Mya arenaria (softshell): 128231677
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Entry
128231677 CDS
T09995
Name
(RefSeq) FACT complex subunit SSRP1-like isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
maea03000
]
128231677
03036 Chromosome and associated proteins [BR:
maea03036
]
128231677
Transcription factors [BR:
maea03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
128231677
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
128231677
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
SSrecog
POB3_N
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
UPF1_1B_dom
Motif
Other DBs
NCBI-GeneID:
128231677
NCBI-ProteinID:
XP_052800703
LinkDB
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Position
4:complement(41435584..41451572)
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AA seq
783 aa
AA seq
DB search
MSDYQEYPDIVQEVRGALNPGRLKLQGNSIVFRNQKTGRSDQFHGTDIEKVQWLKRARGY
CLKILLHSGHIHRFDGFKESDQEKLSSFVSRNYDVKLEPVDLSVKGWNWGQAKFEGNGLN
FLIDNNLAFEIPLNNVCQATPAKSEITLEFHQNDDAAVSLMELRFHIPPDQNNQESDNVS
EFYDQVMKNADIIQATGDAVCVFPEVQCLTPRGRYDIKMYTTYLQFHGKTFDYKIPYTSV
LRLFLLPHKDGRQIFFVVSLDPPIKQGQTRYHFLILLFSKDDEMTLECGLGDELEERYEG
KLQKEMTGLEYEIVSKVFKAVTTRKITVPGSFIGHSGSPAIGCSYKAATGLLYPLERGFI
FVHKPPVHIRFDEVAAVNFGRSSGSNRSFDFDVETKAGTVYTFSNIEKDEYGKMFEFAKN
KTLRMKNIGNKKAKDMTNYEDESDEEAGAHDAYLERMKAEGKDRDSDAFDDDSDSSDEDF
KPEDSASDVAEEYDSNPPTSSDESEEEPENSNDDEETKALKRAEKEKRQQERREKREKHE
KSKAAKAAREGSSPKTKTKTKKKSKEEKDPNKPKRPQTAYFIWFIEQRAKIKEKHPDFSV
VDISKKAGEMWGKMTNEEKEPYNEKNREAKKEYDIAMKEYNKNLKDEGGPPRPKSSSKSK
QKPSPKKPTDTKAGSGSAYKSKEFISDVESSSDDSDEDDKPLKKLKREKMEVDEDSGSGS
GSEEEKPSGVKRRSQRKDGEESDVGELPDDEEILSSPEHSEPGSPAGSDSGSGSGSGSGS
DSN
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgagtgactaccaagagtatccagacattgtacaggaggtcagaggagcgttgaaccct
ggccgcctgaaactccaaggaaacagtattgtgtttagaaaccagaagacaggacgatct
gaccagtttcatggcacagacatagaaaaggtgcagtggctcaaacgggctcgtggatac
tgtctcaagattctccttcacagtggacacattcacagatttgatggattcaaggaatcc
gatcaagagaagttgtcatcatttgtgtccaggaactatgatgttaaactggaacctgtg
gatctctctgtgaaaggctggaactggggacaggccaagtttgaaggtaatggtctaaac
tttctgattgacaacaacctggcatttgagattcctttgaacaacgtatgccaggcgacc
ccagccaaaagtgagatcacactggagtttcaccagaatgacgacgctgctgtatcgcta
atggagctacgatttcacataccccctgatcagaacaaccaagaatcagataatgtctct
gagttctatgatcaagtaatgaagaatgctgacataatccaggcaactggagatgccgtg
tgtgtcttccctgaggtccagtgtcttactccaagaggtcgctatgacatcaagatgtac
acaacttacctgcagttccatggtaaaacgtttgattacaaaattccctacacatcggtg
ctcagactttttctgctgcctcataaagatggcaggcagatcttctttgtggtgagcctg
gacccacctatcaagcagggccaaaccagataccacttccttatcctgctcttctccaag
gatgatgagatgaccctggagtgtggcctcggagatgagttagaggagagatatgagggg
aagctccagaaggagatgactggtctggagtacgagattgtaagcaaggtgttcaaggct
gtcacaacacgcaaaatcacagtccccggaagctttatcggacattcagggtcacctgct
attgggtgttcctacaaggcagccacaggtttgctgtaccctctggagcgtggcttcatc
tttgtgcacaagccccctgtccatattcgctttgacgaggtcgcagcggtcaacttcggt
cgcagttctggtagcaaccgctcatttgactttgatgtagaaacaaaagctggaactgtt
tacacgttctctaacattgaaaaagatgagtatggaaagatgtttgagttcgcaaagaac
aagactctcagaatgaagaatattggcaataagaaggcaaaggacatgaccaactacgag
gatgagtcggacgaggaagccggggcccatgatgcttatctggagagaatgaaggccgag
ggcaaagacagggacagcgacgcctttgatgatgacagcgactcatctgacgaggatttc
aaaccagaagattctgcaagtgacgtggctgaagagtatgacagtaacccaccaacgtca
tctgatgagtctgaagaggagcctgagaacagcaacgatgatgaggagacgaaggccctg
aagagagccgagaaagagaaacgccaacaggagcggagagaaaaacgagagaagcatgaa
aagtccaaggccgctaaggctgcgcgtgaaggctctagcccgaagacgaaaaccaagacc
aagaaaaaaagcaaggaagagaaagatcctaataagccaaagcgtccccagactgcatac
ttcatctggtttattgagcaaagggctaagattaaggagaaacatccagacttctcggtc
gtggatatctccaagaaggctggagagatgtggggcaaaatgaccaatgaggaaaaagag
ccatacaatgaaaagaacagagaagcgaaaaaggagtatgatattgctatgaaggaatac
aacaagaaccttaaagatgaaggtggacctccgaggccaaaatcaagctccaagtccaag
cagaaaccaagcccgaagaagccgacagacacaaaagcagggtcaggctctgcatataag
agtaaggagtttatctctgatgtggagtcatcatctgacgactccgatgaggatgataaa
ccactgaagaagttaaagcgtgagaagatggaagttgacgaggattctgggtcggggtcc
ggctccgaggaagagaagccatcgggggtcaagcggagatcacagagaaaggatggggag
gagtcagatgtcggcgaactgccggatgatgaagagattctgagctctcctgaacattct
gagcctggttccccggcgggtagtgactcaggttctggctccggttctgggtctggatct
gactcgaactga
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