KEGG   Mya arenaria (softshell): 128232849
Entry
128232849         CDS       T09995                                 
Name
(RefSeq) splicing factor 3B subunit 1-like isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
maea  Mya arenaria (softshell)
Pathway
maea03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:maea00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128232849
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:maea03041]
    128232849
   03036 Chromosome and associated proteins [BR:maea03036]
    128232849
Spliceosome [BR:maea03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    128232849
 Complex B
    128232849
 Complex C
   U2 SnRNP specific factors
    128232849
Chromosome and associated proteins [BR:maea03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    128232849
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 XMAP215_CLASP_TOG DUF2298 UNC45-central
Other DBs
NCBI-GeneID: 128232849
NCBI-ProteinID: XP_052802615
LinkDB
Position
1:complement(10617345..10643266)
AA seq 1355 aa
MAAPYQTREDIEEQVRSIQTRKANLNKENVDREGQSPEKQRVGLGAGGHFDTDIYGSQHS
KFEGYHTYIPAEDAEDDDDVNPVETTGPVRAAAPLNALNDSLNDKEYDPLAEHRRQKISD
REDEYRARRRQMIISPERHDPFADGGKTPDPQARTYQQILREKELAQQEKGLKDQMREKA
KAGDLKVVNGSSAAKPSEKKRRWDQPAGGDEPLKKRASTWDQAETGGTPSHGKWDETPGK
TKGSATPGATPGASTRMWDSTPGHATPGAVTPGRETPGQQQATPSARRNRWDETPRASDT
PSHMTPGGHQAGWAETPKTDRGGGDLIEDTPTPATNKRRSRWDETPGAHTPSQMTPGHMT
PSMTPGGHTPGGMTPSGMSGMTTPGGGTPSGFTPGGMTPGGFTPSGSTPTGAKAMAMATP
TPGHLMSMTPEQLQAFTWQREIDERNRPLSDEDLDAMFPPGYKVLQPPTGYIPIRTPARK
LIATPTPMAGTPQGFRMQTPDTKTSVVDMQPKGNLPMMKPDDMQYFDKLLQDVDEEALTP
EEQKERRIMKLLLKIKNGTPPMRKAALRQVTDKAREFGAGPLFNQILPLLMSPTLEDQER
HLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATM
ISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQ
QIAILMGCAILPHLKSLVEIIEHGLVDEQQKVRTITALALAALAEAATPYGIESFDSVLK
PLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVL
KVVKQCCATDGVEPQYIKDNILPPFFKHFWNQRMALDRRNYRQLVDTTVEIANKVGAAEI
IGRVVDDLKDEAEQYRKMVMETIEKVMANLGAADVDSRLEEQLIDGILYAFQEQTTEDVV
MLNGFGTVVNALGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAIVMKTCQEEK
LMGHLGVVLYEYLGEEYPEVLGSILGALKSIVNVIGMTKMTPPIKDLLPRLTPILKNRHE
KVQENCIDLVGRIADRGAEFVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIG
PHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLK
SLSFMFEYIGEMGKDYIYAVTPLFEDALMDRDLVHRQTSMSAIQHMALGVYGFGCEDALV
HLMNYVWPNVFETSPHVVQAFMGAIEGMRVGVGPSKILQYALQGLFHPARKVRDVYWKVY
NTIYIGAQDGMIPAFPRAPNDAKNNFLRYELDYIL
NT seq 4068 nt   +upstreamnt  +downstreamnt
atggccgcgccataccaaactcgagaagacatagaggagcaggtcagatccattcagaca
agaaaagcaaacctaaacaaggaaaatgtggatcgggaaggtcagtctcctgaaaaacag
agggttggtcttggtgcaggtggacacttcgacacagacatctatggttcacagcacagc
aagtttgaaggctaccatacatatatcccagcagaagatgctgaggatgatgatgacgta
aatccagttgaaacaacagggccagttcgagcagctgctccactgaatgcgctaaatgac
tccctcaatgacaaagagtatgaccctctggcagaacacagaagacagaaaatctctgac
agggaagatgaatatcgcgctaggcggagacaaatgatcatctcgccagagcgacacgac
cctttcgccgacggcggcaaaactcctgacccccaggcaagaacataccagcagattctt
cgggagaaagagcttgcacaacaagagaaaggactgaaggaccagatgcgggagaaagcc
aaggctggtgatctgaaagtcgtgaatgggagctctgctgcgaaaccgagtgaaaagaaa
cgtcgctgggaccagcccgcgggcggggatgagcccttaaagaaacgagcctcgacctgg
gaccaggctgagacaggcggcacaccctcacatggcaagtgggatgagacccctggcaaa
actaagggctctgcaaccccaggagccacccctggggctagtacccgaatgtgggattcc
accccaggacatgctacgccaggggctgtaacaccgggtagagagactcctgggcaacag
caggcgacacccagtgcccgtagaaacagatgggatgagacaccaagagcctcagatacc
cctagccatatgacccctgggggtcatcaagctggatgggctgagacacccaaaactgac
agagggggcggggatcttattgaagacacacccaccccagcaaccaacaagcgcagatct
cgctgggatgagaccccaggagcccacacaccctcccagatgactccagggcatatgacc
cctagcatgacccctggaggccatactcccggtggtatgacccctagtggtatgagtgga
atgacgacacccggtggagggacccccagtggcttcacacccggaggaatgacacctggt
gggtttacacccagtggctcaacccccacaggagctaaagccatggcgatggcgaccccc
actccaggtcacctaatgtccatgaccccagaacagcttcaggcttttacctggcagagg
gagattgatgagagaaataggccactcagtgatgaggatctggatgccatgtttcctcca
ggctacaaggtcttacaaccaccgactggctacatccctatccgaacccctgcccggaag
ctgattgccacacccacccccatggcgggcacaccccagggtttcaggatgcagacaccg
gataccaagacttcagttgttgatatgcagcccaaaggtaatctgcccatgatgaaaccg
gacgacatgcagtactttgacaagcttctacaggatgtggatgaggaggcgttgaccccg
gaggaacagaaggagcgccgcatcatgaagctgcttctcaagatcaagaacggaacaccg
cccatgaggaaggctgctctgcgtcaggtgacagacaaggctcgagagttcggtgccggt
cccctgttcaaccagattctgccccttctcatgtcccctacactggaagaccaagagaga
catctccttgttaaggtgatcgaccgtatcctgtacaaattggacgaccttgttcgtccg
tacgtccacaagattcttgtggttattgagcctctccttattgacgaggactactatgcc
cgtgtggaggggagagaaatcatctctaacctggcaaaggctgcaggtctggcaaccatg
atctccacaatgagacctgacattgacaacatggacgaatacgtccgtaacacgactgct
cgagccttcgctgtggtcgcatcagcactgggaattccttcacttctgcctttcctaaag
gctgtgtgtaagagcaagaagtcctggcaggctcgccacacaggtatcaagattgttcaa
cagatcgctatcctcatgggctgcgctattctgccccatcttaaatctcttgtggaaatc
atagaacacggtctagtagatgagcaacagaaagtgcgaaccatcacagctctggctttg
gctgccctggctgaggcagctacaccctacggtattgagtcatttgacagtgttcttaaa
cctctctggaagggtatcaggcagcacagaggaaagggtcttgccgcgttcttgaaagcg
attggttacttgattcctcttatggacgcagaatacgcaaactactacacaagagaagtg
atgttgatcctgatccgagagtttcaatcacccgacgaagaaatgaagaaaattgtgttg
aaggtagtgaagcagtgttgtgcaacagatggtgtggagccacagtacatcaaggacaac
attctcccgccattcttcaagcacttctggaaccagcgtatggccctcgatcgccgcaac
taccgacagctggtggatacaaccgtggagatcgccaacaaagtcggggcggcggaaatt
atcggccgggtcgttgatgacctaaaagacgaggctgaacaatacaggaagatggtcatg
gaaactattgagaaggtaatggcgaatcttggagcagcagatgtagattccagactggaa
gaacagctgattgacggtatactgtatgccttccaggaacagacaactgaggatgtagtg
atgctgaacggtttcggtaccgtcgtgaacgccctgggaaaacgcgtgaagccttacttg
ccccagatttgtggtacgatcctgtggcgactcaacaataagtcagccaaggtgcgacaa
caggcggcggatctcatctcgcgcatcgccattgttatgaagacgtgtcaggaggagaaa
ctgatgggtcatctgggtgtggtactgtacgagtaccttggagaagagtaccctgaagtg
ttgggctcaattcttggtgccctcaagtccattgtgaatgttatcggcatgactaagatg
acgccccctatcaaggatctcttgccgagacttacacccatcctgaaaaacaggcatgag
aaagtccaagaaaactgtatcgacctggtggggcgtatagcggaccgaggcgcggagttt
gtatcggctcgagagtggatgaggatctgttttgagttgcttgaactattgaaggcacac
aagaaggcaatcaggcgagccacagtcaacacatttggttacattgcaaaggctatcggt
ccacatgatgtactagccacacttctcaacaatcttaaagtacaggagcgtcagaaccgt
gtgtgcaccactgtagccatagctatagttgcagaaacgtgttctccgttcacagtactc
cctgcgttaatgaacgagtaccgagtgccagagttgaacgtccagaatggagtacttaaa
tccctgtcgtttatgttcgagtatatcggtgaaatggggaaggattatatttatgctgtg
acacccttgtttgaggatgccttaatggacagagaccttgttcatcgtcagacctccatg
tcagcaatccagcacatggccctcggtgtgtacggttttgggtgtgaagatgcgctagtc
caccttatgaattatgtttggccaaacgtctttgaaacctcccctcatgttgttcaggcg
tttatgggcgcaatagagggcatgcgggtcggtgtaggcccctctaaaatattgcagtat
gctttacagggattatttcaccctgcacgaaaggttcgagatgtttactggaaggtttat
aatacaatttatattggggcccaggacggcatgattcctgcatttcccagggcaccaaat
gatgctaaaaataacttcctgcgatacgaactagactacattttgtaa

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