Mya arenaria (softshell): 128231669
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Entry
128231669 CDS
T09995
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
maea
Mya arenaria (softshell)
Pathway
maea03030
DNA replication
maea03420
Nucleotide excision repair
maea03430
Mismatch repair
maea03440
Homologous recombination
maea03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128231669
03420 Nucleotide excision repair
128231669
03430 Mismatch repair
128231669
03440 Homologous recombination
128231669
03460 Fanconi anemia pathway
128231669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
maea03000
]
128231669
03032 DNA replication proteins [BR:
maea03032
]
128231669
03400 DNA repair and recombination proteins [BR:
maea03400
]
128231669
Transcription factors [BR:
maea03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
128231669
DNA replication proteins [BR:
maea03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
128231669
DNA repair and recombination proteins [BR:
maea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
128231669
MMR (mismatch excision repair)
128231669
DSBR (double strand breaks repair)
HR (homologous recombination)
128231669
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
DUF8448
IBR
Gly_acyl_tr_C
Motif
Other DBs
NCBI-GeneID:
128231669
NCBI-ProteinID:
XP_052800689
LinkDB
All DBs
Position
4:23045324..23080036
Genome browser
AA seq
612 aa
AA seq
DB search
MPLELTEGAIESIVSGGQCDEPLIQIVGTKLISGGSGGSDRYRLLLSDGKHSYSHAMLAT
QLNTKMASGEMDNHCVVRVKQYICNTLQGDRRVMILLDVDVIAKGLEIGGRLGNPQPFKA
GQASENIAPTNNQAPASKNIPNGVAKTNSAPVLSNSAKSPPPSKPGFNVRSGGTPGTPGS
NRIHSIASLTPYQNRWRIRARVTQKSNIRTWSNSRGEGKLFSVNLLDESGEIRATGFTDT
VDKYYNMLEVNKVYYISKATLKTANKQYTSVKNDYEMTFNSDSMIEPCEEQTDLPSLSFD
FVKIDALESKQPQAVIDVIGVVKQVNDLANITTKAGKELSKRDIQLADQSGMVVNLTLWG
NDAETFNGEDNPVIACKGCRLSDWGGRSLSLLSSSQMMLNPDLREAAMLKGWWSREGCNK
EFQSYRSEGGAGAGGGSTNWKLLGQLKNENIGQDKADYFTSRGTVVFLRKENSMYQACPT
ESCNKKVVDQGNGMFRCEKCQAEYPKYKWRMILSVNLADHTGNQWVTCFQESAEIVLGIK
ADDLGNLKETNELAYDNVFEEASFKSYVFKLRAKVETYNDESRLKVGCTNASPIDYVEDG
KRLLDEINKLMI
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgccactcgaactaaccgaaggtgcaattgagtccattgttagtggaggacagtgtgat
gagccgctgattcaaatagtgggaacgaaactgatatctggtggaagtggtgggagtgac
agatatcgcctgctgctatcagatggcaaacacagctactcccatgcaatgttggccacc
cagctgaacacgaagatggcaagtggagagatggacaaccattgtgtggtcagggtgaag
cagtacatctgtaacacgcttcagggagacaggagagttatgattcttcttgatgttgat
gtgattgccaaaggattggagattggaggtcgtcttggcaacccacagccattcaaagct
ggtcaagcatcagagaacatagcacccacaaataaccaggcaccagcttcgaaaaacatc
cctaatggagtggcgaaaaccaacagtgccccagtgctgtccaactcggctaaaagccca
cccccatcaaaaccagggttcaacgttcgatcagggggtacaccaggaactccaggcagt
aatagaatacacagcattgccagtctcacaccataccagaataggtggcgtattcgtgcc
cgagtgacccagaaaagtaacattcgtacttggagcaattcccgtggggaggggaagttg
ttcagcgtcaatctgctggatgagagtggggaaattcgagctacgggattcacagatact
gttgacaagtattataacatgttggaagtcaacaaggtgtactacatcagcaaagccacc
ctgaagacagccaacaagcagtacacatcagtgaagaatgattatgagatgacgttcaac
tcggactcaatgattgaaccgtgtgaggagcagacagacctgccatctctctcctttgac
ttcgtcaagattgatgcactggagtcgaaacaaccacaagcagttattgatgtgataggt
gtggtaaaacaggtgaatgatctggcaaacataaccacaaaggcggggaaagagctgtct
aaacgagacatccagctggctgaccagtcaggaatggtcgtcaaccttactctctgggga
aatgatgccgagacgtttaatggagaggacaacccagtgatagcctgcaagggctgtcga
ctgtcagactggggtggccgatccctgtcactcttgtcgagcagtcagatgatgctaaat
ccagacctgcgagaggcggcaatgctgaagggctggtggagtcgggagggatgtaacaag
gagttccagtcataccggtctgaaggaggcgctggcgcaggaggtggaagtactaactgg
aagttgttaggtcagttgaagaacgagaatatcggccaggacaaggcagactactttaca
tccaggggaactgttgtcttcttaagaaaggagaactccatgtatcaggcgtgtccgaca
gagtcatgcaacaagaaggtagtggatcagggcaatggaatgttccgatgtgagaaatgt
caggctgaataccccaaatataagtggagaatgatcctttccgtgaaccttgcagaccat
acaggaaaccaatgggtaacatgtttccaggagtcagcagaaattgtacttggcattaaa
gctgacgatttgggaaacctaaaggaaactaatgagcttgcctatgacaacgtgttcgaa
gaggcttccttcaaaagttacgtctttaaacttagagctaaagttgaaacatacaatgat
gagagcagattaaaagttggatgtaccaatgcttcgcccatagactacgtggaggatggc
aaacgacttttggacgaaatcaacaaactcatgatataa
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