Mya arenaria (softshell): 128231523
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Entry
128231523 CDS
T09995
Name
(RefSeq) nuclear pore glycoprotein p62-like
KO
K14306
nuclear pore complex protein Nup62
Organism
maea
Mya arenaria (softshell)
Pathway
maea03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128231523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maea03019
]
128231523
Messenger RNA biogenesis [BR:
maea03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128231523
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
FapA
Motif
Other DBs
NCBI-GeneID:
128231523
NCBI-ProteinID:
XP_052800436
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Position
4:complement(40578229..40590684)
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AA seq
543 aa
AA seq
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MAFNGKGFNFGTPTTSTSTSGAGMFGGQPASAGGFSFGSPAPLASTQPTQAAGFSLGTQA
ASSGFGASLGGGTTATQSASAGFSFGATSTPAAPAGFGFGGAVNSTPGTQATTTAPPPFS
LGGAKTSAPTGFSLAGQAGTPTGTAGFGLAGQATTAAGTAGFGLAGQASTAAGTPGGFSF
GAAPTGTLSAPGTTTQSSGLLSGLLSAPASTAPATTSTGFPLGGGTTLGGLGGTTLGGLG
GTTVGGTTLGGLGGTSLGGFGAKTTSTGLTLGAPATSTKMPSTATTTLNTGFGLTAPSAT
SAGGFGFGASTTKATTAAPGFGFGLSSTTAATSSAAGATTTSAVPSRQMNYKQLEDQINK
WMTELEEQERMFLTQATQVNAWDRLLVDNGEKITLLNGDLERVKVDQGKLEQELEFIKAQ
QHELEELLNPMEKSLEALPTSSLHPHADLERENTYQLADNIDAQLKRMVQDLKEIIDHLN
TSASTQDNNDPVLQITKILNAHMDSLQWIDTNSAMLSRRVEEVSRQMESQRKDQERNFRL
VYD
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcatttaatggaaaggggttcaattttggcacaccaacaacctccacctcgacatct
ggggcaggtatgtttggaggtcagcctgccagtgcgggtggtttcagttttggctcgcca
gcacctcttgcatctacacaacccacacaagcggcaggattctctctaggcacccaagct
gcctccagtggttttggagcatccctggggggaggtacaactgctacccagtctgcttcc
gcaggattcagttttggggctacttccactcctgctgccccagctgggtttggttttggt
ggagcagtgaactctacacctggcacacaggccaccacaactgcaccaccgccgttttcc
ctgggtggggctaagacctcagcacctacaggatttagtctggcagggcaagctggtacg
cccactggaactgcagggtttggtttagcagggcaagctactactgctgctgggactgca
ggttttggtctagcagggcaagctagtactgccgctgggacgcctggtggattcagcttc
ggggcagctcctacagggactctatctgccccaggtacaacaacccagagttcaggtctc
ctctctggtctgttgtctgctcccgcttctactgcccctgccacaacctccacgggattc
ccactgggaggggggaccactcttggaggattagggggaaccactcttggaggattaggg
ggaactactgtaggagggaccactcttggaggtttaggggggacttctcttggagggttt
ggggcaaagaccacaagcactggcctgacattgggagcaccagctacatccacaaaaatg
ccatccacagccacaacaacattgaatacggggtttggtttgaccgccccatccgcaaca
agtgccgggggattcggatttggggcctccaccaccaaggcaaccacagctgcaccaggc
tttggctttgggctctctagcacaacagctgcaaccagttctgcagctggcgctacaaca
accagtgccgttcccagtcgccagatgaattacaagcagctggaggatcagataaacaag
tggatgacagagttagaagagcaggaacgcatgtttctcactcaggccacacaggtcaat
gcctgggacaggctgcttgtggacaacggggaaaagatcacgctgctcaatggagacttg
gagcgagtaaaggtggaccagggtaagctggaacaggagcttgagtttatcaaggcccaa
cagcatgaacttgaggagctgttgaatccgatggagaaatcccttgaggctctccccaca
tctagtttacacccacatgcagacttggagagggaaaacacgtaccagctagctgacaac
attgatgcccagctgaagcgtatggttcaggacctgaaggaaatcatcgaccacctgaac
acctctgccagtacacaggataacaatgacccggttctccagattaccaagatcttgaat
gcccacatggactcactacagtggattgatacaaactcagctatgttgagtcgacgtgtg
gaagaggtatcacgacagatggagagccaaaggaaggatcaagagagaaacttccgtctt
gtgtacgactga
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