Mya arenaria (softshell): 128232813
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Entry
128232813 CDS
T09995
Name
(RefSeq) vitamin D3 receptor-like
KO
K08533
RAR-related orphan receptor beta
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
maea03000
]
128232813
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
maea03310
]
128232813
Transcription factors [BR:
maea03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128232813
Nuclear receptors [BR:
maea03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
128232813
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
128232813
NCBI-ProteinID:
XP_052802520
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Position
4:complement(8128801..8138455)
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AA seq
531 aa
AA seq
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MSEYTETSPSDDANDMPVMQVTEHVLLVDKKNTKYGADEQEKPVIILPVKKRKVETVKRQ
RAKNIGVSQKQCKLSFPPCRVCLGPGTGLHYGVNSCESCKSFFRRCLTRKEEYKCSKDKN
CPVTSQVRGNCSGCRYKRCLEVGMSREAACLGRYTLSRRTKTIMEAKGEEYIETNKFSHG
ARNDLSTRSNSPGDILLQPSRQDIPFQSSPIIEVVMDEKSELSVKVIRPDISQAYLEELE
LIEKLVVSMEQVRPFGSIVSDIQIKAKLKEDYDNFMAKAQVFGKMKPVPQDEYFALLEST
GIDIDGRQEFLRQSAMSCQPVLHSYIAFANIVPGFSSLSLEDQCSLLKTSHFEVFLFLTY
KGYDPNLQMILTETGKAYHIDQAADIFYSRNLIDSIFDVCKKIQALDLTKEETALLLAIA
VTFGDRCQLEDSTKVDEIQLRVVQIFRSFLKSSRPNDSSKFFTKIVDCFIAMRAVNDQYL
KEYGVICQDKLVQKEAPIWLAYINAKTVQQGNQEAHSDSVSGEEQTTNEES
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaatacacagagacgtcaccttctgatgatgcaaatgacatgccagtaatgcaa
gtgacagaacatgtcttactggttgataaaaagaatacaaaatatggggctgatgaacaa
gaaaagccagttattatactgccggtcaaaaagaggaaagttgaaactgttaaacgacaa
agggccaaaaatatcggtgtgtcacagaagcagtgtaagctgtcttttccaccatgcagg
gtttgtttgggaccaggaactgggcttcattatggtgtaaatagttgtgagtcctgtaag
tcgttttttcgaaggtgccttactcgaaaagaagagtacaaatgctctaaagataaaaac
tgtccagtgacttcacaagttcgtgggaactgttctgggtgtaggtataaacgatgtctg
gaagttggaatgtctcgggaagctgcttgtctagggcgctatacattgtcgcgtagaact
aagacgataatggaagcgaagggagaggaatatatagagacaaataagttttctcatggt
gctagaaatgacctttccacacgtagcaacagccctggtgatattctgttacagccgtct
cgacaagacattccttttcagtcatcaccaataattgaagtggtgatggacgagaaatca
gaattatctgtaaaagttatcagaccagacatttcacaagcttatctcgaggagcttgaa
ctgattgaaaaactggttgtatcaatggagcaggttcgaccatttggaagtatagtctct
gacatacagataaaggccaagttgaaggaagattatgacaacttcatggctaaggcacaa
gtgtttggcaaaatgaaaccagttcctcaagatgagtacttcgctcttctagaaagtaca
ggaattgacatcgatgggcgtcaggaatttctacggcagtcggccatgtcttgccaacct
gtactccacagttacattgcattcgccaatattgtcccaggtttctcttcgttgtcgctt
gaagatcagtgtagcctattgaagacctcacactttgaagtgttcttatttctgacttac
aaaggttacgaccccaaccttcaaatgatactgacagagactgggaaagcctaccacatt
gaccaagcagctgatatcttctattcccgcaatctcatagattctatatttgatgtgtgc
aagaaaattcaggcattagatctgacgaaagaggagacagctttgttgttggcaatagca
gtgacatttggtgacagatgtcagctggaagattctactaaagttgatgaaattcagctg
agggttgtgcaaatattcaggtcattcttaaaaagctctaggccaaatgattcttcaaag
ttctttaccaaaattgttgactgcttcattgccatgagagcagtcaatgaccagtacttg
aaagaatatggagtgatatgccaagacaagcttgtgcaaaaagaggccccaatatggctg
gcgtatattaacgcaaaaacagtacaacaaggcaaccaagaggcacattcagactcagtt
tctggagaggagcaaactacgaatgaagaaagctag
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