Mya arenaria (softshell): 128231394
Help
Entry
128231394 CDS
T09995
Name
(RefSeq) transcription intermediary factor 1-alpha-like isoform X1
Organism
maea
Mya arenaria (softshell)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-RING_5
zf-B_box_Trim66
zf-C3HC4
zf-C3HC4_2
zf-RING_2
Tp0577_N
Motif
Other DBs
NCBI-GeneID:
128231394
NCBI-ProteinID:
XP_052800129
LinkDB
All DBs
Position
4:complement(7014397..7044091)
Genome browser
AA seq
1158 aa
AA seq
DB search
MAEEFLNDLQNALEETSCTPALTCGKCKDEFSWEKPAKLLPCLHSFCEPCLKQNDQQPNL
LEEKKDENTEEEKSEAPTEKNDMQPGTSESSSLSFLVGDELTEKDANEPCQTETERPLIL
ENNIEPKDLQEGQPGEVSSSSTFDGTDGKSSFDGKSAFDDGKSTVDDGNSTFDGKLRCPE
CQLEYTEDKILQNPFVSVVKKFEPKIEDGAPTEDKKDICTSCDENEVATSFCVQCEEWLC
DPCVGAHKRVKLTKDHTVTIRSEMNDVKEKMVIDTKPKQMYCEVHQLETLKLFCLTCEKL
TCRDCQLEDHKDHNYQYIEKTVDGQKKILIDGIDNLKEKLQKHQEMAEQILSKEKDIKRQ
QVEVFNEVRRVADLITNELISWCKKLLNFLQGVCHGRIKDLTFKKKEIDTYGTKAKHIIE
FVESALSSGDDLALLYTKSIMSKNISQLNDQEINFSKTLLDLNIQYENDAVFLTKNVSKM
GFINVNGKSYPHQEESKTAQSLASRELVKAKIPSLPQPVSTEGQTVTNPVQSMTNAELLN
TISKDNFQQHIIELLSREPLATREKYRALPPEKKRQFLENLLQSHKQLHLQQQQQQQQPA
PSNQPVQQQQQQGFNPLGVSGPPQRQQAFSSDSGALQELYRQTQRMPAPPQAGFMNQNPF
QRQQQIQQQQLQQQQLRQQQQQQQLARQRMMMQQQIRQQQLNQNTNAPFLTSPFGQPQSN
SNFQSWRGAPASMPMNTNSKVIPANQLPSTGKYDFIDPLNLRGGSGEPTRVKQEPRDNPS
CQFSGKATQQSPQPSNHGQPQAPAVLSPTSAFPSSTLQFPALSPSLGLIDRGNRSDINTL
MMSPVFQAVPSSTSSSPSSTLRSPAHTPSPGHIDGGHMGNRSTASPAVLPDINIMDSDRS
MAMTGLMHPNGHIISPYNLMPRHDPNDPSEDYCGVCHNGGDLLCCDRCPKVFHLNCHCPV
ISSNLSPSETWTCTMCTPDEELIIREPIPREFELTSTGKRKAPNGLVDREIRVCERILLE
LFCKEVSTVFHEPVSKSIPNYYKIITHPMDFGTIKCKLRRGHFAHYNSIEEYIRDVKLVF
RNCMKFNDPISDVYGIGIQMNSFFETLVAHFLPCYLHCLTRSVSPDQMSDPGMDGPSRIK
KRRSPAPDSTRDSSTPPI
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagagtttttaaatgacctccagaatgcactggaagaaacgtcatgtacacca
gctttaacctgtggaaagtgcaaggacgaattttcctgggaaaagcctgcaaaattactt
ccttgcttacattcattctgcgaaccgtgtttgaaacagaacgatcagcagccaaactta
ctcgaagagaaaaaagatgagaatacagaagaagagaaaagtgaggcaccaacggagaaa
aatgacatgcaacctggcacctccgaaagttcctctttgtcctttttagtcggtgatgaa
ttaaccgagaaagatgcaaatgaaccatgtcaaactgaaactgaaaggccactaatcctg
gaaaacaatattgagccaaaagatttacaagagggtcaacctggagaagtatcctcctcg
agcacatttgatggcactgatgggaagagttcatttgatgggaagagtgcatttgatgat
ggcaagagtacagttgatgatggaaatagtacttttgatggaaagttgcgctgtccagaa
tgtcaactggaatacacagaggataagattttacagaacccatttgtgtccgtagttaaa
aaatttgaacctaaaattgaagatggtgccccgactgaggacaaaaaggacatctgcacg
tcttgtgatgaaaacgaagtggccacgtcattctgtgtgcaatgtgaggaatggttatgt
gacccttgtgtaggtgcccataaacgggtgaaacttacgaaagaccatactgtaaccatc
cggtctgaaatgaatgatgtgaaagaaaaaatggtcattgatacaaagcctaaacaaatg
tattgcgaggttcatcagctggaaacgttaaaactgttttgtttgacttgcgaaaaattg
acatgcagagactgtcagcttgaagaccataaagatcataattatcagtatattgaaaaa
actgttgatggtcaaaagaaaatcctgattgatggcattgataatctaaaagaaaaatta
cagaaacaccaggaaatggctgaacaaattctaagcaaggaaaaagacattaagcgacaa
caggttgaagtgtttaatgaagttagacgagtcgctgatttgataacaaatgaattaatc
agctggtgtaaaaagttgttaaacttcttacaaggtgtgtgccatggacgaattaaagac
ctcacatttaagaaaaaagaaattgacacatacggaacaaaagcaaaacatataatagag
tttgttgaatcagctctttcctcaggggatgacctagctctgttgtataccaagagtatt
atgtccaaaaacatttcacaactaaatgaccaagaaattaacttctcaaaaaccttgctt
gacttgaacattcagtatgaaaatgacgctgtctttcttacaaaaaatgtgagcaaaatg
ggtttcataaatgtgaacggaaaatcctaccctcatcaggaagaaagcaagaccgcacag
tcacttgccagcagagaattagtgaaagcaaagattccaagtctaccgcaacctgttagt
actgaaggtcagacagttacaaaccctgttcaaagtatgacaaatgctgaactcttaaat
accatcagcaaagacaactttcagcaacacatcattgagttgctgagtcgagagcctctt
gcaactagagaaaaatacagagcactacctccggagaaaaagagacaatttttggaaaat
ctgcttcagtcacacaaacagcttcatctacagcagcagcaacagcagcagcaaccggca
ccatccaaccaacctgtccaacagcaacaacagcaagggtttaatcctctaggtgtatct
ggtccgcctcaaagacaacaagcattttcatcggatagtggggcgttgcaagagttgtac
cggcaaacacagaggatgccagcaccaccccaggctggattcatgaaccaaaaccctttc
caacgacaacaacaaattcagcaacagcaattacaacaacagcagttgcgacaacagcag
caacaacaacagttggcaagacagagaatgatgatgcaacagcagatacggcaacagcaa
ctgaatcagaatactaatgcccccttcctaacgagtccgtttgggcagccacagtcaaat
tcaaacttccaaagctggagaggtgccccggccagcatgcctatgaacacaaactccaag
gtcatcccagccaatcagcttccctcgacaggaaagtatgatttcattgaccccttaaac
ttgaggggcggttccggggagcccacacgagtaaaacaggagcccagggacaacccctcg
tgtcagttcagcggcaaggccacgcagcagagcccacaaccttccaatcatggtcagcct
caggcaccagcggttctttcacctacatctgccttcccaagttctacactacaattcccc
gccctttcccccagcctggggcttatagacagagggaacaggagcgatataaatacctta
atgatgtctcccgtgtttcaggctgtgccatcatctacatcctcttccccaagttccaca
ctgcgatctcctgcccatacccccagccctggacatatagatggcggacacatgggaaat
agatccactgcatcacctgctgtgctgcccgatattaatatcatggactctgatagaagc
atggcaatgaccggcctgatgcaccccaatggtcacatcatcagcccatacaacctgatg
ccccgtcacgaccccaatgatccctcagaggactactgcggggtgtgtcacaatggcggc
gatttactgtgctgtgaccgatgccccaaggtgttccacttgaactgtcactgtccagtg
atcagcagcaacttgtctccgagcgagacctggacgtgtacaatgtgtactcctgatgag
gaactgatcatcagagagccgatcccccgggagtttgagttgacaagcacaggcaagagg
aaggcacctaatggtcttgtagatagagaaataagggtttgtgagcgaattctactggag
ttattctgcaaggaggtcagcacggtcttccatgaaccagtgtccaaatctatcccaaat
tattacaagatcataactcacccgatggactttggtacgatcaagtgtaagctgcgacgc
gggcatttcgctcactacaactctattgaggaatacatcagagatgtgaagctggtcttt
aggaactgtatgaagtttaatgatccaatatctgatgtgtacggaatcggcatccagatg
aattcattcttcgagacgctagtggcccacttcctgccatgttatctccactgtcttaca
cgcagtgtgtcccctgaccagatgtctgaccccggcatggacgggccgagcaggatcaag
aaacgccgcagccctgcgccagattccacgcgtgatagcagtacacctccgatatga
DBGET
integrated database retrieval system
