq
428 aa
AA seq
DB search
MSERRLKSPDVSVSERKISTLNFTQEILIDERMAKRGASSELTDRNWDQEDEPEEAGTFE
KATEDALKGRQIIKAKRRTADEASGGKSAFSGFGGFAFKPTQTSTPLFSGGMFKTESKIS
EAEKQKDKLGTVHETTESAEEKSANGNHNRASDSPNRTAYLSNLKSLNMSVLNWIQTHLD
KNPYCILTPIFKDYDTHLKQLEQDREKSESNGSSSKVLKKEESVKPMEAEKTEMPKTGLT
FGMGTLQANSSTFSGAGFPAFSFKPTSQPLGTASGSGFSFAVGSQQNASGSKDDGAKGDD
EDGYVPPVVETVEHKEEGSLYSKKCKLFYQKDGEWKDRGVGFLHLKKTDGKAQLLVRADT
TLGNILLNIRLVDTTPMSRQGKNNVNLMCVVSPPIPKMPEDKPIPMLIRVKTGDDADELL
HKMKEISS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagcgccggttaaaatccccggatgtcagtgtgtctgagagaaaaatcagcact
ttaaactttactcaagaaattcttattgatgaaaggatggcaaagaggggagctagttct
gaattgactgaccgtaactgggatcaggaagatgaaccagaagaagcaggtacatttgag
aaagcaactgaagatgccttgaaagggagacaaatcatcaaagcaaagaggcggactgct
gatgaggctagtggtggaaagtcagccttttctggctttgggggatttgccttcaaaccc
acacaaactagcacaccattattttctgggggaatgttcaaaacagagtcaaaaatctct
gaagctgagaagcagaaggacaaactaggaactgtccatgagactacagaaagcgcagaa
gaaaagtcagcaaatggaaatcacaacagagctagtgactcaccaaatcgaacagcttat
ttgtcaaatcttaaatcattaaatatgagtgtattgaactggatacaaacacatttggat
aagaatccttattgtatacttacacctatatttaaagactatgatacacatttaaaacag
ttggaacaagacagagaaaagtctgaatccaatggatccagcagcaaagttttgaaaaag
gaggagtccgtgaagcccatggaagcagaaaagacggaaatgcccaagacggggctcaca
tttggtatgggcacactccaagcgaatagttccaccttttctggagcaggcttccccgca
tttagcttcaaacccacaagccagcccctggggactgcctctgggtcagggttcagtttt
gctgtggggtcgcagcaaaatgcatcagggagtaaggatgacggagcaaagggggatgat
gaggacgggtatgtgccgcccgtggtggaaacagttgagcacaaggaggagggctcactg
tacagcaagaagtgtaagttgttctaccagaaagacggggaatggaaggaccgaggcgtg
ggcttcctgcatctcaagaagaccgatgggaaggcacagctgctggtccgagcagatacc
actcttggaaacattctactgaacattcgtctagtggacacaaccccgatgtctagacaa
ggcaagaacaacgtcaatctcatgtgtgttgtcagcccgcccatcccgaaaatgccagag
gacaaacctatccccatgttaatccgagtgaagactggagacgatgctgatgaactactg
cataaaatgaaggagatcagttcatga
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