Mya arenaria (softshell): 128231920
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Entry
128231920 CDS
T09995
Name
(RefSeq) nuclear receptor ROR-gamma-like isoform X1
KO
K08534
RAR-related orphan receptor gamma
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
maea03000
]
128231920
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
maea03310
]
128231920
Transcription factors [BR:
maea03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128231920
Nuclear receptors [BR:
maea03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
128231920
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Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
128231920
NCBI-ProteinID:
XP_052801132
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Position
4:63530194..63536144
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AA seq
568 aa
AA seq
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MKSVLIFAVHYLFLNKEYYKKECLVPRQWTKVHWSIQRLRHQLESAVTNRLKRRLRLVKM
EPAGGRGSSPKRVCWRVTTCCFRHVRCAEGAPQASISASSRARRAFFRRALIHKQAYMCL
GDGSCDVTTAERKSVICSACRLQKCMTLGMSTNSVRKGRYSVALRTQAIVEAKTLRGEDP
GVMIATRSPIPSSRAADTTQSLEETKRHREEDTCLMVATRCSPSPSSQVDAVSEDAQSIA
CSEDRQTRPGKGVQSPSSIQAVFETDASPGSISQIPDALELSVERFVPLGELDLLIDTLV
SCQDLVYPNIRRQLAFSRDIQQCQIKTYEELKAKKEMFARLFGESNAPTTEEFQTIFAET
GIDVDDRLAHFNMKGRHMEATIAQNINFVKIIPGFRHLCPQDVSKLIKASHMEFWLFVNY
LLVNNKLGLAVSCDGSRSSTKEQICKFWCSEWVDRYFRFTDSLHALSLSAEEIALLRVII
LTFTDRCSLLKPAPISALQEKFVECLRYQISKTQQNPDTRLRMFMDRLLAVRELTEINMR
SNRKFLQEWNFVIQDFPLWWEMLSFDEI
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctgttttgatattcgctgtgcactacttgttcttaaataaggaatattacaaa
aaggaatgcttggtaccgagacaatggacgaaggtacattggtcgattcaaagactccga
caccaactggaatctgcagtcacgaaccggttgaaaagacggttacgcctcgtgaagatg
gaacccgcgggcggaagaggaagcagtccaaagcgcgtctgttggcgggtgacaacatgc
tgtttccgccatgtaaggtgtgcggaaggagcgccacaggcttccatttcggcgtcatca
cgtgcgaggcgtgcgtttttccggcgcgcgttgatccacaagcaggcgtacatgtgccta
ggagacgggagctgtgacgtcacaactgcggaacggaagtcggtcatctgctcagcctgt
agactccagaagtgcatgacgctcggcatgagcacgaacagtgttcgaaaaggtcgttat
tcggtcgcgctgaggacacaggcgatagtggaggcaaagacgctgcgaggggaggaccca
ggggtaatgatagccacccgatctccaatcccgtcctcgcgggctgccgacactacccag
tcgttagaagagacaaagaggcatcgggaagaggacacatgccttatggtagctacccgg
tgttccccgtccccgtcctcacaagttgacgccgttagcgaggacgcacagtcaatcgct
tgttcagaggatagacaaacacgacctgggaaaggcgttcaatcaccatcgagtatacaa
gcggtattcgagacggatgcctctcccggaagtatcagccagatcccggatgccctggag
ctgtccgtagaacggttcgtgccgcttggggaactggatctgctcatagacacgctggtt
tcgtgccaggatcttgtgtacccgaatattcgcaggcagctcgcgttctccagggatatt
caacaatgccagataaaaacatatgaggaattaaaggcaaagaaggagatgttcgcccgt
ctgttcggggagtctaacgcgccgactacggaggagtttcagacgatcttcgctgagacg
ggcatcgacgttgacgaccgactggcccacttcaacatgaagggaagacacatggaggcg
accatcgcgcagaacatcaacttcgtcaagatcatccccggcttccggcacctctgcccc
caagacgtgtccaagctcataaaggcgtctcatatggagttctggctgtttgttaactac
ctcctggtcaataacaaacttgggcttgcggtcagctgtgacggctcccgctcatccacc
aaggagcagatctgcaagttctggtgctccgaatgggtggaccgctacttccggttcacg
gattccctgcacgcgctcagcctctcggccgaagagatcgccctgctcagggttatcatc
ctgacgttcaccgatagatgttcattacttaagccagctccaatatcggcactgcaggag
aagtttgtcgaatgtctccgctaccagatatcgaagacgcagcaaaatccggatacgcgt
ttgcgcatgttcatggaccgcctcctggcagtgcgtgaactcacggaaattaacatgcga
agtaaccggaagttcctgcaggagtggaactttgtcatccaggatttcccgctctggtgg
gagatgctgtctttcgatgaaatttag
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