Mya arenaria (softshell): 128232083
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Entry
128232083 CDS
T09995
Name
(RefSeq) syndetin-like
KO
K23288
syndetin
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
maea04131
]
128232083
Membrane trafficking [BR:
maea04131
]
Protein recycling
Others
EARP complex
128232083
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
128232083
NCBI-ProteinID:
XP_052801392
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Position
4:40821313..40847565
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AA seq
949 aa
AA seq
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MNMDLKNKLKSLIRKQDSLPSPIEENISHELFNGEPAVAKYKHEVLQSNPQEDREIMEKI
DPEYYQDVDASQYELEKLPEVVDLERVDDDRNRLRRQLQSVSKKVSELVLQNHPAYAAEL
QRVMELQKTLQLATIICKNGRSQLSEASHKFTMTSLQLLANVRKRQQLKGLLKSIRTIKT
LQRTDLRLREMLVEEDFCGAIQLCLECQKAAALLKHYNCISELSSKLSDTLELIEEQLDF
ALSRTCSQFDETHYEKVQTAYGLLGKRQNALDQLHLHFTSAIHNTAFQVVLGYVELCNHG
STETNFNKMQFSDLCKHVTIESFTPCLVGLCKALWSIMRSYHSIARWHEKHDHLDTVSQD
EAARSGEEMTAMYIKQKLEHGRVRIWQDVQQKVRTYILAVSLSEYKLEEFIQFLDIVNRM
IDIGEYFCESKSEGLQDSLKQQSLNYFKNHHRAKMDELQMFLENEGWELCPVKSSFHVLN
LVEFKFMRQSASSQKILANQNLAEQDNGQFESSRKRQYFEEFSGDSTPFDIQTESEENED
VFAGTGDDGNGEEEFSDSDSDVPDELKHDFIDELTGETHSRPGKRKFSRSRSFQKHVSIV
TNTSLNVFRVIGRYIQMMRLLKPVAFDVMWSMAQLFDFYMYSVYLFYGSALSSMDNRTIN
IRLKSTLMRIKDSLILDLDASDTSDDLEQREKIPAPHLSPIVDLNNPERMFGLPERIVAA
ESLVFLGEQLEFLQPHLEALIPVNKRPFLQQFYSQTVNMAAELRKPVYWSVSLRVIPYDT
VLQHMATVRWDVKEIMSQHNTYVDVLMQAYMSFDTRLADMCKQMPVPRATYDHLWDQILR
LSARTFVEGYANAKKCSIEGRALMQLDFQQYLKNIEKLVDLRPIPDREYVEGYIKAYYFP
ENQLEIWLPEHREYSFKQLTSLVNAVDHLNRKAKQKLVSMLEDMEKPRR
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggatttaaaaaacaaactgaaatcactcataagaaagcaggactccctgcca
tcacccatcgaagaaaatataagccatgaactgttcaatggtgaaccagcagtagccaaa
tataaacatgaggtattgcagagtaacccccaggaggatcgggagatcatggagaagatt
gatccggaatattaccaagacgtagacgccagccagtatgaactggagaaactgccggag
gtggtggatctggagagggttgatgatgataggaacagactccgacgtcagcttcagtct
gtgtcaaaaaaggtatcggagctggtgctacagaatcacccagcatacgctgcagagcta
cagcgtgtaatggagctccagaaaaccctccagcttgcaaccatcatctgcaaaaatggc
aggagtcagttgtctgaggcgagccacaagttcacaatgacgagcctacaattgctggct
aatgttcggaaacgacagcaactaaaaggccttctcaaatcaattagaacaatcaagaca
ttgcaaagaacagacctgaggttgcgtgaaatgctggtggaagaagacttctgcggggct
attcagctctgcctggagtgtcagaaagctgctgccctgcttaaacactacaactgcatc
agtgagttgagttcaaaactgtcggatacccttgagttgatagaggagcagctggacttt
gccctgtcacggacctgcagtcagtttgatgagacacactatgaaaaggttcagactgca
tacggcttgctggggaagagacagaatgccctggaccagctgcacctgcacttcaccagt
gcaatccacaacacagccttccaggttgtccttggttatgtggagctgtgtaaccatggt
agcacagaaacaaacttcaacaagatgcagttctctgacctctgcaagcatgtgacgata
gagagtttcactccatgtctggttgggctgtgcaaggccttatggagcattatgaggagt
taccatagtatagctcgctggcatgagaaacacgaccatcttgacacagtgtcacaagat
gaggctgcacgttctggtgaagaaatgactgctatgtacataaagcagaagttggagcac
ggacgagtacgtatctggcaggacgtgcaacagaaggtgcgcacctacatcctcgctgtt
agcctctcggaatacaagctggaggagtttatacagttccttgacattgtcaacaggatg
atagatattggggagtatttctgtgagagcaagtccgagggtctccaggactcccttaaa
caacagagcctcaattacttcaagaaccaccacagggccaaaatggatgagttacagatg
ttcctggagaacgagggctgggagctgtgtccggtcaagtcatccttccatgttctcaac
cttgtggagtttaagttcatgcgccaatcagcgtcctctcagaagattctggccaatcag
aacctcgcagagcaggacaacggccaatttgaatcctccaggaagcgtcagtactttgaa
gagttttcaggggacagtactccatttgatatacagacagagtcggaagaaaatgaagat
gtgttcgctggcacaggggatgacggtaatggagaggaggagttcagtgacagtgactct
gacgtgcccgatgagctcaaacatgatttcattgacgagctcacaggagaaacacattca
aggcctgggaaaaggaaattttccagaagcagaagtttccagaagcatgtttccatagta
acaaatacctcgctcaatgtgttcagggtcattggtcgttatattcagatgatgcgactg
ttaaagcctgtggccttcgatgttatgtggtccatggcccagctctttgatttctacatg
tattctgtgtacctgttttatggatctgctttgtcgtccatggataaccgaaccataaat
attcggttgaagtcgacactgatgagaataaaggatagcctcatcttggatctggatgca
tctgatacctctgacgacctggaacaaagggagaaaatcccagcccctcatctgtccccg
attgtggacctgaacaatccagagaggatgtttggactcccagaacgtattgtggcagca
gagtcactggtgtttcttggggaacagcttgagtttctccagccccacctggaggccctg
atcccggtcaacaagaggcccttcctccaacaattctactcacagacagtgaacatggca
gctgagttacggaaacctgtgtactggtccgtgtccctgcgtgtaatcccgtacgacacg
gtgctacaacatatggccactgtgcgttgggatgttaaggagatcatgtcacagcataac
acatatgtggatgtacttatgcaggcttatatgtcattcgacacccggcttgccgatatg
tgcaagcaaatgccggttccccgcgccacatatgaccacctctgggaccagatcctccgt
ctgtccgcacgcacattcgtcgagggatatgccaacgcaaagaagtgcagcatagaaggc
agggccctaatgcagctggattttcagcaatacctcaagaatattgaaaaactggtggac
ttaaggccaattccggaccgtgagtatgtggaaggatacattaaagcgtactactttcct
gagaatcagttggagatctggctcccagaacacagggagtacagttttaagcagttgact
tcgctagtgaatgcagtggaccatttaaacaggaaggcaaaacagaaactggtttctatg
ctagaagatatggagaagccacgcagatag
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