Mya arenaria (softshell): 128231614
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Entry
128231614 CDS
T09995
Name
(RefSeq) caprin-1-like
KO
K18743
caprin-1
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maea03019
]
128231614
Messenger RNA biogenesis [BR:
maea03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
128231614
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Gene cluster
GFIT
Motif
Pfam:
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
128231614
NCBI-ProteinID:
XP_052800601
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All DBs
Position
4:complement(58689164..58704797)
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AA seq
658 aa
AA seq
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MPSASTKTEIPVSAEPTDPFKRVLNVVDKKVRNLEKRKLKLDAYKEKKDSGAELEKDQQV
AVDKYGEVLTNLEFARDLQKQFSSINADAEKLLKKQAKRGKSEKQLAEVRRIKEVLQLQA
LLDSMGSDNVRQDFKTGKHGAIVLTEENLNQIDELYKLVSPTRDGEGDYLETLSEAADHI
VSLLEAKDKPVVGSTYKTLKELLDLISGCGYFERVKEEEEGKTMEPTGDVEFEVVEHKDV
PAADSEEVQASLPPEVPEEPEPTPEQPPKGMTTAEADAFFNTPVSQTVEQHEADLAAAAA
FSQQQRRPFQEIVSSVQGNFNFLQESTIEMETKREFSPHMDPAVVAAHPMPPSQPPMVRP
LATQTTESTNRPSSGFGASFPEQQSVNTAVTTVSHGAKAESSVFTQANQQQSQDFSNSGF
TQSNVSHLQSDISFPAGSESGFGKGSVESAPISHTQYDIPPQLPMPPGHDQSNSQDSQGG
SELDKKAGFQMNPNATEFQWNSQGEEQSKSSDDNFQGGTFTNSGFNSRDQRGGSGRGGFR
GGRGGNRDSRGGGNMSNGYNRSGRGGNYNRGYQQRSDYRSNDGYQGYNGNNYSNSGGFQK
RGGEGSRGAPRGDGNRGGQRGGFSRGGGGPRGGPSGPGGPQGANQPNPRGFGRPNFNN
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgccctctgcctctacaaaaacggagattccggtctctgcggagccgacagaccctttt
aagcgggtcctcaatgttgttgacaagaaggtccgcaacttggaaaaaagaaagttgaaa
cttgatgcatacaaggagaagaaggactcgggtgcagagttggagaaagaccaacaggtt
gctgttgacaagtatggagaggttctcaccaacttggagtttgcaagagaccttcaaaag
cagttttcctccatcaatgctgatgctgagaagctgttgaagaagcaggcaaagcgtggc
aagtcagagaagcagcttgccgaggttcggcgaataaaagaggtcctccagttacaggcc
ctcttagacagcatgggctctgacaatgtacgccaggacttcaagactggcaaacatggg
gccattgtgttgacggaggaaaacctgaaccagatagatgagctgtacaagctggtcagt
ccaacaagagatggggaaggcgattatctcgagacactctctgaggccgccgaccacatt
gtctcactccttgaggccaaggacaaacctgttgtaggctctacatacaagaccttaaag
gagctgcttgacctgatatcaggttgtggttactttgagcgtgtgaaggaggaggaggaa
gggaagaccatggagccaaccggggacgtggagtttgaggtagtggagcacaaggacgtg
cccgcggcagactctgaggaggtacaggcctcgctcccaccagaggtacctgaggaacct
gaacccactccagaacaaccaccaaagggaatgacaacagctgaagcagatgcatttttc
aacacacctgtgtctcagacagttgaacagcacgaggcggacctagcagcagcagcagca
ttctcacagcagcagcgacgcccattccaggaaatcgtctcatccgttcagggaaacttt
aacttcctacaggaatcaacaatcgaaatggaaacaaagagagaattctccccccacatg
gacccagctgtggttgcagctcatccaatgcccccttcgcagcctcccatggtccgaccc
ctggccacacagaccacggaatccacaaaccgtccatcatccggctttggagcctctttc
ccagaacaacaatccgtcaacacagcggttacaacagtgtcacatggagcaaaagctgaa
tcaagtgttttcactcaagctaaccagcaacaatcacaggacttttctaactctgggttc
actcagagtaatgtttctcacttacaatcggacatttcttttcctgccggcagtgagtca
gggtttggtaaaggatcagttgaaagtgctcccatttcccacacacagtatgatattcca
ccacagttacctatgccaccaggacatgaccagtcaaactctcaggatagccaaggaggc
tcagagcttgacaagaaagcagggttccaaatgaatcccaatgctactgaattccaatgg
aacagccagggagaggaacaatcgaaatcatccgatgacaacttccagggtggcaccttc
accaactctgggtttaactcacgggatcagcgtggagggagtggtcgtggtgggttccgc
ggagggcgaggtggaaaccgggactcccggggaggaggaaacatgagcaatggatacaat
cgcagtggtcgtgggggaaactacaatcggggttaccaacagaggtctgattaccggtct
aacgatggttaccaaggatacaacggaaacaattacagtaactccggggggttccagaag
cgtgggggagaaggaagtagaggggctcctcgtggagacggaaatagaggaggacagcgc
ggagggtttagtcgaggaggcggagggccacgtggtggacctagtggaccagggggacca
cagggtgccaaccagcccaacccaaggggatttgggcggcctaatttcaacaactaa
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