Mya arenaria (softshell): 128233529
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Entry
128233529 CDS
T09995
Name
(RefSeq) non-homologous end-joining factor 1-like
KO
K10980
non-homologous end-joining factor 1
Organism
maea
Mya arenaria (softshell)
Pathway
maea03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
128233529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maea03400
]
128233529
DNA repair and recombination proteins [BR:
maea03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
128233529
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
XLF
XLF_CC
XRCC4
Motif
Other DBs
NCBI-GeneID:
128233529
NCBI-ProteinID:
XP_052803196
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All DBs
Position
5:46963658..46972165
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AA seq
352 aa
AA seq
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MSSEVEWRRRWKPTLNAVPWQPLKVDGTVYLIKYKFSTDAYEILVTDFTHFWYEELSQNA
LKKRVKKLNPGIEAPLTRILDQIKSCLDKTQEDAKTSLKLSYKPDSESGECSVAMAIEST
LAGMPFTWSFLCRPAETRMGSEHLVVPLLAMVCELSRRQQELTKVVQSKDREIEDLKAQG
AKPSRKHIETPKFVETAFEMNMMTSKDFENHMKSCETDAFDVRGQDLYRQVVSKRAWINR
SPTKAGAGEDESLLDDMSSAEGAGPAKGRGSMGGSWGNSRLPPSLQQSRSPNKSPTKTPS
PAKSSKSSNSNTPETSPVKDSEMLRRAALERRLEEEEAKHVGKARKKKKIAF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccgaggtggaatggcggaggagatggaagccgactttgaacgcagttccatgg
caaccactgaaagtagatggaactgtttatttaattaagtacaagttttcaaccgacgcc
tacgaaatacttgtcactgattttacacatttttggtacgaggagttgtcacaaaatgct
ctcaaaaagcgagtaaagaaactaaatccaggcattgaagctccattgacaagaatccta
gatcaaataaagagctgtctggacaaaacacaggaggatgccaaaacatcattaaagttg
tcctacaaaccagacagtgaaagtggagaatgttctgttgctatggcgatagagtccacc
ctggcagggatgccctttacctggagcttcctctgcagaccagctgagaccagaatgggc
agtgagcatctggtcgttccactgctggctatggtgtgtgagctgtcaaggcgccaacag
gagctcaccaaggttgtacagtcaaaggatcgggaaatcgaggacttgaaagcccaggga
gctaaaccttcacgtaaacatatagagacaccaaaatttgtagagacagcttttgagatg
aacatgatgacatccaaggattttgagaaccatatgaagtcatgtgaaactgacgcgttt
gatgtgcgtggtcaggacttgtaccgacaggtggtcagtaaacgagcctggattaacaga
tctcccaccaaagccggggcgggtgaggatgagagccttctggatgacatgtcaagtgcc
gagggggcggggccagccaaggggaggggctcgatgggagggtcctggggcaactctcgc
ctgcccccctccctccagcagtcccgctcgcccaacaagtcacccaccaaaacaccaagc
ccggccaagtcatcaaagtcatccaatagtaacacacctgagacctctcctgttaaggac
tctgagatgttacgccgtgcagccctggagagaaggctggaagaggaagaagctaagcat
gttgggaaggctcgcaagaagaagaaaatcgctttctga
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