Mya arenaria (softshell): 128231564
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Entry
128231564 CDS
T09995
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog isoform X1
KO
K15176
RNA polymerase-associated protein CTR9
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maea03021
]
128231564
Transcription machinery [BR:
maea03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
128231564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_8
TPR_12
TPR_16
TPR_CcmH_CycH
TPR_17
TPR_10
TPR_11
TPR_7
ANAPC3
TPR_Slam
ARM_TT21_5th
ARM_TT21_4th
ARM_TT21_C
TPR_9
PknG_TPR
TPR_EMC2
TPR_21
Peptidase_S41_N
Motif
Other DBs
NCBI-GeneID:
128231564
NCBI-ProteinID:
XP_052800522
LinkDB
All DBs
Position
4:34138736..34175848
Genome browser
AA seq
1137 aa
AA seq
DB search
MAAIEIPLRDTDEVIELDLAQLPEGEEVLSILRQEVAPLHIWYTLALEYYKQSKIDDFVK
ILDASRTDAGFDYDNSEKDQMKALDTLAAYYVQKAHREKNKDRKRELFTQATLLYTTADK
IIMYDQNHLLGRAYFCLLEGDKMDQADAQFNFVLGQSANNIPSLLGKACIAFNKKEFRGA
LAYYKRALRTNPDCPASVRLGMGHCFIKLNKIDKARMAFERALQLNHQCVGALVGLAILE
LNAKTQESIKNGVQLLSKAYTIDSTNPMVLNHLANHFFYKKDYQKVQHLALHAFHNTENE
AMRAESCYQLARAFHVQEDYDQAFQYYYQATQFASPNFVLPFFGLGQMYIYRGDNENASQ
CFEKVLKAQTNNYEAMKILGSLYSNSTEHARKETAKAHLKKVTEQFPDDVEAWIELAQIL
EQTDVQGALSAYGTATRILKEKVEADVPPEILNNVAALHFRLGNLQDAKKFYTTSLDRSR
AEAQHDETYYSAISVTTTYNLARLHEATHEYDEAERLYKTILREHPNYVDCYLRLGCMAR
DRGQIYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILARPSTKDDAY
SLIALGNVWLQTLHQPMKDKDKQKRHQDRALAMYKNVLRNDDRNIWAANGIGCVLAHKGC
INEARDVFAQVREATADFCDVWLNIAHIYVEQKQYVAAVQMYENCLKKFFKYHNTEVMVY
LARAYYKCGKLRECKNILLKARHVSPSDTVLLYNIALVQQKLATSILKDEKSSLKTVLSA
VRDLELAHRYFSYLSHHGDRMKFDLAQAATEARQCSDLLSQAQYHVARARKIDEEEQELR
KHRDEERAAVRQRFNEEKEARRRKKEEQEKLMMERRQVFVDKAKTMVFEAEPEERKSSKS
KNRRRDDGEILSENSEDERPRKKKRGKKGGREEDSDSGSDENAARKSSRKPRKERGKKKE
PKDKKKKKVLDDDGLSAKQRRKIVSKAMISSSEGSESEGEKLKIDVGADSGSDEGGNVGK
RRRIMSSDSEGDGGSVHRSRSRSQSGSRSGSASRSRSRSGSRSGGVSRSRSRSGSRSGSA
RSRSVSRSRSRSKSGSRSRSGSPAGSPRSPAGSGSGRSRSPSPNRSRSGSPAGSPTE
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgatcgaaatcccacttcgggacactgatgaggtcattgagttggaccttgct
cagctgcctgagggagaagaggtgttgagtattttaagacaggaagttgcccctcttcat
atttggtacacgttagctcttgagtactacaaacagagcaagattgatgactttgtgaag
atcctcgatgcctctcgcactgatgccggctttgactatgacaacagtgagaaagaccaa
atgaaggctctggacacacttgctgcttactatgtacagaaggcacacagagagaagaat
aaggaccggaagcgagagctgttcacccaggccacactgctctacacaacggctgacaaa
atcatcatgtatgaccagaaccatctgctggggagagcgtacttctgcctgctggagggg
gacaagatggaccaggctgatgcccagtttaactttgtcctcggacagtctgcaaacaat
attccttcactccttggcaaggcgtgtattgccttcaacaagaaggagttccgcggggcc
ctggcctactataagagggccctgagaaccaacccagactgcccagcgtctgtcaggctg
ggcatgggacactgcttcatcaaactgaacaagatagacaaggctaggatggcatttgag
cgagctctgcagttgaaccaccagtgtgtgggagccctggttgggctggccattctggag
ctgaacgccaagacccaggagtccatcaagaacggggtgcagctcctctccaaagcctac
accattgactccacaaaccccatggtcctcaaccacctcgcaaaccacttcttctataag
aaggactaccagaaggttcagcacctggccctgcacgccttccacaacactgagaatgaa
gccatgagggcagagagctgttaccagcttgccagggccttccatgtgcaggaggactat
gaccaggcgtttcagtactactaccaggccacacagtttgcctcgcctaactttgtgctt
cccttctttggtctcggacagatgtacatatacaggggagataatgaaaatgcttcccag
tgttttgagaaggtgctgaaagcccagaccaacaactacgaggccatgaagatcctggga
tctctatattccaactctacagaacatgccaggaaagaaacagcaaaggctcatctgaag
aaggtaacagagcagtttccagatgacgtggaggcatggatcgagctggcccagatcctg
gagcagactgacgtgcagggtgccttgtccgcatatggcacagcaacacgcatactcaag
gagaaggttgaggcagacgtacccccggagatcctcaacaatgttgccgcactgcacttt
aggctaggaaacctgcaggatgccaagaaattttacacaacctccctggaccgttcacgt
gcggaagctcaacacgatgaaacatattacagcgccatctctgtcacgacaacctacaac
ctggcacgtcttcacgaggctacacacgagtatgacgaggccgaaaggctgtataaaacc
atcctgcgtgaacatcccaattatgtggactgttaccttcgccttggctgcatggctcgt
gatcgtgggcagatctatgaagcctctgattggttcaaggaggctctgcaaatcaaccag
gaccaccctgatgcctggtcactgattggaaatctccatcttgcgaagcaggagtggggt
ccgggacagaaaaaatttgagcgtatccttgcccgccccagcaccaaggatgatgcttac
tccctcatagccctgggtaatgtctggctccagacgctacaccagcccatgaaggacaaa
gacaagcaaaaacgccaccaggaccgagccctggccatgtacaagaatgtgctccggaat
gatgaccgaaacatctgggcagctaatggaataggatgtgtgctggcacacaagggctgt
atcaatgaggcccgtgatgtgtttgcccaggttcgtgaggctactgcggacttctgtgat
gtgtggctgaacattgcacacatctatgtggagcagaaacaatatgtagctgctgtacag
atgtacgaaaactgcttgaagaaattcttcaaataccacaacactgaggtgatggtctac
ctggctcgagcctactacaagtgtggcaagctgcgggaatgcaaaaacatactgcttaag
gcgcggcatgtctctccgagtgatactgttctgctgtacaatatcgctcttgtccagcag
aaactggctacatccatccttaaggatgagaagagcagtctgaaaactgtcctttctgct
gtacgtgacctcgaactagctcacaggtacttttcctacctgagtcatcatggagacaga
atgaagtttgaccttgcgcaggctgctacagaggctaggcagtgttccgatctgttgtcc
caagcccagtaccacgtggctcgggcccggaagattgacgaggaggaacaggaacttcgt
aagcacagggacgaagaacgtgcggctgtccggcagagatttaacgaggagaaggaggct
cgtagaaggaagaaggaggaacaggagaaactcatgatggaacgcagacaggtgttcgta
gataaggcaaagacaatggtcttcgaagctgagcctgaggagcgcaagtcttccaaatca
aagaatcgccgacgtgatgacggggaaatattgtcggagaacagcgaggatgaaagacca
cgcaagaagaaacgaggcaagaagggaggccgggaagaagactcggacagtggaagtgac
gagaacgcagcacgtaaatcatcacgcaaaccacgcaaggagaggggcaagaagaaggag
cctaaggacaagaagaagaaaaaggtgttggatgacgacgggctgtcggccaaacagcgt
cgtaagattgtctccaaggccatgatatcttccagcgagggctcagagtcggagggggag
aaactcaaaattgatgtcggagcggacagtggcagtgatgaaggtggcaatgtgggcaag
aggaggagaatcatgtcctctgacagtgaaggtgatggtggctcggtgcaccgctcaagg
tcaaggtcacagagcggaagtaggtcagggtcagccagccgctctagaagtaggtcaggc
agtagatctgggggtgtcagtcgctcaaggtcacgcagtgggtcacgatcagggtctgca
aggtcgaggtcagtttcaaggtcaagatcacggtcaaagtctgggagcaggtcaaggtcg
ggaagccctgctgggtcaccaaggtcacctgcaggttcaggcagtgggcggtcaaggtca
ccaagcccaaacaggtcaaggtcaggtagtccggctggctcacctacagaatga
DBGET
integrated database retrieval system
