KEGG   Mya arenaria (softshell): 128232146
Entry
128232146         CDS       T09995                                 
Name
(RefSeq) DNA repair protein XRCC1-like isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
maea  Mya arenaria (softshell)
Pathway
maea03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:maea00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    128232146
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:maea03400]
    128232146
DNA repair and recombination proteins [BR:maea03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     128232146
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT DUF5650
Other DBs
NCBI-GeneID: 128232146
NCBI-ProteinID: XP_052801500
LinkDB
Position
4:complement(57511370..57525135)
AA seq 613 aa
MPAIKFQHIVSCSSEDKNNPADNLLKPEGSHKWKCSTAGEKSVSVVIQLEKASQIHSMDI
GNEGSAFVEVLVGRSSATSDQDYQVLLVASSFLTPMEARNGTNRTSVRMFDISKLSAPAA
KEKWDRVKIVCSQPFNKTSTYGLSFIKLHSPPEAGEKQEPKQLGFFKLKDDGNGHVKTGT
IFSHRGKPEAPSTPVTGAAAARAASRLADTAGGSSTPKPITPKPITPKPSPAAASSSNTG
KQESKTTPSQKTEKRKHAVSDDDTDEDTEKPTLRKQFTSLSSVASRDSAHSEKQPPLKKT
KSEPPKESPKKEFGHLMDRVVFVLSGFQNPFRGELRDRALAMGAKYRADWGKDCTHLVCA
FPKTPKYNQVKGKGRIVDKKWIGDCYKQKKLLPWRDYRLGDADSPDEDSEEEIITKTPAK
QSKAKPTPKRKDSTPPPIPAVSDSDEEMYGGATDSGEDTEDEIRKMKEKEAGKKGGPSKK
SPIKPATDDPYGVETDEDEPGPSKSGADSDSADSGLPELPDFLQDKNFFIYGSMDVTERR
LMNRYIVAYGGELEDYMSDKVNYVVSSAKWDNNFDDALSDNPNLVFVKPKWVHVCHDKQK
LVPHQPYIVVPDA
NT seq 1842 nt   +upstreamnt  +downstreamnt
atgccggcaatcaaatttcagcatatcgtatcatgtagtagcgaagataagaacaaccct
gcagacaaccttttgaaacctgaaggcagccataaatggaaatgttccactgccggagag
aagagtgtctcagttgtgattcagctggagaaggcatcccagatccacagcatggacatt
ggcaatgaaggctcagcatttgtggaggttttggtgggaaggtcttcagctacctcagac
caggactaccaggtgttgctggttgcttcatcatttttgacaccaatggaagcccgtaat
ggcacaaacaggactagtgtgcgcatgtttgacatcagcaaactgtcagccccagctgcc
aaagagaagtgggatagggttaaaattgtatgctcacagccatttaacaagacgagcacg
tatggtctgtcatttatcaagctccacagcccaccagaagcaggggagaaacaggaacca
aagcagctgggcttcttcaagctgaaggatgatggtaacggccatgtgaagacaggaacc
atattttcacacagaggcaaaccagaggcaccttccacacctgtcactggagcagcagca
gctcgggcggcctcaagacttgctgacactgcaggcggttcctccacaccaaaacccata
acccccaagcccatcacccctaaaccttccccagctgcagcatctagctcaaacactggc
aaacaggagagtaagactacaccctcacagaagactgagaagcgtaagcatgctgtgagt
gatgatgacacggatgaggacacggagaaacctaccctgcgtaaacagttcacaagtctg
tcctctgtcgcatcccgggactccgctcacagtgaaaaacaaccacctctcaagaaaacc
aaatctgaaccccctaaggagtcccctaaaaaagaatttgggcatctcatggatcgagtg
gtgtttgtgctgagtgggttccagaacccattccggggtgagctacgggaccgtgctctc
gccatgggagccaaataccgcgctgattggggcaaggactgcacacaccttgtgtgtgca
ttcccgaagactcctaagtacaaccaggtgaagggtaagggccgcattgtggacaagaag
tggatcggggactgctacaagcagaagaaattgcttccgtggagggactacagactggga
gatgctgattcaccagacgaggattcagaggaggaaatcataacaaaaacacctgctaag
cagtctaaagcaaagccaacccccaagagaaaagatagtacccctcccccaatcccagca
gtatcagacagtgatgaagagatgtacggtggggccactgacagcggagaagacacagag
gacgaaatcaggaaaatgaaggaaaaggaggctggaaagaaaggtggtccaagtaagaaa
tccccaatcaagcccgccacagacgacccatatggggtcgagacagatgaggatgaacca
ggtcccagtaagtcaggcgctgattctgacagtgcagacagtgggctcccggaacttcca
gatttccttcaggacaaaaacttcttcatttatggcagtatggacgtgaccgagaggaga
ctcatgaatagatacatcgtggcttatggaggggaattggaggattacatgtctgacaag
gtcaactacgttgtgtcatctgcaaagtgggacaacaactttgatgatgccctgtcagac
aaccccaacctagtgtttgtgaagccaaagtgggtacatgtgtgtcacgataaacagaag
ctggtgccccaccagccatatatagtggtccctgatgcttga

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