Mya arenaria (softshell): 128232448
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Entry
128232448 CDS
T09995
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
maea
Mya arenaria (softshell)
Pathway
maea04140
Autophagy - animal
maea04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128232448
04148 Efferocytosis
128232448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
maea04131
]
128232448
Membrane trafficking [BR:
maea04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
128232448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
zf-RING_Vps41
WD40_Prp19
Clathrin
WDR55
Beta-prop_HPS5
Beta-prop_EML_2
zf-RING_5
RNA_pol_Rpb2_3
EIF3I
zf-C3H2C3
zf-RING_2
zf_RING_Vps8_fungal
zf-UDP
Motif
Other DBs
NCBI-GeneID:
128232448
NCBI-ProteinID:
XP_052801960
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Position
1:complement(9751905..9788041)
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AA seq
870 aa
AA seq
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MATSHGTGSDSVPESQTMKSENETVSSEDETEEESDDSEEDQEPKLRYDRVSNDLKKILE
KDCASCMAVHAKFLALGTHWGAIHILDYLGYNIKGKEYPAHTCTVNQISVDDNGDYIASC
SDDGKVRITGLYESDHDQIVNFDRPVKSVALDPNFNNHRFVTGDDKLILNERGFLTRHKM
TTIHQGEGPIRTIKWKGDLIAWSNSYGVQVYDMSSRSRITSISKDHNYRPDLHNCNLHWK
DERTLLIGWADTVKVCLVKERKEQDVRDLPPKYVEIIAMFNTPEYMVCGIASLDSNLVLL
TYDKPTQPETVQSISSRPNLRIVDPHLNYYEEVSNDALTIRGYQNYRCNDYHLEPMCMTE
NVVEDNLFYIISPKDVVVARPRDQDDHVAWLLEHEEFEQALEAASLFSKELKKHTYYDIG
RSFLNYLLENGRFEDAARLCVKVFGKNKDYWEAEAYVFAKLGQLKSLAPFLPRSDPQLSP
AIYEMVLNDFLQTDAKVFLQLIKEWPHTLYQVQTIISALIDRMDRDRNNRALLQALAELH
GFKKEFDKALAIYIKLKHPDVFKLINRHSLYEAVSDRIVQLMEFDKDNAVKMLIDNIGKI
PVEKVVRQLERNPEFLYVYLDRLASTDQQLVTPYSGNMVKLYAEFNQAKLLPFLRSSIPY
PLDMALKVVEERSLRPEQVFLLGRMGNIKQALQLITDELRDVDQAIEFCKEHNDQELWED
LIQHSLNKPNFIRGLLNNIGTHVDPSNLIKRIQTGMEIPGLRDSLVKILQDYNLQISLRE
GCKKILVADSYGLMNRLVKTQKKAISVETSHVCQLCQERILVTDTHRASDITVFFCSHAV
HDLCLIGSTDNCPICSTQRRGPGSGGMFAK
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctcccatggaacgggaagcgattctgttcccgaaagccaaacgatgaagtct
gaaaatgaaacagtttcctcagaagatgaaacagaggaagaatctgacgactctgaagag
gaccaggagccaaaactacgctatgaccgagtctccaatgaccttaagaagatactggag
aaagactgtgccagttgcatggctgtgcatgccaagttcctggccctggggacacattgg
ggagccatccatattctcgactaccttggttacaacattaaagggaaggagtacccagct
cacacatgtaccgtaaaccagataagtgttgatgataatggagactacattgctagctgc
tcggatgatggaaaggtgcgaatcactggtttatatgaatcagatcatgaccagattgtc
aactttgatcggcctgtaaagtcagtggccctcgatccaaattttaacaatcacaggttt
gttacgggtgacgacaagctgattctaaatgagcgaggatttctaacacgccacaagatg
acaacaatacaccagggagagggaccaatcagaaccatcaaatggaagggcgacctgatt
gcatggtccaatagctatggggtccaggtgtatgacatgtcgtcccggtccagaattact
tctatatccaaggaccacaactataggccagacctacacaactgtaatcttcattggaag
gatgaaagaacgcttctgattggctgggctgacacagtcaaggtgtgtttggtgaaggaa
cgaaaggaacaagatgtacgggatctcccaccaaaatatgtcgagattattgcgatgttc
aacaccccagaatatatggtatgtggtattgcatcactggattcaaatctggtcctgctg
acgtacgacaaaccaacacaaccagagactgtacagtccatctccagcagaccaaacctc
cgtattgtagacccgcatctgaactactatgaagaagtgtctaacgatgccctcaccata
cgaggctaccagaactaccgctgtaatgactaccatctagagccaatgtgcatgactgag
aatgtggtggaagataacctgttctatatcatcagtccaaaagatgtagtggttgcgagg
ccgagagatcaggacgaccatgtggcctggctcctcgagcatgaggaattcgagcaagca
ctggaggcagccagcttattttcgaaggagttgaagaaacacacatactatgatattggt
cgcagtttccttaactacctcctggaaaatgggcgcttcgaagatgctgcccgcctgtgt
gtgaaggtgttcgggaaaaacaaagattactgggaagctgaggcatatgtgttcgccaaa
ctcggacaactaaagtctctggccccttttctgccccgcagtgaccctcaactgagtcca
gccatctatgaaatggtgcttaacgattttcttcaaacagatgcaaaggtgttccttcag
ttaatcaaagaatggccccacactttataccaggtccaaacaatcatatcggccctcata
gaccgtatggatcgagacagaaacaatcgggccctgctccaggctttagctgaactgcat
ggattcaagaaggaatttgacaaggccctggccatctacattaaactaaagcaccctgat
gtcttcaagctgataaaccgccactcactgtacgaagccgtcagtgacagaattgttcag
ctgatggagtttgataaggataatgctgtcaaaatgctcattgacaatattggaaagatt
ccagttgagaaagtggtgagacagcttgaaagaaatccagagttcctttatgtgtacctg
gacagactggccagtactgaccaacagctggtcactccatattctggaaacatggtgaaa
ctgtatgcagagtttaaccaagccaagttacttccctttttgcgtagtagcatcccctac
ccgcttgatatggctcttaaagtagtagaggagcgatcattacgaccagagcaggttttt
ttgctgggtcgtatgggcaatatcaaacaggctctgcagctgatcacagatgagctcaga
gatgtggaccaggctatagagttctgtaaggaacacaatgatcaagaactgtgggaggac
ctcatccagcactccctcaacaaaccaaactttatccgaggcctactgaacaacattggc
acgcacgttgacccctccaatctaatcaagcgtatccagaccggcatggagatacccggc
ctacgtgactcccttgtgaagattcttcaagattacaatttacagatttccttgcgtgaa
ggatgcaagaaaattttggtagcggatagctacgggctcatgaatcgactcgtcaaaacc
cagaaaaaagccatctcagtggaaacaagccacgtgtgccagttatgccaggaaagaatt
ctagtcacagacactcaccgagcaagtgatatcacagtgttcttctgtagccatgcagtt
cacgacctttgtcttattggaagtacagataactgtccaatttgctctacacaacggcgt
ggtcctggcagtggaggaatgtttgcgaagtga
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