Mya arenaria (softshell): 128231858
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Entry
128231858 CDS
T09995
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
maea
Mya arenaria (softshell)
Pathway
maea03030
DNA replication
maea03410
Base excision repair
maea03420
Nucleotide excision repair
maea03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128231858
03410 Base excision repair
128231858
03420 Nucleotide excision repair
128231858
03430 Mismatch repair
128231858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
maea03032
]
128231858
03036 Chromosome and associated proteins [BR:
maea03036
]
128231858
03400 DNA repair and recombination proteins [BR:
maea03400
]
128231858
DNA replication proteins [BR:
maea03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
128231858
DNA Replication Termination Factors
ELG1-RFC complex
128231858
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
128231858
DNA repair and recombination proteins [BR:
maea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
128231858
Check point factors
HRAD17(Rad24)-RFC complex
128231858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
AAA_16
Rad17
AAA_14
Mg_chelatase
AAA_5
AAA_24
Viral_helicase1
AAA_11
AAA_assoc_2
RuvB_N
nSTAND3
DEAD
MipZ
AAA_19
DNAX_ATPase_lid
AAA_25
AAA_18
AAA_28
AAA_30
MeaB
Gp44_lid
MCM
ABC_tran
DUF815
SLFN-g3_helicase
FtsK_SpoIIIE
RNA_helicase
bpMoxR
AAA_3
CbiA
IstB_IS21
NTPase_1
ATPase_2
Motif
Other DBs
NCBI-GeneID:
128231858
NCBI-ProteinID:
XP_052801056
LinkDB
All DBs
Position
4:43878571..43887957
Genome browser
AA seq
344 aa
AA seq
DB search
MEDMDTTDIQENKPSTSDTNVYEAPWVEKYRPVKLKDIVGNEQTISRLEVFAREGNVPNV
IIAGPPGTGKTTSILCLARAMLGASYREAVLELNASNDRGIDVVRNKIKMFAQQKVTLPA
GRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTK
LSDSQVLKRLLEVCEAENVSFTDDGLEAIVFTAQGDMRQALNNLQSTYQGFEHVNSENVF
KVCDEPHPLLIKDMLQHCVNGNVDEAYKIMAHLWNLGYSPEDIINIVSRVCKNHDMPEYL
KLEFIKEIGYTHMRIAEGVQTLLQMSGMLARLCKKSAEPNVLAS
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggaagatatggacaccactgatattcaagaaaataagcctagcacgtctgatacaaac
gtttatgaggcaccctgggttgagaagtacagaccagttaaactgaaagatatcgttgga
aatgagcagaccatttcaaggctggaagtatttgcaagggaaggaaatgttccaaatgtc
atcattgctggacccccaggaactggaaaaaccaccagtattctgtgtttggcgagggcc
atgctaggagcgtcatacagggaggctgtacttgagctgaatgcttcaaatgacagagga
atagatgttgtccgcaacaagattaaaatgtttgcacagcagaaagttacactgccagca
ggtcgtcacaaaatcatcatccttgatgaggcagacagtatgacagatggagcacagcaa
gcattgagaagaaccatggagatctactccaaaactacacgctttgccttggcctgtaat
gcctcagacaaaatcatagagcctatccaatcacggtgtgcagttttgcggtacacaaag
ttgagtgactcccaggtcttgaagcgtcttttagaagtgtgcgaggcagaaaacgtgagc
ttcacagacgatggactggaggctattgtgttcacagcgcagggagatatgagacaggct
ctcaacaatcttcagtccacatatcaaggatttgaacatgttaacagtgaaaatgtattc
aaggtatgtgacgagccccaccccctcctcattaaagacatgttacaacactgcgtgaat
ggtaacgttgatgaggcttacaagatcatggctcacctctggaacctcgggtactcgcct
gaggatattatcaacattgtgtcacgggtctgcaagaatcatgacatgcctgaatatctc
aagctggaattcatcaaggagatcggctacacccatatgaggatagcagaaggcgtgcag
acgcttctacagatgtccggcatgctggctaggctgtgtaagaaatctgcagaacccaac
gtgctggcatcctga
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