Mya arenaria (softshell): 128231342
Help
Entry
128231342 CDS
T09995
Name
(RefSeq) leucine-rich repeat protein soc-2 homolog
KO
K19613
leucine-rich repeat protein SHOC2
Organism
maea
Mya arenaria (softshell)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_13
LRR_LRWD1
LRR_9
LRR_5
Motif
Other DBs
NCBI-GeneID:
128231342
NCBI-ProteinID:
XP_052799984
LinkDB
All DBs
Position
4:60616518..60649554
Genome browser
AA seq
608 aa
AA seq
DB search
MSISKKGTKGKGNDAVASRLADFTGEKEIPIAGQPKMSSLEQDDANSGPEFDPSVEALSN
SIESAGIRDGKEKKSSTGNSVPSQQQPQQKSVCLQEPGQLKPKPSSSKKPVKADLDVGKV
FKKCKEDQSTRLDLSKSQITVIPPTIKELVHLKELYLYGNKIVQLPNEIGCLVNLETFAL
NENSLTYLPETMANLDKLRLLDLRHNRLTEIPEVVYQLKSLTTLLIRFNRIKTVGDGIRN
LTNLTMFTLRENKIRELPKGIGCLVNLSTFDVSHNHLEHLPQEIGDCVLLSSLDLQHNEL
LDIPETLGNLKSLTRLGLRYNRLMCVPASLANCTLMDEFNIEGNNVSVLPEGLLSSLTSL
KAFTVPRNKFHAYPTGGPSQFVSVESINMEHNQINKIPYGIFSQAKCLSKLNMKDNQLTS
LPLDIGQWTNMVELNLGTNQLTRIPDDIQNLEKLEVLILSNNLLKRLPASIGNLKKLQVL
DLEENKLESLPQEVGQLRELRRLIVQTNQLTSLPRAIGCLSNLQYLGAGENHLSSIPTEI
GALESLESLYINDNAELHSLPYELALCYNLQIMSIENCPLSKLPPEIVARGPSLVIQFLK
MNGQYCQM
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgtccatatctaaaaaaggaactaaagggaaaggaaatgatgctgtagcttcaagactt
gctgattttactggtgaaaaagaaattcctattgctggacaacccaaaatgtcgtcattg
gaacaagacgatgctaattctggaccagaatttgacccgagtgtagaggcattatcaaat
tctatagaatctgctggaatcagagatggaaaggaaaagaagagcagtacaggtaattct
gtcccaagtcaacaacaaccccaacagaaatcggtgtgtctgcaggagcctggacaactg
aaacctaaacccagcagcagcaaaaaacctgttaaggctgacttagacgttggcaaagta
ttcaagaaatgcaaagaagaccagtcaacacgacttgaccttagtaaatcacagattact
gtgattccaccaacaattaaagagttggtacacctgaaagagctgtatctctatggaaac
aagattgtacagctgcccaatgagattggttgcctggtgaacctggagacgttcgcattg
aatgaaaactccttgacatacctgcccgagacgatggcaaaccttgacaagttacgactg
ctcgacctccgacacaataggctaacagagatacccgaagttgtctaccagttgaagtct
ctcaccaccttgttaatacgattcaacaggattaagactgtaggagatgggattaggaat
ttaacaaatttgacaatgttcactcttcgagagaacaagatacgcgaactgccgaagggc
atcggatgtctggtcaacctgagcacgtttgatgtgtcccacaaccaccttgaacacttg
ccacaagagattggtgactgtgtattgctgagctcactggacctccagcacaatgagctg
ctcgacatcccagaaacgcttggcaaccttaaatcccttactaggcttggcctcagatat
aatcgtctgatgtgtgttcctgcctccctggccaactgtacactcatggatgagttcaat
atagaaggaaacaatgtttcagtactgccggagggtttgttgtctagtctgacaagtttg
aaggctttcactgtacctcgaaataagttccacgcctacccgacgggcggaccttcacag
tttgtctctgttgagtcgatcaacatggagcacaatcagatcaacaagattccgtacggg
attttctcccaggccaaatgtctttccaagctgaacatgaaggacaaccagctcacatct
ctacctcttgatattggacagtggacaaacatggttgagctgaacctgggtaccaatcag
ctcactcgcattcctgacgacatccagaaccttgagaaactcgaagtcctcatccttagt
aataacttgttaaagagacttccagcttcaataggaaacttaaaaaagctgcaagtttta
gatttagaagaaaataaattagaatccctcccacaagaagtaggccaattgcgagagtta
aggagattaatagtacagacaaatcaactgacctcattaccaagagcaattgggtgttta
agtaacttacaatacttaggtgctggggaaaaccacctctcttccatacccacagaaata
ggtgctctagaaagtttagaatccttgtacataaatgacaatgcagaactccactccttg
ccgtatgagctagctctctgctataatctgcaaattatgagcattgagaactgcccgctt
agtaaacttcctcctgaaatagttgcaaggggcccctcattagttatacaatttttgaaa
atgaacggacagtattgccaaatgtga
DBGET
integrated database retrieval system
