Mya arenaria (softshell): 128232869
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Entry
128232869 CDS
T09995
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
maea03036
]
128232869
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128232869
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
LIG3_BRCT
ResIII
DEAD
HDA2-3
BRCT_2
BRCT
ERCC3_RAD25_C
AAA_34
SOV1_N
BRCT_3
AAA_22
Motif
Other DBs
NCBI-GeneID:
128232869
NCBI-ProteinID:
XP_052802609
LinkDB
All DBs
Position
4:complement(64714634..64739521)
Genome browser
AA seq
1027 aa
AA seq
DB search
MSDSEENPLDDTEVGAKKYVVKTESLIRYGWGDMSLRPYQLVGVNWMIDRYYRGHGCILG
DEMGLGKTCQTIAVIAYINGKTKAKHPHLVVCPRSVLENWQVEVKRFTPGLRSQVYLGEK
QSRHDLANSIKRDYRQGKLKFDVLISTYEICIKDASFLQSLEWNLLVVDEAHRLKNLDSL
LYKTLSQWDFHTSLLLTGTPIQNNLRELYALLSFVSPKKFPTDHHAIFVNKYSNVTEKAD
DMHHLLRPYLLLRRKNEVLKDLPHKSEIVLTHGISNLQAKLYKGILMKDTELFESNRTGQ
QPTRLMNILMQLRKCVNHPYLFDGVEPEPFALGEHLVTASSKLVVIDKLLAYLKETGHKV
LMFSQMTHMLDILQDYLGYRGYSYERLDGSVRGEERFLAVQSFNKNDDTFIFLLSTRAGG
VGINLTSADTVIFVDSDFNPQNDLQAAARAHRIGQTRPVKIIRLTGRHTVEEIILKRAEE
KLKLSTAVIKEGEFSLGADKTALFTDDKVKLLDILKYGVDELFGDGDEDRDGGDGADSEL
DFRKILGPTADGEWQLEEEETGASGDGEGDEEDEGILEDAPQSMYMFEGTDYSKEPTAAD
KAAFDKMLEAEKAAIEAKVLEDRPSRAKKQSSVFMAGLPDVLRKPRKKLSPEELEQRKKQ
RMEAAERRAKETEEQEMRRAQALRKKKEEMWKKNKYESCNIELDYDEDGDSDDEVAAADD
DDDDDGDVSSRDIKYVSGDVTKPRQTDRIHNIIVHCADDSGNWGKGGLFSAIAARSSLPE
QQYTLAGKMQDLALGDCHLVPVDDETGRKDGHDWLGLIIAQHRDRKNNLSGIKLSALRYG
LEKVYKKAKELTASVHLPRIGHDTPGFNWYGTEKLIKKHLATKGVPTYIYYFPRQHQKRK
GSLSNDAPKVKASRSDADVGPSTSGVGKKAPQGLLDIFSGTAIYLHRPQMPEVQYKNYKR
YILAYNGDVDTSVSSSTSHIVIAQDCDVKAIGEVSGENLDIPVVTTEWLDDCLQKRKLIK
TDDYAID
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacagcgaagaaaacccacttgatgataccgaagttggtgcaaagaagtatgtt
gtgaagacggaaagtctgattcgttatggatggggagatatgagtctgcgtccttatcag
cttgtaggagtaaactggatgatagaccgatactacagaggtcatggctgcatcctggga
gatgagatggggcttgggaaaacatgccagacaatagcggtgatagcctacatcaatggg
aagaccaaggccaagcatccccaccttgtggtgtgtcccagatctgtcctggaaaactgg
caagtggaagtgaaaagatttacccccggcctgcggagccaggtctaccttggagagaag
cagagcagacatgatctggcaaattccatcaagcgtgactacaggcagggaaaactgaaa
tttgatgttctcatctcaacttatgagatctgcataaaggatgcatcatttctacagtcc
ctggaatggaacctgctggttgtggatgaggctcaccggctcaagaacctcgactctctg
ctctataaaacactctcacagtgggacttccacaccagcctcctactaacagggaccccc
atacagaacaacctgcgggaactctacgctctacttagctttgtgtcaccaaagaagttc
cctacagatcaccatgctatatttgtgaataaatactccaatgtcacagaaaaagccgat
gacatgcaccatttgttgaggccgtacctgctgctgcgccgtaagaatgaggtgttgaag
gacctgccccacaagtcagagattgtcctcacacacggaatctccaatctacaggccaaa
ctatacaaaggcattctcatgaaggacacagagttgtttgagagcaacaggactggccaa
cagccgacacgattgatgaacatcctgatgcagcttcgcaagtgtgtcaaccacccctac
ctctttgatggtgttgagcccgagccatttgccctgggtgagcacctcgtgacagctagt
tcaaagcttgtggtgattgacaagctgctggcctacctgaaggagacaggacacaaagtg
ctcatgttctcacagatgacccacatgctggacattctccaggactatcttggctataga
gggtacagctatgagcgtttggacgggtcagtgaggggggaagagcggttcctggctgtc
cagagctttaacaagaatgacgacacattcatcttcctcctcagtacaagggcaggtgga
gtgggtatcaacctgacaagtgcagacacggtgatatttgtggacagtgacttcaaccct
cagaatgacctacaggcagcagctcgtgcacatagaataggacaaacaagaccagtaaag
atcatccggctgacagggcgacacactgtggaggagatcatactgaaaagagcagaagaa
aagttgaaactgtccaccgctgtgattaaagagggagagttttcacttggggctgacaag
acagcactcttcactgatgataaagtcaagctactagacattctgaagtacggtgtggat
gagttgtttggtgatggggacgaggacagggatgggggtgatggtgcagacagtgaactt
gatttccggaagattctgggcccaacagctgacggggagtggcagcttgaggaggaggag
accggggccagtggggatggggagggagacgaggaggatgaaggtattctggaggatgct
cctcagagcatgtacatgtttgagggcacagactactccaaggagccaacagctgctgat
aaagctgcatttgacaaaatgttggaagctgagaaggctgctattgaagcaaaggtattg
gaagaccggccttcccgggccaagaaacagtcttcagttttcatggctggtctgccggat
gttctacgcaaaccgaggaaaaaactttccccagaggaactggaacagagaaaaaaacag
aggatggaggctgctgagcgaagggcaaaggagactgaggaacaggagatgagacgggca
caagctttacgcaagaaaaaggaagaaatgtggaagaagaacaaatatgagtcatgcaat
attgagttggattatgacgaggatggtgacagtgatgatgaagtcgctgctgctgatgat
gatgatgatgatgatggtgatgtgagtagtagggacatcaagtatgtgagtggagatgtc
accaaaccacgacagactgaccgaatccacaacatcatagtgcactgtgctgatgactct
ggtaactggggaaagggaggcttgttttcagccattgctgcacgatcctctctgccagaa
cagcagtacacactcgctggcaagatgcaagatctggccctgggagactgccatctagtt
cctgttgacgacgagacaggcagaaaagatggacatgattggctgggtttgattatagcc
caacatagggacagaaagaacaacctgtcaggaattaaactatctgcactaagatacgga
ctggaaaaggtctacaagaaagccaaggaactcacagcctccgtccatttaccgcgtata
gggcacgatacgccggggtttaactggtatggtactgaaaaattgatcaagaagcattta
gccaccaagggggtaccgacatatatatattactttccaagacaacaccagaagaggaag
ggcagcctatcgaatgatgcaccaaaagtcaaagcttctcggtccgatgctgacgtaggg
ccatctacaagtggagtaggaaagaaggccccccagggtctgctagatatattttcgggc
accgccatatacctacacaggccacagatgccggaagtccagtacaagaactacaagaga
tacatactagcatataacggcgatgttgatacctcggtgagcagttctaccagtcacatt
gtgatcgcccaggattgtgacgtcaaggccattggtgaagtgtcaggcgaaaatctcgac
atcccagtcgtaacaacagaatggctagacgattgtttgcaaaaaaggaaactaataaaa
acagacgactacgcaatagattaa
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