Mya arenaria (softshell): 128231562
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Entry
128231562 CDS
T09995
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2-like
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
maea
Mya arenaria (softshell)
Pathway
maea04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128231562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
maea03041
]
128231562
03110 Chaperones and folding catalysts [BR:
maea03110
]
128231562
04121 Ubiquitin system [BR:
maea04121
]
128231562
Enzymes [BR:
maea01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
128231562
Spliceosome [BR:
maea03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
128231562
Complex C
U4/U6.U5 tri-SnRNP related factors
128231562
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
128231562
Chaperones and folding catalysts [BR:
maea03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
128231562
Ubiquitin system [BR:
maea04121
]
Ubiquitin ligases (E3)
U-box type E3
128231562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
128231562
NCBI-ProteinID:
XP_052800520
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Position
4:complement(65356289..65368848)
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AA seq
521 aa
AA seq
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MGKKQHQKDKLYLTTTEWKNQFGGYKGKQVKNQDFRRLPFSCCTLSMQPFENPLCTKDGV
IYDLMSIVPFLKKYGINPVTGDKLSAKELVRLNFHKNADGKYHCPVTFKVFNENTHIVAV
RQTGNVFANEAVERLNVKTNFWRDLLTDEPFTRKDLITIQDPTNLDKFNIQKFYHVQKGL
KVTEDDEDVSSKDPKNRLKTINAETRDVLATLEKEYKAPEKRTETKKVADKFNSAHYSTG
AVSASFTSTAMEPTTQHEAAIIDEDIIRYERLKKKGYVRLLTNRGPLNLELHCDMVPKTC
ENFIKLTKRGYYDNTVFHRIIRNFMIQGGDPEGTGKGGESAWGGTFKDEFKPNLTHSGRG
VLSMANSGPDTNKSQFFITFRSARHLDGKHTVFGRVVGGLETLDAMEKIEADKKDRPQKE
IRIEATAVFVNPYEEVDEELANEREDELSRQAAAEAEKRKPKSRKEEPKIEHKVFSAGVG
KYINPSTLKRKMAETEATVSSSEGTKKKVKTKTSLSDFSAW
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaaagcaacatcaaaaagataaattatatctgacaactacagaatggaagaac
cagtttggcgggtacaaaggaaaacaggtgaagaatcaagacttccgccgtctaccattc
tcatgctgcacattgtccatgcagccatttgaaaatcctctgtgcacaaaagatggagta
atttatgatcttatgagcatagtccccttcttgaagaagtatggtattaaccctgtcaca
ggagacaaactcagtgccaaggaactggtcagactcaacttccacaaaaacgctgatggc
aagtatcattgtccagtgacattcaaggtcttcaatgagaacactcacattgttgcagta
aggcaaactggaaatgtcttcgctaatgaggctgtggagagactaaatgtcaaaacaaac
ttctggagggatctacttacagatgaaccattcaccaggaaagaccttattacaatacag
gacccaactaacctagacaaatttaacatccagaagttctaccatgtgcagaaaggcctc
aaagtcaccgaggatgatgaagatgtatcctctaaggatcctaagaaccgattgaagacg
atcaacgctgagacgcgcgatgtgctggccacattggagaaggagtataaagctcctgaa
aaaagaacagaaaccaaaaaagtagctgacaaattcaactctgcgcactactcaacgggg
gcggtttctgcctcgttcacctctactgctatggagcccaccactcaacatgaagcagca
atcattgatgaggacattatccgatatgaaagattaaagaagaagggctatgttcgtctg
ctcaccaaccgcggaccactgaatctcgaacttcattgtgacatggttccaaagacatgt
gagaatttcatcaagctgaccaagagaggctactatgataacaccgtatttcatcgcata
attagaaacttcatgattcaaggtggtgacccggaaggcactggtaaaggaggggagtca
gcatggggcgggacgttcaaggatgagttcaaacccaacttgacccactcgggccgtggt
gttctctccatggcaaactctggacctgacaccaacaagtcccaatttttcataacattc
cgatctgccagacatcttgatggaaaacatacagtgtttgggagggttgtaggtggcctg
gagacgcttgatgccatggagaaaatagaggctgacaagaaggatcgaccacagaaagag
atccgtattgaggcaacggcagtttttgttaacccatatgaggaggtggatgaagagctt
gccaatgagagagaggatgagttgagtcgtcaggccgctgcggaggcggagaaaagaaag
cccaagagtcggaaggaggagcccaaaatagaacacaaggtcttctctgcaggcgtcggc
aaatatattaatccttctaccctgaaaagaaagatggcagagaccgaggcaactgtttca
tcatcagagggcacaaagaagaaggtgaaaactaagacttcactttcagacttcagtgct
tggtga
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